RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 H3BPC8 53 aa6.78□□□□□ -1.32
SMAD3-202ENST00000439724 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
SMAD3-202ENST00000439724 TP53AIP1Q9HCN2 124 aa6.78□□□□□ -1.32
SMAD3-202ENST00000439724 C8orf87E5RJ46 101 aa6.77□□□□□ -1.33
SMAD3-202ENST00000439724 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
SMAD3-202ENST00000439724 MRPL34Q9BQ48 92 aaKnown RBP6.77□□□□□ -1.33
SMAD3-202ENST00000439724 H0Y9P7 68 aa6.76□□□□□ -1.33
SMAD3-202ENST00000439724 NOTCH2NLQ7Z3S9 236 aa6.76□□□□□ -1.33
SMAD3-202ENST00000439724 SPINK1P00995 79 aa6.76□□□□□ -1.33
SMAD3-202ENST00000439724 C4orf48Q5BLP8 95 aa6.76□□□□□ -1.33
SMAD3-202ENST00000439724 PKHD1P08F94 4074 aa6.75□□□□□ -1.33
SMAD3-202ENST00000439724 VPS13BQ7Z7G8 4022 aa6.75□□□□□ -1.33
SMAD3-202ENST00000439724 TRAV22A0A0B4J277 110 aa6.75□□□□□ -1.33
SMAD3-202ENST00000439724 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
SMAD3-202ENST00000439724 RYR2Q92736 4967 aa6.75□□□□□ -1.33
SMAD3-202ENST00000439724 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
SMAD3-202ENST00000439724 LINC00208Q96KT6 92 aa6.73□□□□□ -1.33
SMAD3-202ENST00000439724 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
SMAD3-202ENST00000439724 SPAG11AQ6PDA7 123 aa6.72□□□□□ -1.33
SMAD3-202ENST00000439724 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
SMAD3-202ENST00000439724 SERP1Q9Y6X1 66 aa6.71□□□□□ -1.33
SMAD3-202ENST00000439724 NDUFS5O43920 106 aa6.71□□□□□ -1.34
SMAD3-202ENST00000439724 LINC00313P59037 77 aa6.7□□□□□ -1.34
SMAD3-202ENST00000439724 C1orf64Q8NEQ6 169 aa6.69□□□□□ -1.34
SMAD3-202ENST00000439724 OXTP01178 125 aa6.68□□□□□ -1.34
SMAD3-202ENST00000439724 APOBP04114 4563 aaKnown RBP6.66□□□□□ -1.34
SMAD3-202ENST00000439724 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
SMAD3-202ENST00000439724 Q8N9P0 234 aaPredicted RBP6.66□□□□□ -1.34
SMAD3-202ENST00000439724 KRTAP16-1A8MUX0 517 aa6.65□□□□□ -1.35
SMAD3-202ENST00000439724 KRTAP13-3Q3SY46 172 aa6.64□□□□□ -1.35
SMAD3-202ENST00000439724 SPANXA2-OT1Q8N9U9 137 aa6.64□□□□□ -1.35
SMAD3-202ENST00000439724 CYP4F30PQ9H0H9 118 aa6.64□□□□□ -1.35
SMAD3-202ENST00000439724 KMT2CQ8NEZ4 4911 aaKnown RBP6.61□□□□□ -1.35
SMAD3-202ENST00000439724 Q5VSD8 79 aa6.6□□□□□ -1.35
SMAD3-202ENST00000439724 Q5W150 140 aa6.6□□□□□ -1.35
SMAD3-202ENST00000439724 LOC101927531A0A1B0GV80 90 aa6.6□□□□□ -1.35
SMAD3-202ENST00000439724 PKHD1L1Q86WI1 4243 aa6.59□□□□□ -1.36
SMAD3-202ENST00000439724 SMIM26A0A096LP01 95 aa6.56□□□□□ -1.36
SMAD3-202ENST00000439724 PRR4Q16378 134 aa6.56□□□□□ -1.36
SMAD3-202ENST00000439724 IGLV7-46A0A075B6I9 117 aa6.55□□□□□ -1.36
SMAD3-202ENST00000439724 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
SMAD3-202ENST00000439724 KRTAP10-8P60410 259 aa6.53□□□□□ -1.36
SMAD3-202ENST00000439724 FAT1Q14517 4588 aa6.53□□□□□ -1.36
SMAD3-202ENST00000439724 IGKV2-30P06310 120 aa6.5□□□□□ -1.37
SMAD3-202ENST00000439724 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
SMAD3-202ENST00000439724 Q8N1X5 172 aa6.5□□□□□ -1.37
SMAD3-202ENST00000439724 KRTAP17-1Q9BYP8 105 aa6.5□□□□□ -1.37
SMAD3-202ENST00000439724 RETNLBQ9BQ08 111 aa6.49□□□□□ -1.37
SMAD3-202ENST00000439724 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
SMAD3-202ENST00000439724 HSPG2P98160 4391 aa6.47□□□□□ -1.37
SMAD3-202ENST00000439724 C20orf166-AS1Q96NR2 134 aa6.46□□□□□ -1.37
SMAD3-202ENST00000439724 A8MUU9 505 aa6.45□□□□□ -1.38
SMAD3-202ENST00000439724 C9orf92A6NGG3 77 aa6.44□□□□□ -1.38
SMAD3-202ENST00000439724 RYR3Q15413 4870 aa6.43□□□□□ -1.38
SMAD3-202ENST00000439724 HRES1P13985 223 aa6.43□□□□□ -1.38
SMAD3-202ENST00000439724 COA5Q86WW8 74 aa6.43□□□□□ -1.38
SMAD3-202ENST00000439724 C4orf26Q17RF5 130 aa6.42□□□□□ -1.38
SMAD3-202ENST00000439724 IGKV2D-30A0A075B6S6 120 aa6.4□□□□□ -1.38
SMAD3-202ENST00000439724 RYR1P21817 5038 aa6.4□□□□□ -1.39
SMAD3-202ENST00000439724 MT1HL1P0DM35 61 aa6.4□□□□□ -1.39
SMAD3-202ENST00000439724 Q1T7F1 81 aa6.39□□□□□ -1.39
SMAD3-202ENST00000439724 C7orf65Q6ZTY9 151 aa6.39□□□□□ -1.39
SMAD3-202ENST00000439724 MPLKIPQ8TAP9 179 aa6.39□□□□□ -1.39
SMAD3-202ENST00000439724 DMAC1Q96GE9 116 aa6.39□□□□□ -1.39
SMAD3-202ENST00000439724 Q75L30 129 aa6.37□□□□□ -1.39
SMAD3-202ENST00000439724 ACYP2P14621 99 aa6.36□□□□□ -1.39
SMAD3-202ENST00000439724 TNXBP22105 4242 aa6.36□□□□□ -1.39
SMAD3-202ENST00000439724 V9GYY9 64 aa6.35□□□□□ -1.39
SMAD3-202ENST00000439724 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
SMAD3-202ENST00000439724 KIAA1109Q2LD37 5005 aa6.29□□□□□ -1.4
SMAD3-202ENST00000439724 DMBT1Q9UGM3 2413 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-202ENST00000439724 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.4
SMAD3-202ENST00000439724 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
SMAD3-202ENST00000439724 A8MUN3 132 aa6.26□□□□□ -1.41
SMAD3-202ENST00000439724 CHKB-CPT1BH3BT56 60 aa6.25□□□□□ -1.41
SMAD3-202ENST00000439724 SPINK7P58062 85 aa6.25□□□□□ -1.41
SMAD3-202ENST00000439724 XP32Q5T750 250 aa6.25□□□□□ -1.41
SMAD3-202ENST00000439724 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
SMAD3-202ENST00000439724 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
SMAD3-202ENST00000439724 PSPHP1O15172 72 aa6.24□□□□□ -1.41
SMAD3-202ENST00000439724 ATP11AUNQ6ZP68 121 aa6.24□□□□□ -1.41
SMAD3-202ENST00000439724 Q5VV11 94 aa6.21□□□□□ -1.42
SMAD3-202ENST00000439724 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
SMAD3-202ENST00000439724 EPPK1P58107 5090 aaKnown RBP6.21□□□□□ -1.42
SMAD3-202ENST00000439724 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
SMAD3-202ENST00000439724 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.42
SMAD3-202ENST00000439724 COX6B2Q6YFQ2 88 aa6.15□□□□□ -1.43
SMAD3-202ENST00000439724 BRK1Q8WUW1 75 aa6.14□□□□□ -1.43
SMAD3-202ENST00000439724 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
SMAD3-202ENST00000439724 MYCBP2O75592 4640 aa6.12□□□□□ -1.43
SMAD3-202ENST00000439724 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
SMAD3-202ENST00000439724 J3QL48 77 aa6.08□□□□□ -1.44
SMAD3-202ENST00000439724 SVIPQ8NHG7 77 aa6.08□□□□□ -1.44
SMAD3-202ENST00000439724 A0A1B0GU69 56 aa6.07□□□□□ -1.44
SMAD3-202ENST00000439724 A6NED7 52 aa6.05□□□□□ -1.44
SMAD3-202ENST00000439724 BIRC6Q9NR09 4857 aa6□□□□□ -1.45
SMAD3-202ENST00000439724 LCA10Q71F78 164 aa5.99□□□□□ -1.45
SMAD3-202ENST00000439724 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
SMAD3-202ENST00000439724 A8MU10 97 aa5.97□□□□□ -1.45
SMAD3-202ENST00000439724 SEC61GP60059 68 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms