RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
APTR-204ENST00000440088 SERP2Q8N6R1 65 aa11.19□□□□□ -0.62
APTR-204ENST00000440088 MMP24-AS1A0A0U1RRL7 71 aa11.18□□□□□ -0.62
APTR-204ENST00000440088 FLG2Q5D862 2391 aaPredicted RBP11.18□□□□□ -0.62
APTR-204ENST00000440088 KRTAP29-1A8MX34 341 aaPredicted RBP11.17□□□□□ -0.62
APTR-204ENST00000440088 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
APTR-204ENST00000440088 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
APTR-204ENST00000440088 hDV103S1A0JD37 113 aa11.14□□□□□ -0.63
APTR-204ENST00000440088 COX7CP15954 63 aa11.14□□□□□ -0.63
APTR-204ENST00000440088 TNXBP22105 4242 aa11.14□□□□□ -0.63
APTR-204ENST00000440088 OCR1Q9BZK8 76 aa11.13□□□□□ -0.63
APTR-204ENST00000440088 FAT3Q8TDW7 4589 aa11.11□□□□□ -0.63
APTR-204ENST00000440088 UQCRQO14949 82 aa11.11□□□□□ -0.63
APTR-204ENST00000440088 NOTCH2NLQ7Z3S9 236 aa11.11□□□□□ -0.63
APTR-204ENST00000440088 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
APTR-204ENST00000440088 CCDC179H3BU77 68 aa11.08□□□□□ -0.64
APTR-204ENST00000440088 MYCBP2O75592 4640 aa11.07□□□□□ -0.64
APTR-204ENST00000440088 KRTAP4-5Q9BYR2 181 aa11.07□□□□□ -0.64
APTR-204ENST00000440088 LINC00313P59037 77 aa11.06□□□□□ -0.64
APTR-204ENST00000440088 TMEM254Q8TBM7 123 aa11.06□□□□□ -0.64
APTR-204ENST00000440088 MRPL34Q9BQ48 92 aaKnown RBP11.04□□□□□ -0.64
APTR-204ENST00000440088 MT1HL1P0DM35 61 aa11.03□□□□□ -0.64
APTR-204ENST00000440088 OXTP01178 125 aa11.02□□□□□ -0.64
APTR-204ENST00000440088 BIRC6Q9NR09 4857 aa11.02□□□□□ -0.65
APTR-204ENST00000440088 DMBT1Q9UGM3 2413 aaPredicted RBP11□□□□□ -0.65
APTR-204ENST00000440088 RETNLBQ9BQ08 111 aa11□□□□□ -0.65
APTR-204ENST00000440088 NDUFS5O43920 106 aa10.97□□□□□ -0.65
APTR-204ENST00000440088 C20orf197Q8N268 126 aa10.97□□□□□ -0.65
APTR-204ENST00000440088 TP53AIP1Q9HCN2 124 aa10.96□□□□□ -0.65
APTR-204ENST00000440088 C5orf47Q569G3 176 aa10.94□□□□□ -0.66
APTR-204ENST00000440088 KRTAP16-1A8MUX0 517 aa10.92□□□□□ -0.66
APTR-204ENST00000440088 KLKP1Q107X0 134 aa10.9□□□□□ -0.66
APTR-204ENST00000440088 Q8N9P0 234 aaPredicted RBP10.9□□□□□ -0.66
APTR-204ENST00000440088 HERC2O95714 4834 aa10.89□□□□□ -0.67
APTR-204ENST00000440088 SNURFQ9Y675 71 aa10.89□□□□□ -0.67
APTR-204ENST00000440088 MP68P56378 58 aa10.88□□□□□ -0.67
APTR-204ENST00000440088 TRAV22A0A0B4J277 110 aa10.87□□□□□ -0.67
APTR-204ENST00000440088 FP248Q71RG6 208 aaPredicted RBP10.87□□□□□ -0.67
APTR-204ENST00000440088 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
APTR-204ENST00000440088 H0Y9P7 68 aa10.85□□□□□ -0.67
APTR-204ENST00000440088 CYSTM1Q9H1C7 97 aa10.85□□□□□ -0.67
APTR-204ENST00000440088 C9orf92A6NGG3 77 aa10.85□□□□□ -0.67
APTR-204ENST00000440088 ABCA13Q86UQ4 5058 aa10.84□□□□□ -0.67
APTR-204ENST00000440088 H3BPC8 53 aa10.81□□□□□ -0.68
APTR-204ENST00000440088 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
APTR-204ENST00000440088 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
APTR-204ENST00000440088 ZCCHC13Q8WW36 166 aaKnown RBP10.78□□□□□ -0.68
APTR-204ENST00000440088 NDUFC1O43677 76 aa10.77□□□□□ -0.69
APTR-204ENST00000440088 Q5W150 140 aa10.77□□□□□ -0.69
APTR-204ENST00000440088 C1orf64Q8NEQ6 169 aa10.76□□□□□ -0.69
APTR-204ENST00000440088 J3QL48 77 aa10.75□□□□□ -0.69
APTR-204ENST00000440088 H7BZZ5 65 aa10.75□□□□□ -0.69
APTR-204ENST00000440088 KRTAP13-3Q3SY46 172 aa10.74□□□□□ -0.69
APTR-204ENST00000440088 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
APTR-204ENST00000440088 A8MUU9 505 aa10.72□□□□□ -0.69
APTR-204ENST00000440088 PRR4Q16378 134 aa10.72□□□□□ -0.69
APTR-204ENST00000440088 TMEM258P61165 79 aa10.68□□□□□ -0.7
APTR-204ENST00000440088 LOC101927531A0A1B0GV80 90 aa10.66□□□□□ -0.7
APTR-204ENST00000440088 Q75L30 129 aa10.65□□□□□ -0.71
APTR-204ENST00000440088 TPRXLQ17RH7 258 aa10.59□□□□□ -0.71
APTR-204ENST00000440088 XP32Q5T750 250 aa10.59□□□□□ -0.71
APTR-204ENST00000440088 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
APTR-204ENST00000440088 FAM236DA0A1B0GTK5 79 aa10.57□□□□□ -0.72
APTR-204ENST00000440088 IGKV2-30P06310 120 aa10.57□□□□□ -0.72
APTR-204ENST00000440088 FAM236CP0DP71 79 aa10.57□□□□□ -0.72
APTR-204ENST00000440088 PCOTHQ58A44 107 aa10.57□□□□□ -0.72
APTR-204ENST00000440088 RPL37P61927 97 aaKnown RBP10.53□□□□□ -0.72
APTR-204ENST00000440088 IGKV2D-30A0A075B6S6 120 aa10.53□□□□□ -0.72
APTR-204ENST00000440088 ATP5EP56381 51 aaPredicted RBP10.53□□□□□ -0.72
APTR-204ENST00000440088 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
APTR-204ENST00000440088 SPANXA2-OT1Q8N9U9 137 aa10.5□□□□□ -0.73
APTR-204ENST00000440088 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
APTR-204ENST00000440088 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
APTR-204ENST00000440088 HRES1P13985 223 aa10.41□□□□□ -0.74
APTR-204ENST00000440088 LPAP08519 4548 aa10.4□□□□□ -0.74
APTR-204ENST00000440088 SPINK7P58062 85 aa10.38□□□□□ -0.75
APTR-204ENST00000440088 LRP2P98164 4655 aa10.35□□□□□ -0.75
APTR-204ENST00000440088 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
APTR-204ENST00000440088 RPS28P62857 69 aaKnown RBP10.33□□□□□ -0.76
APTR-204ENST00000440088 HERC1Q15751 4861 aa10.26□□□□□ -0.77
APTR-204ENST00000440088 DMAC1Q96GE9 116 aa10.26□□□□□ -0.77
APTR-204ENST00000440088 C4orf26Q17RF5 130 aa10.25□□□□□ -0.77
APTR-204ENST00000440088 SEC61BP60468 96 aaKnown RBP10.23□□□□□ -0.77
APTR-204ENST00000440088 ACYP2P14621 99 aa10.21□□□□□ -0.77
APTR-204ENST00000440088 COA5Q86WW8 74 aa10.19□□□□□ -0.78
APTR-204ENST00000440088 A8MUN3 132 aa10.16□□□□□ -0.78
APTR-204ENST00000440088 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
APTR-204ENST00000440088 COX6B2Q6YFQ2 88 aa10.12□□□□□ -0.79
APTR-204ENST00000440088 KRTAP3-1Q9BYR8 98 aa10.09□□□□□ -0.79
APTR-204ENST00000440088 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
APTR-204ENST00000440088 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
APTR-204ENST00000440088 MPLKIPQ8TAP9 179 aa10□□□□□ -0.81
APTR-204ENST00000440088 MUC17Q685J3 4493 aa10□□□□□ -0.81
APTR-204ENST00000440088 RBM12B-AS1Q9P1G2 102 aa9.98□□□□□ -0.81
APTR-204ENST00000440088 KRTAP4-1Q9BYQ7 146 aa9.97□□□□□ -0.81
APTR-204ENST00000440088 Q1T7F1 81 aa9.88□□□□□ -0.83
APTR-204ENST00000440088 H1FX-AS1Q4G0G2 97 aa9.87□□□□□ -0.83
APTR-204ENST00000440088 V9GYY9 64 aa9.86□□□□□ -0.83
APTR-204ENST00000440088 SPTSSBQ8NFR3 76 aa9.85□□□□□ -0.83
APTR-204ENST00000440088 S4R3F8 94 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms