RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 LOC110117498A0A087WWA1 95 aa6.68□□□□□ -1.34
AC004540.1-204ENST00000449537 A0A1B0GV72 72 aa6.68□□□□□ -1.34
AC004540.1-204ENST00000449537 LCE2BO14633 110 aa6.68□□□□□ -1.34
AC004540.1-204ENST00000449537 SSBP3-AS1Q7Z2R9 100 aa6.68□□□□□ -1.34
AC004540.1-204ENST00000449537 Q6JHZ5 121 aa6.66□□□□□ -1.34
AC004540.1-204ENST00000449537 Q6Q795 121 aa6.66□□□□□ -1.34
AC004540.1-204ENST00000449537 CCKP06307 115 aa6.65□□□□□ -1.34
AC004540.1-204ENST00000449537 MOBPQ13875 183 aa6.65□□□□□ -1.34
AC004540.1-204ENST00000449537 C9orf153Q5TBE3 101 aa6.65□□□□□ -1.34
AC004540.1-204ENST00000449537 SMIM29Q86T20 159 aa6.65□□□□□ -1.34
AC004540.1-204ENST00000449537 IGLV9-49A0A0B4J1Y8 123 aa6.64□□□□□ -1.35
AC004540.1-204ENST00000449537 Q6ZQT0 140 aa6.63□□□□□ -1.35
AC004540.1-204ENST00000449537 TRBV7-4A0A0J9YYF1 115 aa6.62□□□□□ -1.35
AC004540.1-204ENST00000449537 A0A1B0GW54 56 aa6.61□□□□□ -1.35
AC004540.1-204ENST00000449537 CD164Q04900 197 aa6.61□□□□□ -1.35
AC004540.1-204ENST00000449537 KRTAP20-1Q3LI63 56 aa6.6□□□□□ -1.35
AC004540.1-204ENST00000449537 UBL5Q9BZL1 73 aa6.6□□□□□ -1.35
AC004540.1-204ENST00000449537 RPL37P61927 97 aaKnown RBP6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 KRTAP19-6Q3LI70 58 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 ATP5EP2Q5VTU8 51 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 LINC00643Q86TS7 51 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 SIGMAR1Q99720 223 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 LIMD2Q9BT23 127 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 NEBP20929 6669 aa6.57□□□□□ -1.36
AC004540.1-204ENST00000449537 MT2AP02795 61 aa6.56□□□□□ -1.36
AC004540.1-204ENST00000449537 KRTAP9-3Q9BYQ3 159 aa6.56□□□□□ -1.36
AC004540.1-204ENST00000449537 IGFL1Q6UW32 110 aa6.55□□□□□ -1.36
AC004540.1-204ENST00000449537 Q5XG85 94 aa6.54□□□□□ -1.36
AC004540.1-204ENST00000449537 SS18L2Q9UHA2 77 aa6.53□□□□□ -1.36
AC004540.1-204ENST00000449537 TRBV7-7A0A0K0K1E9 115 aa6.5□□□□□ -1.37
AC004540.1-204ENST00000449537 MT1FP04733 61 aa6.5□□□□□ -1.37
AC004540.1-204ENST00000449537 KRTAP10-10P60014 251 aa6.5□□□□□ -1.37
AC004540.1-204ENST00000449537 NREPQ16612 68 aa6.5□□□□□ -1.37
AC004540.1-204ENST00000449537 Q6ZVQ6 151 aa6.49□□□□□ -1.37
AC004540.1-204ENST00000449537 IMUPQ9GZP8 106 aa6.49□□□□□ -1.37
AC004540.1-204ENST00000449537 A0A1W2PNM2 257 aa6.48□□□□□ -1.37
AC004540.1-204ENST00000449537 MT-ATP8P03928 68 aa6.48□□□□□ -1.37
AC004540.1-204ENST00000449537 SCGB1A1P11684 91 aa6.47□□□□□ -1.37
AC004540.1-204ENST00000449537 CXCL6P80162 114 aa6.46□□□□□ -1.38
AC004540.1-204ENST00000449537 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
AC004540.1-204ENST00000449537 A0A087WSZ3 146 aa6.44□□□□□ -1.38
AC004540.1-204ENST00000449537 IGKV3D-7A0A0C4DH55 119 aa6.44□□□□□ -1.38
AC004540.1-204ENST00000449537 BPY2O14599 106 aa6.44□□□□□ -1.38
AC004540.1-204ENST00000449537 HIST1H4AP62805 103 aaKnown RBP6.42□□□□□ -1.38
AC004540.1-204ENST00000449537 A0A0G2JQZ4 141 aa6.41□□□□□ -1.38
AC004540.1-204ENST00000449537 J3KT08 172 aa6.4□□□□□ -1.38
AC004540.1-204ENST00000449537 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
AC004540.1-204ENST00000449537 C1orf195Q5TG92 126 aa6.36□□□□□ -1.39
AC004540.1-204ENST00000449537 FAM236AA0A1B0GUQ0 79 aa6.35□□□□□ -1.39
AC004540.1-204ENST00000449537 FAM236BA0A1B0GV22 79 aa6.35□□□□□ -1.39
AC004540.1-204ENST00000449537 NDUFB1O75438 58 aa6.35□□□□□ -1.39
AC004540.1-204ENST00000449537 ATOX1O00244 68 aa6.33□□□□□ -1.4
AC004540.1-204ENST00000449537 Q96NJ1 140 aa6.33□□□□□ -1.4
AC004540.1-204ENST00000449537 LINC00472Q9H8W2 130 aa6.33□□□□□ -1.4
AC004540.1-204ENST00000449537 MUC12Q9UKN1 5478 aa6.32□□□□□ -1.4
AC004540.1-204ENST00000449537 A8MWP4 228 aa6.31□□□□□ -1.4
AC004540.1-204ENST00000449537 A0A087WVE0 104 aa6.3□□□□□ -1.4
AC004540.1-204ENST00000449537 IGKV4-1P06312 121 aa6.3□□□□□ -1.4
AC004540.1-204ENST00000449537 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
AC004540.1-204ENST00000449537 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
AC004540.1-204ENST00000449537 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
AC004540.1-204ENST00000449537 K7EQZ3 153 aa6.27□□□□□ -1.41
AC004540.1-204ENST00000449537 PCP4P48539 62 aa6.27□□□□□ -1.41
AC004540.1-204ENST00000449537 DSCR10P59022 87 aa6.27□□□□□ -1.41
AC004540.1-204ENST00000449537 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
AC004540.1-204ENST00000449537 Q8N9L7 120 aa6.27□□□□□ -1.41
AC004540.1-204ENST00000449537 HCG22E2RYF7 251 aa6.26□□□□□ -1.41
AC004540.1-204ENST00000449537 C8orf87E5RJ46 101 aa6.26□□□□□ -1.41
AC004540.1-204ENST00000449537 Q75L30 129 aa6.26□□□□□ -1.41
AC004540.1-204ENST00000449537 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
AC004540.1-204ENST00000449537 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
AC004540.1-204ENST00000449537 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
AC004540.1-204ENST00000449537 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
AC004540.1-204ENST00000449537 FAM236DA0A1B0GTK5 79 aa6.23□□□□□ -1.41
AC004540.1-204ENST00000449537 FAM236CP0DP71 79 aa6.23□□□□□ -1.41
AC004540.1-204ENST00000449537 CASC2Q6XLA1 102 aa6.21□□□□□ -1.42
AC004540.1-204ENST00000449537 IGHV6-1A0A0B4J1U7 121 aa6.2□□□□□ -1.42
AC004540.1-204ENST00000449537 WFDC13Q8IUB5 93 aa6.2□□□□□ -1.42
AC004540.1-204ENST00000449537 SERP2Q8N6R1 65 aa6.2□□□□□ -1.42
AC004540.1-204ENST00000449537 TRAV7A0A075B6U4 112 aa6.19□□□□□ -1.42
AC004540.1-204ENST00000449537 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
AC004540.1-204ENST00000449537 hDV103S1A0JD37 113 aa6.18□□□□□ -1.42
AC004540.1-204ENST00000449537 LINC00313P59037 77 aa6.18□□□□□ -1.42
AC004540.1-204ENST00000449537 MMP24-AS1A0A0U1RRL7 71 aa6.17□□□□□ -1.42
AC004540.1-204ENST00000449537 UQCRQO14949 82 aa6.17□□□□□ -1.42
AC004540.1-204ENST00000449537 COX7CP15954 63 aa6.17□□□□□ -1.42
AC004540.1-204ENST00000449537 TMEM254Q8TBM7 123 aa6.16□□□□□ -1.42
AC004540.1-204ENST00000449537 KMT2DO14686 5537 aa6.15□□□□□ -1.43
AC004540.1-204ENST00000449537 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
AC004540.1-204ENST00000449537 MRPL34Q9BQ48 92 aaKnown RBP6.12□□□□□ -1.43
AC004540.1-204ENST00000449537 RBM12B-AS1Q9P1G2 102 aa6.12□□□□□ -1.43
AC004540.1-204ENST00000449537 KRTAP16-1A8MUX0 517 aa6.11□□□□□ -1.43
AC004540.1-204ENST00000449537 NDUFS5O43920 106 aa6.11□□□□□ -1.43
AC004540.1-204ENST00000449537 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
AC004540.1-204ENST00000449537 OCR1Q9BZK8 76 aa6.11□□□□□ -1.43
AC004540.1-204ENST00000449537 A8MUU9 505 aa6.1□□□□□ -1.43
AC004540.1-204ENST00000449537 MP68P56378 58 aa6.1□□□□□ -1.43
AC004540.1-204ENST00000449537 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
AC004540.1-204ENST00000449537 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
AC004540.1-204ENST00000449537 H3BPC8 53 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms