RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
SNX13-204ENST00000444712 ATP5EP56381 51 aaPredicted RBP9.09□□□□□ -0.95
SNX13-204ENST00000444712 C8orf87E5RJ46 101 aa9.08□□□□□ -0.96
SNX13-204ENST00000444712 SPINK1P00995 79 aa9.07□□□□□ -0.96
SNX13-204ENST00000444712 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
SNX13-204ENST00000444712 RPS28P62857 69 aaKnown RBP9.05□□□□□ -0.96
SNX13-204ENST00000444712 ZCCHC13Q8WW36 166 aaKnown RBP9.05□□□□□ -0.96
SNX13-204ENST00000444712 RPS29P62273 56 aaKnown RBP9.04□□□□□ -0.96
SNX13-204ENST00000444712 SPAG11AQ6PDA7 123 aa9.04□□□□□ -0.96
SNX13-204ENST00000444712 H0Y9P7 68 aa9.04□□□□□ -0.96
SNX13-204ENST00000444712 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
SNX13-204ENST00000444712 VPS13BQ7Z7G8 4022 aa9.03□□□□□ -0.96
SNX13-204ENST00000444712 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
SNX13-204ENST00000444712 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
SNX13-204ENST00000444712 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
SNX13-204ENST00000444712 RYR2Q92736 4967 aa9.01□□□□□ -0.97
SNX13-204ENST00000444712 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
SNX13-204ENST00000444712 NDUFS5O43920 106 aa9□□□□□ -0.97
SNX13-204ENST00000444712 PRR26Q8N8Z3 221 aa9□□□□□ -0.97
SNX13-204ENST00000444712 LINC00208Q96KT6 92 aa8.99□□□□□ -0.97
SNX13-204ENST00000444712 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
SNX13-204ENST00000444712 DYNC1H1Q14204 4646 aaKnown RBP8.97□□□□□ -0.97
SNX13-204ENST00000444712 LINC00313P59037 77 aa8.97□□□□□ -0.97
SNX13-204ENST00000444712 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
SNX13-204ENST00000444712 SERP1Q9Y6X1 66 aa8.97□□□□□ -0.97
SNX13-204ENST00000444712 C1orf64Q8NEQ6 169 aa8.95□□□□□ -0.98
SNX13-204ENST00000444712 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
SNX13-204ENST00000444712 APOBP04114 4563 aaKnown RBP8.9□□□□□ -0.98
SNX13-204ENST00000444712 Q8N9P0 234 aaPredicted RBP8.88□□□□□ -0.99
SNX13-204ENST00000444712 SPANXA2-OT1Q8N9U9 137 aa8.88□□□□□ -0.99
SNX13-204ENST00000444712 CYP4F30PQ9H0H9 118 aa8.85□□□□□ -0.99
SNX13-204ENST00000444712 Q5VSD8 79 aa8.85□□□□□ -0.99
SNX13-204ENST00000444712 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
SNX13-204ENST00000444712 KRTAP16-1A8MUX0 517 aa8.83□□□□□ -1
SNX13-204ENST00000444712 RYR3Q15413 4870 aa8.83□□□□□ -1
SNX13-204ENST00000444712 OXTP01178 125 aa8.82□□□□□ -1
SNX13-204ENST00000444712 KRTAP13-3Q3SY46 172 aa8.8□□□□□ -1
SNX13-204ENST00000444712 Q5W150 140 aa8.78□□□□□ -1
SNX13-204ENST00000444712 SMIM26A0A096LP01 95 aa8.76□□□□□ -1.01
SNX13-204ENST00000444712 IGLV7-46A0A075B6I9 117 aa8.76□□□□□ -1.01
SNX13-204ENST00000444712 PKHD1L1Q86WI1 4243 aa8.75□□□□□ -1.01
SNX13-204ENST00000444712 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
SNX13-204ENST00000444712 PRR4Q16378 134 aa8.73□□□□□ -1.01
SNX13-204ENST00000444712 FAT1Q14517 4588 aa8.73□□□□□ -1.01
SNX13-204ENST00000444712 KRTAP10-8P60410 259 aa8.71□□□□□ -1.01
SNX13-204ENST00000444712 Q8N1X5 172 aa8.68□□□□□ -1.02
SNX13-204ENST00000444712 IGKV2-30P06310 120 aa8.68□□□□□ -1.02
SNX13-204ENST00000444712 RETNLBQ9BQ08 111 aa8.65□□□□□ -1.02
SNX13-204ENST00000444712 HSPG2P98160 4391 aa8.63□□□□□ -1.03
SNX13-204ENST00000444712 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
SNX13-204ENST00000444712 FP248Q71RG6 208 aaPredicted RBP8.62□□□□□ -1.03
SNX13-204ENST00000444712 A8MUU9 505 aa8.61□□□□□ -1.03
SNX13-204ENST00000444712 C9orf92A6NGG3 77 aa8.61□□□□□ -1.03
SNX13-204ENST00000444712 FLG2Q5D862 2391 aaPredicted RBP8.6□□□□□ -1.03
SNX13-204ENST00000444712 COA5Q86WW8 74 aa8.58□□□□□ -1.04
SNX13-204ENST00000444712 HRES1P13985 223 aa8.58□□□□□ -1.04
SNX13-204ENST00000444712 IGKV2D-30A0A075B6S6 120 aa8.57□□□□□ -1.04
SNX13-204ENST00000444712 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
SNX13-204ENST00000444712 RYR1P21817 5038 aa8.55□□□□□ -1.04
SNX13-204ENST00000444712 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
SNX13-204ENST00000444712 V9GYY9 64 aa8.54□□□□□ -1.04
SNX13-204ENST00000444712 ACYP2P14621 99 aa8.54□□□□□ -1.04
SNX13-204ENST00000444712 C4orf26Q17RF5 130 aa8.53□□□□□ -1.04
SNX13-204ENST00000444712 Q1T7F1 81 aa8.53□□□□□ -1.04
SNX13-204ENST00000444712 Q75L30 129 aa8.53□□□□□ -1.04
SNX13-204ENST00000444712 MPLKIPQ8TAP9 179 aa8.53□□□□□ -1.04
SNX13-204ENST00000444712 DMAC1Q96GE9 116 aa8.53□□□□□ -1.04
SNX13-204ENST00000444712 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.05
SNX13-204ENST00000444712 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
SNX13-204ENST00000444712 TNXBP22105 4242 aa8.48□□□□□ -1.05
SNX13-204ENST00000444712 BIRC6Q9NR09 4857 aa8.48□□□□□ -1.05
SNX13-204ENST00000444712 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
SNX13-204ENST00000444712 A8MUN3 132 aa8.41□□□□□ -1.06
SNX13-204ENST00000444712 CHKB-CPT1BH3BT56 60 aa8.41□□□□□ -1.06
SNX13-204ENST00000444712 FAT3Q8TDW7 4589 aa8.41□□□□□ -1.06
SNX13-204ENST00000444712 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.06
SNX13-204ENST00000444712 KIAA1109Q2LD37 5005 aa8.4□□□□□ -1.07
SNX13-204ENST00000444712 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
SNX13-204ENST00000444712 SPINK7P58062 85 aa8.36□□□□□ -1.07
SNX13-204ENST00000444712 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
SNX13-204ENST00000444712 XP32Q5T750 250 aa8.35□□□□□ -1.07
SNX13-204ENST00000444712 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
SNX13-204ENST00000444712 PSPHP1O15172 72 aa8.32□□□□□ -1.08
SNX13-204ENST00000444712 TPRXLQ17RH7 258 aa8.3□□□□□ -1.08
SNX13-204ENST00000444712 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
SNX13-204ENST00000444712 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
SNX13-204ENST00000444712 Q5VV11 94 aa8.25□□□□□ -1.09
SNX13-204ENST00000444712 SPTSSBQ8NFR3 76 aa8.23□□□□□ -1.09
SNX13-204ENST00000444712 COX6B2Q6YFQ2 88 aa8.22□□□□□ -1.09
SNX13-204ENST00000444712 MYCBP2O75592 4640 aa8.2□□□□□ -1.1
SNX13-204ENST00000444712 J3QL48 77 aa8.2□□□□□ -1.1
SNX13-204ENST00000444712 BRK1Q8WUW1 75 aa8.2□□□□□ -1.1
SNX13-204ENST00000444712 HERC2O95714 4834 aa8.18□□□□□ -1.1
SNX13-204ENST00000444712 PRO0628Q9UI54 55 aa8.17□□□□□ -1.1
SNX13-204ENST00000444712 KRTAP3-1Q9BYR8 98 aa8.16□□□□□ -1.1
SNX13-204ENST00000444712 A0A1B0GU69 56 aa8.13□□□□□ -1.11
SNX13-204ENST00000444712 A6NED7 52 aa8.1□□□□□ -1.11
SNX13-204ENST00000444712 SEC61GP60059 68 aa8.06□□□□□ -1.12
SNX13-204ENST00000444712 SVIPQ8NHG7 77 aa8.05□□□□□ -1.12
SNX13-204ENST00000444712 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms