RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 RAB37Q96AX2 223 aa4.04□□□□□ -1.76
RTN4-211ENST00000438462 URB1-AS1Q96HZ7 61 aa4.04□□□□□ -1.76
RTN4-211ENST00000438462 LITAFQ99732 161 aa4.04□□□□□ -1.76
RTN4-211ENST00000438462 C4orf26Q17RF5 130 aa4.03□□□□□ -1.76
RTN4-211ENST00000438462 hADV29S1A0JD25 119 aa4.02□□□□□ -1.77
RTN4-211ENST00000438462 A6NDN8 102 aa4.02□□□□□ -1.77
RTN4-211ENST00000438462 SERF1AO75920 110 aa4.02□□□□□ -1.77
RTN4-211ENST00000438462 MT1MQ8N339 61 aa4.02□□□□□ -1.77
RTN4-211ENST00000438462 PPDPFLQ8WWR9 84 aa4.01□□□□□ -1.77
RTN4-211ENST00000438462 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
RTN4-211ENST00000438462 SMIM11BQ8TCY0 68 aa4□□□□□ -1.77
RTN4-211ENST00000438462 KRTAP4-3Q9BYR4 195 aa4□□□□□ -1.77
RTN4-211ENST00000438462 IGKV2D-30A0A075B6S6 120 aa3.99□□□□□ -1.77
RTN4-211ENST00000438462 IGKV2-30P06310 120 aa3.99□□□□□ -1.77
RTN4-211ENST00000438462 LINC00614P0C842 121 aa3.98□□□□□ -1.77
RTN4-211ENST00000438462 IFI27L1Q96BM0 104 aa3.98□□□□□ -1.77
RTN4-211ENST00000438462 HERVK_113P61574 105 aa3.97□□□□□ -1.77
RTN4-211ENST00000438462 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.96□□□□□ -1.78
RTN4-211ENST00000438462 H0Y8G0 127 aa3.94□□□□□ -1.78
RTN4-211ENST00000438462 C7orf65Q6ZTY9 151 aa3.94□□□□□ -1.78
RTN4-211ENST00000438462 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
RTN4-211ENST00000438462 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
RTN4-211ENST00000438462 TIMM17BO60830 172 aa3.92□□□□□ -1.78
RTN4-211ENST00000438462 KRTAP12-4P60329 112 aa3.92□□□□□ -1.78
RTN4-211ENST00000438462 VAMP3Q15836 100 aa3.92□□□□□ -1.78
RTN4-211ENST00000438462 K7EQZ3 153 aa3.91□□□□□ -1.78
RTN4-211ENST00000438462 C18orf32Q8TCD1 76 aa3.91□□□□□ -1.78
RTN4-211ENST00000438462 MT-ND4LP03901 98 aa3.9□□□□□ -1.79
RTN4-211ENST00000438462 TCTE3Q8IZS6 198 aa3.9□□□□□ -1.79
RTN4-211ENST00000438462 TRAPPC1Q9Y5R8 145 aa3.9□□□□□ -1.79
RTN4-211ENST00000438462 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
RTN4-211ENST00000438462 PLNP26678 52 aa3.88□□□□□ -1.79
RTN4-211ENST00000438462 FABP9Q0Z7S8 132 aa3.88□□□□□ -1.79
RTN4-211ENST00000438462 C2orf91Q6ZV80 131 aa3.88□□□□□ -1.79
RTN4-211ENST00000438462 SVIPQ8NHG7 77 aa3.88□□□□□ -1.79
RTN4-211ENST00000438462 SEC11CQ9BY50 192 aa3.88□□□□□ -1.79
RTN4-211ENST00000438462 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
RTN4-211ENST00000438462 PEA15Q15121 130 aa3.87□□□□□ -1.79
RTN4-211ENST00000438462 H3BMG7 143 aa3.86□□□□□ -1.79
RTN4-211ENST00000438462 Q5W150 140 aa3.86□□□□□ -1.79
RTN4-211ENST00000438462 TRBV7-4A0A0J9YYF1 115 aa3.85□□□□□ -1.79
RTN4-211ENST00000438462 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
RTN4-211ENST00000438462 HSPB8Q9UJY1 196 aa3.84□□□□□ -1.79
RTN4-211ENST00000438462 PMCHL2Q9BQD1 86 aa3.83□□□□□ -1.8
RTN4-211ENST00000438462 E9PLD3 99 aa3.82□□□□□ -1.8
RTN4-211ENST00000438462 DPM2O94777 84 aa3.82□□□□□ -1.8
RTN4-211ENST00000438462 C12orf57Q99622 126 aa3.82□□□□□ -1.8
RTN4-211ENST00000438462 Q6ZVQ6 151 aa3.81□□□□□ -1.8
RTN4-211ENST00000438462 IGKCP01834 107 aa3.8□□□□□ -1.8
RTN4-211ENST00000438462 TRGC2P03986 189 aa3.78□□□□□ -1.8
RTN4-211ENST00000438462 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
RTN4-211ENST00000438462 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
RTN4-211ENST00000438462 TRACP01848 142 aa3.76□□□□□ -1.81
RTN4-211ENST00000438462 COPS9Q8WXC6 57 aa3.76□□□□□ -1.81
RTN4-211ENST00000438462 NDUFB1O75438 58 aa3.75□□□□□ -1.81
RTN4-211ENST00000438462 MT1LQ93083 61 aa3.75□□□□□ -1.81
RTN4-211ENST00000438462 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
RTN4-211ENST00000438462 J3KT08 172 aa3.74□□□□□ -1.81
RTN4-211ENST00000438462 COX19Q49B96 90 aa3.74□□□□□ -1.81
RTN4-211ENST00000438462 ADM2Q7Z4H4 148 aa3.74□□□□□ -1.81
RTN4-211ENST00000438462 ANKRD29Q8N6D5 301 aa3.74□□□□□ -1.81
RTN4-211ENST00000438462 A0A1B0GV72 72 aa3.73□□□□□ -1.81
RTN4-211ENST00000438462 IFITM1P13164 125 aa3.73□□□□□ -1.81
RTN4-211ENST00000438462 MUSTN1Q8IVN3 82 aa3.73□□□□□ -1.81
RTN4-211ENST00000438462 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
RTN4-211ENST00000438462 NDUFS5O43920 106 aa3.72□□□□□ -1.81
RTN4-211ENST00000438462 KRTAP19-5Q3LI72 72 aa3.72□□□□□ -1.81
RTN4-211ENST00000438462 R4GN34 69 aa3.72□□□□□ -1.81
RTN4-211ENST00000438462 CCKP06307 115 aa3.71□□□□□ -1.82
RTN4-211ENST00000438462 PCP4P48539 62 aa3.71□□□□□ -1.82
RTN4-211ENST00000438462 CHCHD1Q96BP2 118 aaKnown RBP3.71□□□□□ -1.82
RTN4-211ENST00000438462 MRPL34Q9BQ48 92 aaKnown RBP3.71□□□□□ -1.82
RTN4-211ENST00000438462 RGS21Q2M5E4 152 aa3.69□□□□□ -1.82
RTN4-211ENST00000438462 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
RTN4-211ENST00000438462 FABP2P12104 132 aa3.68□□□□□ -1.82
RTN4-211ENST00000438462 S100PP25815 95 aa3.68□□□□□ -1.82
RTN4-211ENST00000438462 BVES-AS1Q5T3Y7 98 aa3.68□□□□□ -1.82
RTN4-211ENST00000438462 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
RTN4-211ENST00000438462 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
RTN4-211ENST00000438462 SCGB1D4Q6XE38 83 aa3.67□□□□□ -1.82
RTN4-211ENST00000438462 TMEM254Q8TBM7 123 aa3.67□□□□□ -1.82
RTN4-211ENST00000438462 A0A087WVE0 104 aa3.66□□□□□ -1.82
RTN4-211ENST00000438462 M0QZ58 72 aa3.66□□□□□ -1.82
RTN4-211ENST00000438462 LEPROTL1O95214 131 aa3.65□□□□□ -1.83
RTN4-211ENST00000438462 HSBP1O75506 76 aa3.64□□□□□ -1.83
RTN4-211ENST00000438462 MMP24-AS1A0A0U1RRL7 71 aa3.62□□□□□ -1.83
RTN4-211ENST00000438462 UQCC3Q6UW78 93 aa3.61□□□□□ -1.83
RTN4-211ENST00000438462 VPS25Q9BRG1 176 aa3.61□□□□□ -1.83
RTN4-211ENST00000438462 SNCGO76070 127 aa3.57□□□□□ -1.84
RTN4-211ENST00000438462 FABP4P15090 132 aa3.56□□□□□ -1.84
RTN4-211ENST00000438462 Q6ZQT0 140 aa3.55□□□□□ -1.84
RTN4-211ENST00000438462 HCG22E2RYF7 251 aa3.54□□□□□ -1.84
RTN4-211ENST00000438462 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
RTN4-211ENST00000438462 KRTAP5-1Q6L8H4 278 aa3.54□□□□□ -1.84
RTN4-211ENST00000438462 P0C880 135 aa3.51□□□□□ -1.85
RTN4-211ENST00000438462 NDUFC1O43677 76 aa3.49□□□□□ -1.85
RTN4-211ENST00000438462 A0A1W2PPM0 123 aa3.45□□□□□ -1.86
RTN4-211ENST00000438462 H0YGX0 51 aa3.45□□□□□ -1.86
RTN4-211ENST00000438462 PAM16Q9Y3D7 125 aa3.45□□□□□ -1.86
RTN4-211ENST00000438462 A0A0A0MQY5 61 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms