RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KRTAP13-1Q8IUC0 172 aa4.43□□□□□ -1.7
CDC42BPA-208ENST00000442054 CD164Q04900 197 aa4.43□□□□□ -1.7
CDC42BPA-208ENST00000442054 RETNLBQ9BQ08 111 aa4.43□□□□□ -1.7
CDC42BPA-208ENST00000442054 LIMD2Q9BT23 127 aa4.43□□□□□ -1.7
CDC42BPA-208ENST00000442054 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
CDC42BPA-208ENST00000442054 K7EQZ3 153 aa4.42□□□□□ -1.7
CDC42BPA-208ENST00000442054 IGFL1Q6UW32 110 aa4.42□□□□□ -1.7
CDC42BPA-208ENST00000442054 A0A0G2JQZ4 141 aa4.41□□□□□ -1.7
CDC42BPA-208ENST00000442054 IGLV7-46A0A075B6I9 117 aa4.4□□□□□ -1.7
CDC42BPA-208ENST00000442054 ASB16-AS1Q495Z4 193 aa4.4□□□□□ -1.7
CDC42BPA-208ENST00000442054 SMIM26A0A096LP01 95 aa4.39□□□□□ -1.71
CDC42BPA-208ENST00000442054 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
CDC42BPA-208ENST00000442054 BIRC6Q9NR09 4857 aa4.39□□□□□ -1.71
CDC42BPA-208ENST00000442054 KIAA1109Q2LD37 5005 aa4.39□□□□□ -1.71
CDC42BPA-208ENST00000442054 RYR2Q92736 4967 aa4.39□□□□□ -1.71
CDC42BPA-208ENST00000442054 hDV103S1A0JD37 113 aa4.38□□□□□ -1.71
CDC42BPA-208ENST00000442054 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
CDC42BPA-208ENST00000442054 Q96NJ1 140 aa4.37□□□□□ -1.71
CDC42BPA-208ENST00000442054 CYP4F30PQ9H0H9 118 aa4.37□□□□□ -1.71
CDC42BPA-208ENST00000442054 SACSQ9NZJ4 4579 aa4.37□□□□□ -1.71
CDC42BPA-208ENST00000442054 RYR3Q15413 4870 aa4.37□□□□□ -1.71
CDC42BPA-208ENST00000442054 SPINK1P00995 79 aa4.36□□□□□ -1.71
CDC42BPA-208ENST00000442054 PMAIP1Q13794 54 aa4.36□□□□□ -1.71
CDC42BPA-208ENST00000442054 HYDINQ4G0P3 5121 aa4.35□□□□□ -1.71
CDC42BPA-208ENST00000442054 HCG22E2RYF7 251 aa4.35□□□□□ -1.71
CDC42BPA-208ENST00000442054 LRP1BQ9NZR2 4599 aa4.34□□□□□ -1.71
CDC42BPA-208ENST00000442054 VPS13BQ7Z7G8 4022 aa4.34□□□□□ -1.72
CDC42BPA-208ENST00000442054 A0A087X002 238 aa4.34□□□□□ -1.72
CDC42BPA-208ENST00000442054 Q1T7F1 81 aa4.34□□□□□ -1.72
CDC42BPA-208ENST00000442054 C1orf64Q8NEQ6 169 aa4.33□□□□□ -1.72
CDC42BPA-208ENST00000442054 NDUFB1O75438 58 aa4.33□□□□□ -1.72
CDC42BPA-208ENST00000442054 LINC00483Q53H64 154 aa4.32□□□□□ -1.72
CDC42BPA-208ENST00000442054 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
CDC42BPA-208ENST00000442054 TRAV22A0A0B4J277 110 aa4.31□□□□□ -1.72
CDC42BPA-208ENST00000442054 PKHD1L1Q86WI1 4243 aa4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 MMP24-AS1A0A0U1RRL7 71 aa4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 A0A087WSZ3 146 aa4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 LORP23490 312 aaPredicted RBP4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 DEFB116Q30KQ4 102 aa4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
CDC42BPA-208ENST00000442054 Q75L30 129 aa4.29□□□□□ -1.72
CDC42BPA-208ENST00000442054 A8MWP4 228 aa4.29□□□□□ -1.72
CDC42BPA-208ENST00000442054 NDUFS5O43920 106 aa4.29□□□□□ -1.72
CDC42BPA-208ENST00000442054 SPANXA2-OT1Q8N9U9 137 aa4.28□□□□□ -1.72
CDC42BPA-208ENST00000442054 KRTAP17-1Q9BYP8 105 aa4.28□□□□□ -1.72
CDC42BPA-208ENST00000442054 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.72
CDC42BPA-208ENST00000442054 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
CDC42BPA-208ENST00000442054 RBM12B-AS1Q9P1G2 102 aa4.27□□□□□ -1.73
CDC42BPA-208ENST00000442054 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
CDC42BPA-208ENST00000442054 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
CDC42BPA-208ENST00000442054 H3BPC8 53 aa4.26□□□□□ -1.73
CDC42BPA-208ENST00000442054 ATP11AUNQ6ZP68 121 aa4.26□□□□□ -1.73
CDC42BPA-208ENST00000442054 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
CDC42BPA-208ENST00000442054 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
CDC42BPA-208ENST00000442054 RYR1P21817 5038 aa4.24□□□□□ -1.73
CDC42BPA-208ENST00000442054 BRK1Q8WUW1 75 aa4.24□□□□□ -1.73
CDC42BPA-208ENST00000442054 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
CDC42BPA-208ENST00000442054 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
CDC42BPA-208ENST00000442054 WFDC13Q8IUB5 93 aa4.23□□□□□ -1.73
CDC42BPA-208ENST00000442054 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
CDC42BPA-208ENST00000442054 IGHV6-1A0A0B4J1U7 121 aa4.23□□□□□ -1.73
CDC42BPA-208ENST00000442054 A6NN06 94 aa4.23□□□□□ -1.73
CDC42BPA-208ENST00000442054 MPLKIPQ8TAP9 179 aa4.23□□□□□ -1.73
CDC42BPA-208ENST00000442054 APOBP04114 4563 aaKnown RBP4.22□□□□□ -1.73
CDC42BPA-208ENST00000442054 Q5VV11 94 aa4.22□□□□□ -1.73
CDC42BPA-208ENST00000442054 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
CDC42BPA-208ENST00000442054 Q8N9P0 234 aaPredicted RBP4.21□□□□□ -1.74
CDC42BPA-208ENST00000442054 HERC2O95714 4834 aa4.21□□□□□ -1.74
CDC42BPA-208ENST00000442054 H0Y9P7 68 aa4.21□□□□□ -1.74
CDC42BPA-208ENST00000442054 NOTCH2NLQ7Z3S9 236 aa4.21□□□□□ -1.74
CDC42BPA-208ENST00000442054 FAT1Q14517 4588 aa4.2□□□□□ -1.74
CDC42BPA-208ENST00000442054 A8MU10 97 aa4.2□□□□□ -1.74
CDC42BPA-208ENST00000442054 M0R2T5 61 aa4.2□□□□□ -1.74
CDC42BPA-208ENST00000442054 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
CDC42BPA-208ENST00000442054 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
CDC42BPA-208ENST00000442054 C8orf87E5RJ46 101 aa4.19□□□□□ -1.74
CDC42BPA-208ENST00000442054 KRTAP10-4P60372 401 aaPredicted RBP4.19□□□□□ -1.74
CDC42BPA-208ENST00000442054 LOC101927531A0A1B0GV80 90 aa4.18□□□□□ -1.74
CDC42BPA-208ENST00000442054 C8orf17Q9NRJ1 99 aa4.18□□□□□ -1.74
CDC42BPA-208ENST00000442054 LINC00313P59037 77 aa4.17□□□□□ -1.74
CDC42BPA-208ENST00000442054 A0A1B0GVX0 72 aa4.16□□□□□ -1.74
CDC42BPA-208ENST00000442054 MP68P56378 58 aa4.16□□□□□ -1.74
CDC42BPA-208ENST00000442054 A8MUN3 132 aa4.15□□□□□ -1.75
CDC42BPA-208ENST00000442054 Q5W150 140 aa4.15□□□□□ -1.75
CDC42BPA-208ENST00000442054 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
CDC42BPA-208ENST00000442054 COA5Q86WW8 74 aa4.13□□□□□ -1.75
CDC42BPA-208ENST00000442054 PSPHP1O15172 72 aa4.13□□□□□ -1.75
CDC42BPA-208ENST00000442054 LCA10Q71F78 164 aa4.13□□□□□ -1.75
CDC42BPA-208ENST00000442054 KRTAP16-1A8MUX0 517 aa4.12□□□□□ -1.75
CDC42BPA-208ENST00000442054 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
CDC42BPA-208ENST00000442054 HRES1P13985 223 aa4.12□□□□□ -1.75
CDC42BPA-208ENST00000442054 RPS29P62273 56 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-208ENST00000442054 MRPL34Q9BQ48 92 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-208ENST00000442054 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
CDC42BPA-208ENST00000442054 TNXBP22105 4242 aa4.11□□□□□ -1.75
CDC42BPA-208ENST00000442054 HSPG2P98160 4391 aa4.11□□□□□ -1.75
CDC42BPA-208ENST00000442054 TPRXLQ17RH7 258 aa4.1□□□□□ -1.75
CDC42BPA-208ENST00000442054 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
CDC42BPA-208ENST00000442054 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
CDC42BPA-208ENST00000442054 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms