RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 SACSQ9NZJ4 4579 aa8.03□□□□□ -1.12
ACTN4-204ENST00000440400 KRTAP10-2P60368 255 aa8.02□□□□□ -1.13
ACTN4-204ENST00000440400 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
ACTN4-204ENST00000440400 LIMD2Q9BT23 127 aa8.02□□□□□ -1.13
ACTN4-204ENST00000440400 MP68P56378 58 aa8.01□□□□□ -1.13
ACTN4-204ENST00000440400 NDUFB1O75438 58 aa8□□□□□ -1.13
ACTN4-204ENST00000440400 IGFL1Q6UW32 110 aa8□□□□□ -1.13
ACTN4-204ENST00000440400 PSORS1C2Q9UIG4 136 aa8□□□□□ -1.13
ACTN4-204ENST00000440400 RPL37AP61513 92 aaKnown RBP7.98□□□□□ -1.13
ACTN4-204ENST00000440400 MOBPQ13875 183 aa7.96□□□□□ -1.13
ACTN4-204ENST00000440400 ZNF861PO60384 105 aa7.96□□□□□ -1.14
ACTN4-204ENST00000440400 SRRM2Q9UQ35 2752 aaKnown RBP7.96□□□□□ -1.14
ACTN4-204ENST00000440400 PRAC1Q96KF2 57 aa7.96□□□□□ -1.14
ACTN4-204ENST00000440400 ZNF706Q9Y5V0 76 aaPredicted RBP7.96□□□□□ -1.14
ACTN4-204ENST00000440400 Q75L30 129 aa7.95□□□□□ -1.14
ACTN4-204ENST00000440400 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
ACTN4-204ENST00000440400 H0Y9P7 68 aa7.94□□□□□ -1.14
ACTN4-204ENST00000440400 KRTAP10-1P60331 282 aa7.94□□□□□ -1.14
ACTN4-204ENST00000440400 CIRBP-AS1Q8TBR5 109 aa7.93□□□□□ -1.14
ACTN4-204ENST00000440400 CDC42SE1Q9NRR8 79 aa7.93□□□□□ -1.14
ACTN4-204ENST00000440400 IGLV7-43P04211 117 aa7.92□□□□□ -1.14
ACTN4-204ENST00000440400 COA5Q86WW8 74 aa7.92□□□□□ -1.14
ACTN4-204ENST00000440400 A0A0A0MQY5 61 aa7.92□□□□□ -1.14
ACTN4-204ENST00000440400 LINC00313P59037 77 aa7.92□□□□□ -1.14
ACTN4-204ENST00000440400 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.14
ACTN4-204ENST00000440400 SPINK7P58062 85 aa7.9□□□□□ -1.14
ACTN4-204ENST00000440400 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
ACTN4-204ENST00000440400 A0A1B0GVY2 172 aa7.89□□□□□ -1.15
ACTN4-204ENST00000440400 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
ACTN4-204ENST00000440400 PCOTHQ58A44 107 aa7.88□□□□□ -1.15
ACTN4-204ENST00000440400 SPANXA2-OT1Q8N9U9 137 aa7.86□□□□□ -1.15
ACTN4-204ENST00000440400 RYR2Q92736 4967 aa7.86□□□□□ -1.15
ACTN4-204ENST00000440400 A0A087WSZ3 146 aa7.85□□□□□ -1.15
ACTN4-204ENST00000440400 LRP1BQ9NZR2 4599 aa7.85□□□□□ -1.15
ACTN4-204ENST00000440400 LINC00472Q9H8W2 130 aa7.83□□□□□ -1.16
ACTN4-204ENST00000440400 CASC2Q6XLA1 102 aa7.83□□□□□ -1.16
ACTN4-204ENST00000440400 PKHD1L1Q86WI1 4243 aa7.81□□□□□ -1.16
ACTN4-204ENST00000440400 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
ACTN4-204ENST00000440400 Q96NJ1 140 aa7.8□□□□□ -1.16
ACTN4-204ENST00000440400 KRTAP29-1A8MX34 341 aaPredicted RBP7.79□□□□□ -1.16
ACTN4-204ENST00000440400 PKHD1P08F94 4074 aa7.78□□□□□ -1.16
ACTN4-204ENST00000440400 VPS13BQ7Z7G8 4022 aa7.77□□□□□ -1.17
ACTN4-204ENST00000440400 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
ACTN4-204ENST00000440400 IGLV9-49A0A0B4J1Y8 123 aa7.76□□□□□ -1.17
ACTN4-204ENST00000440400 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
ACTN4-204ENST00000440400 IGLV7-46A0A075B6I9 117 aa7.75□□□□□ -1.17
ACTN4-204ENST00000440400 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
ACTN4-204ENST00000440400 KRTAP1-4P0C5Y4 121 aa7.75□□□□□ -1.17
ACTN4-204ENST00000440400 ASB16-AS1Q495Z4 193 aa7.75□□□□□ -1.17
ACTN4-204ENST00000440400 A8MWP4 228 aa7.74□□□□□ -1.17
ACTN4-204ENST00000440400 ANAPC11Q9NYG5 84 aa7.72□□□□□ -1.17
ACTN4-204ENST00000440400 H3BPC8 53 aa7.72□□□□□ -1.17
ACTN4-204ENST00000440400 KMT2CQ8NEZ4 4911 aaKnown RBP7.71□□□□□ -1.18
ACTN4-204ENST00000440400 KRTAP10-4P60372 401 aaPredicted RBP7.71□□□□□ -1.18
ACTN4-204ENST00000440400 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
ACTN4-204ENST00000440400 HRES1P13985 223 aa7.69□□□□□ -1.18
ACTN4-204ENST00000440400 SPINK6Q6UWN8 80 aa7.67□□□□□ -1.18
ACTN4-204ENST00000440400 A0A087X002 238 aa7.67□□□□□ -1.18
ACTN4-204ENST00000440400 RETNLBQ9BQ08 111 aa7.67□□□□□ -1.18
ACTN4-204ENST00000440400 MMP24-AS1A0A0U1RRL7 71 aa7.65□□□□□ -1.19
ACTN4-204ENST00000440400 A0A1B0GVX0 72 aa7.6□□□□□ -1.19
ACTN4-204ENST00000440400 PLA2G1BP04054 148 aaKnown RBP7.59□□□□□ -1.19
ACTN4-204ENST00000440400 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
ACTN4-204ENST00000440400 IGHV6-1A0A0B4J1U7 121 aa7.58□□□□□ -1.2
ACTN4-204ENST00000440400 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
ACTN4-204ENST00000440400 CSAG1Q6PB30 78 aa7.57□□□□□ -1.2
ACTN4-204ENST00000440400 RYR3Q15413 4870 aa7.53□□□□□ -1.2
ACTN4-204ENST00000440400 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
ACTN4-204ENST00000440400 SPINK1P00995 79 aa7.51□□□□□ -1.21
ACTN4-204ENST00000440400 CDK2AP2O75956 126 aa7.51□□□□□ -1.21
ACTN4-204ENST00000440400 HSPG2P98160 4391 aa7.5□□□□□ -1.21
ACTN4-204ENST00000440400 TP53AIP1Q9HCN2 124 aa7.5□□□□□ -1.21
ACTN4-204ENST00000440400 TYMSOSQ8TAI1 123 aa7.49□□□□□ -1.21
ACTN4-204ENST00000440400 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
ACTN4-204ENST00000440400 MRPL34Q9BQ48 92 aaKnown RBP7.47□□□□□ -1.21
ACTN4-204ENST00000440400 SMR3BP02814 79 aaPredicted RBP7.47□□□□□ -1.21
ACTN4-204ENST00000440400 FAT1Q14517 4588 aa7.46□□□□□ -1.22
ACTN4-204ENST00000440400 A0A1B0GU69 56 aa7.46□□□□□ -1.22
ACTN4-204ENST00000440400 KRTAP13-3Q3SY46 172 aa7.45□□□□□ -1.22
ACTN4-204ENST00000440400 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
ACTN4-204ENST00000440400 LINC00304Q8N9R0 145 aa7.43□□□□□ -1.22
ACTN4-204ENST00000440400 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
ACTN4-204ENST00000440400 TNXBP22105 4242 aa7.42□□□□□ -1.22
ACTN4-204ENST00000440400 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
ACTN4-204ENST00000440400 RYR1P21817 5038 aa7.4□□□□□ -1.22
ACTN4-204ENST00000440400 Q5W150 140 aa7.4□□□□□ -1.23
ACTN4-204ENST00000440400 ACYP2P14621 99 aa7.38□□□□□ -1.23
ACTN4-204ENST00000440400 FAM229AH3BQW9 127 aa7.36□□□□□ -1.23
ACTN4-204ENST00000440400 UQCR11O14957 56 aa7.35□□□□□ -1.23
ACTN4-204ENST00000440400 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
ACTN4-204ENST00000440400 KRTAP10-8P60410 259 aa7.35□□□□□ -1.23
ACTN4-204ENST00000440400 ROMO1P60602 79 aa7.33□□□□□ -1.24
ACTN4-204ENST00000440400 Q5VSD8 79 aa7.33□□□□□ -1.24
ACTN4-204ENST00000440400 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
ACTN4-204ENST00000440400 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
ACTN4-204ENST00000440400 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
ACTN4-204ENST00000440400 EPPK1P58107 5090 aaKnown RBP7.26□□□□□ -1.25
ACTN4-204ENST00000440400 Q8N1X5 172 aa7.26□□□□□ -1.25
ACTN4-204ENST00000440400 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
ACTN4-204ENST00000440400 C20orf166-AS1Q96NR2 134 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms