RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
FAM3A-215ENST00000447601 PKHD1P08F94 4074 aa11.32□□□□□ -0.6
FAM3A-215ENST00000447601 SERP1Q9Y6X1 66 aa11.32□□□□□ -0.6
FAM3A-215ENST00000447601 LINC00208Q96KT6 92 aa11.3□□□□□ -0.6
FAM3A-215ENST00000447601 MRPL34Q9BQ48 92 aaKnown RBP11.3□□□□□ -0.6
FAM3A-215ENST00000447601 RYR2Q92736 4967 aa11.29□□□□□ -0.6
FAM3A-215ENST00000447601 TRAV22A0A0B4J277 110 aa11.29□□□□□ -0.6
FAM3A-215ENST00000447601 LIMD2Q9BT23 127 aa11.29□□□□□ -0.6
FAM3A-215ENST00000447601 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
FAM3A-215ENST00000447601 DYNC1H1Q14204 4646 aaKnown RBP11.28□□□□□ -0.6
FAM3A-215ENST00000447601 SMR3BP02814 79 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-215ENST00000447601 NOTCH2NLQ7Z3S9 236 aa11.26□□□□□ -0.61
FAM3A-215ENST00000447601 C8orf87E5RJ46 101 aa11.25□□□□□ -0.61
FAM3A-215ENST00000447601 OXTP01178 125 aa11.25□□□□□ -0.61
FAM3A-215ENST00000447601 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
FAM3A-215ENST00000447601 NDUFS5O43920 106 aa11.25□□□□□ -0.61
FAM3A-215ENST00000447601 C1orf195Q5TG92 126 aa11.25□□□□□ -0.61
FAM3A-215ENST00000447601 C1orf64Q8NEQ6 169 aa11.22□□□□□ -0.61
FAM3A-215ENST00000447601 SPINK1P00995 79 aa11.21□□□□□ -0.62
FAM3A-215ENST00000447601 KRTAP10-4P60372 401 aaPredicted RBP11.16□□□□□ -0.62
FAM3A-215ENST00000447601 PRR26Q8N8Z3 221 aa11.16□□□□□ -0.62
FAM3A-215ENST00000447601 LINC00313P59037 77 aa11.16□□□□□ -0.62
FAM3A-215ENST00000447601 KMT2CQ8NEZ4 4911 aaKnown RBP11.15□□□□□ -0.62
FAM3A-215ENST00000447601 APOBP04114 4563 aaKnown RBP11.14□□□□□ -0.63
FAM3A-215ENST00000447601 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
FAM3A-215ENST00000447601 SPAG11AQ6PDA7 123 aa11.14□□□□□ -0.63
FAM3A-215ENST00000447601 LINC00304Q8N9R0 145 aa11.14□□□□□ -0.63
FAM3A-215ENST00000447601 CYP4F30PQ9H0H9 118 aa11.12□□□□□ -0.63
FAM3A-215ENST00000447601 SPANXA2-OT1Q8N9U9 137 aa11.12□□□□□ -0.63
FAM3A-215ENST00000447601 SMIM26A0A096LP01 95 aa11.07□□□□□ -0.64
FAM3A-215ENST00000447601 PRR4Q16378 134 aa11.05□□□□□ -0.64
FAM3A-215ENST00000447601 Q8N9P0 234 aaPredicted RBP11.05□□□□□ -0.64
FAM3A-215ENST00000447601 LOC101927531A0A1B0GV80 90 aa11.02□□□□□ -0.64
FAM3A-215ENST00000447601 KRTAP13-3Q3SY46 172 aa11.02□□□□□ -0.64
FAM3A-215ENST00000447601 FAT1Q14517 4588 aa11.02□□□□□ -0.65
FAM3A-215ENST00000447601 Q5W150 140 aa11.02□□□□□ -0.65
FAM3A-215ENST00000447601 KRTAP16-1A8MUX0 517 aa11.01□□□□□ -0.65
FAM3A-215ENST00000447601 FAM229AH3BQW9 127 aa11□□□□□ -0.65
FAM3A-215ENST00000447601 PCOTHQ58A44 107 aa11□□□□□ -0.65
FAM3A-215ENST00000447601 IGLV7-46A0A075B6I9 117 aa10.99□□□□□ -0.65
FAM3A-215ENST00000447601 FP248Q71RG6 208 aaPredicted RBP10.96□□□□□ -0.65
FAM3A-215ENST00000447601 C4orf26Q17RF5 130 aa10.9□□□□□ -0.66
FAM3A-215ENST00000447601 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
FAM3A-215ENST00000447601 Q5VSD8 79 aa10.87□□□□□ -0.67
FAM3A-215ENST00000447601 RYR3Q15413 4870 aa10.87□□□□□ -0.67
FAM3A-215ENST00000447601 RETNLBQ9BQ08 111 aa10.86□□□□□ -0.67
FAM3A-215ENST00000447601 IGKV2-30P06310 120 aa10.83□□□□□ -0.68
FAM3A-215ENST00000447601 MPLKIPQ8TAP9 179 aa10.83□□□□□ -0.68
FAM3A-215ENST00000447601 COA5Q86WW8 74 aa10.8□□□□□ -0.68
FAM3A-215ENST00000447601 Q1T7F1 81 aa10.77□□□□□ -0.69
FAM3A-215ENST00000447601 HSPG2P98160 4391 aa10.76□□□□□ -0.69
FAM3A-215ENST00000447601 HRES1P13985 223 aa10.74□□□□□ -0.69
FAM3A-215ENST00000447601 KRTAP10-8P60410 259 aa10.74□□□□□ -0.69
FAM3A-215ENST00000447601 RYR1P21817 5038 aa10.74□□□□□ -0.69
FAM3A-215ENST00000447601 Q8N1X5 172 aa10.73□□□□□ -0.69
FAM3A-215ENST00000447601 C9orf92A6NGG3 77 aa10.72□□□□□ -0.69
FAM3A-215ENST00000447601 IGKV2D-30A0A075B6S6 120 aa10.71□□□□□ -0.69
FAM3A-215ENST00000447601 SVIPQ8NHG7 77 aa10.71□□□□□ -0.69
FAM3A-215ENST00000447601 V9GYY9 64 aa10.71□□□□□ -0.69
FAM3A-215ENST00000447601 C20orf166-AS1Q96NR2 134 aa10.7□□□□□ -0.7
FAM3A-215ENST00000447601 A8MUU9 505 aa10.68□□□□□ -0.7
FAM3A-215ENST00000447601 DMAC1Q96GE9 116 aa10.67□□□□□ -0.7
FAM3A-215ENST00000447601 ACYP2P14621 99 aa10.66□□□□□ -0.7
FAM3A-215ENST00000447601 C7orf65Q6ZTY9 151 aa10.64□□□□□ -0.71
FAM3A-215ENST00000447601 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
FAM3A-215ENST00000447601 KRTAP17-1Q9BYP8 105 aa10.61□□□□□ -0.71
FAM3A-215ENST00000447601 TNXBP22105 4242 aa10.6□□□□□ -0.71
FAM3A-215ENST00000447601 LRP1Q07954 4544 aaKnown RBP10.58□□□□□ -0.72
FAM3A-215ENST00000447601 PSPHP1O15172 72 aa10.56□□□□□ -0.72
FAM3A-215ENST00000447601 KIAA1109Q2LD37 5005 aa10.55□□□□□ -0.72
FAM3A-215ENST00000447601 Q75L30 129 aa10.55□□□□□ -0.72
FAM3A-215ENST00000447601 CHKB-CPT1BH3BT56 60 aa10.53□□□□□ -0.72
FAM3A-215ENST00000447601 FAT3Q8TDW7 4589 aa10.52□□□□□ -0.73
FAM3A-215ENST00000447601 A8MUN3 132 aa10.51□□□□□ -0.73
FAM3A-215ENST00000447601 MT1HL1P0DM35 61 aa10.49□□□□□ -0.73
FAM3A-215ENST00000447601 EPPK1P58107 5090 aaKnown RBP10.48□□□□□ -0.73
FAM3A-215ENST00000447601 PRR15LQ9BU68 103 aa10.48□□□□□ -0.73
FAM3A-215ENST00000447601 LINC01558Q9Y6Z2 57 aa10.48□□□□□ -0.73
FAM3A-215ENST00000447601 Q5VV11 94 aa10.45□□□□□ -0.74
FAM3A-215ENST00000447601 BRK1Q8WUW1 75 aa10.43□□□□□ -0.74
FAM3A-215ENST00000447601 SPINK7P58062 85 aa10.42□□□□□ -0.74
FAM3A-215ENST00000447601 PRO0628Q9UI54 55 aa10.4□□□□□ -0.74
FAM3A-215ENST00000447601 ATP11AUNQ6ZP68 121 aa10.39□□□□□ -0.75
FAM3A-215ENST00000447601 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
FAM3A-215ENST00000447601 MYCBP2O75592 4640 aa10.35□□□□□ -0.75
FAM3A-215ENST00000447601 DMBT1Q9UGM3 2413 aaPredicted RBP10.35□□□□□ -0.75
FAM3A-215ENST00000447601 XP32Q5T750 250 aa10.35□□□□□ -0.75
FAM3A-215ENST00000447601 BIRC6Q9NR09 4857 aa10.33□□□□□ -0.76
FAM3A-215ENST00000447601 A6NED7 52 aa10.24□□□□□ -0.77
FAM3A-215ENST00000447601 KRTAP4-5Q9BYR2 181 aa10.24□□□□□ -0.77
FAM3A-215ENST00000447601 KRTAP3-1Q9BYR8 98 aa10.23□□□□□ -0.77
FAM3A-215ENST00000447601 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
FAM3A-215ENST00000447601 A0A1B0GU69 56 aa10.21□□□□□ -0.77
FAM3A-215ENST00000447601 COX6B2Q6YFQ2 88 aa10.21□□□□□ -0.77
FAM3A-215ENST00000447601 TPRXLQ17RH7 258 aa10.2□□□□□ -0.78
FAM3A-215ENST00000447601 CDC42SE1Q9NRR8 79 aa10.11□□□□□ -0.79
FAM3A-215ENST00000447601 LCA10Q71F78 164 aa10.1□□□□□ -0.79
FAM3A-215ENST00000447601 A8MU10 97 aa10.07□□□□□ -0.8
FAM3A-215ENST00000447601 HERC2O95714 4834 aa10.06□□□□□ -0.8
FAM3A-215ENST00000447601 SEC61GP60059 68 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms