RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 RPS29P62273 56 aaKnown RBP8.94□□□□□ -0.98
SGCE-205ENST00000437425 KRTAP29-1A8MX34 341 aaPredicted RBP8.93□□□□□ -0.98
SGCE-205ENST00000437425 WFDC13Q8IUB5 93 aa8.9□□□□□ -0.98
SGCE-205ENST00000437425 MMP24-AS1A0A0U1RRL7 71 aa8.9□□□□□ -0.99
SGCE-205ENST00000437425 hDV103S1A0JD37 113 aa8.9□□□□□ -0.99
SGCE-205ENST00000437425 KLKP1Q107X0 134 aa8.9□□□□□ -0.99
SGCE-205ENST00000437425 C20orf197Q8N268 126 aa8.89□□□□□ -0.99
SGCE-205ENST00000437425 C8orf17Q9NRJ1 99 aa8.89□□□□□ -0.99
SGCE-205ENST00000437425 C8orf87E5RJ46 101 aa8.88□□□□□ -0.99
SGCE-205ENST00000437425 C5orf47Q569G3 176 aa8.88□□□□□ -0.99
SGCE-205ENST00000437425 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
SGCE-205ENST00000437425 NDUFC1O43677 76 aa8.87□□□□□ -0.99
SGCE-205ENST00000437425 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
SGCE-205ENST00000437425 PRR26Q8N8Z3 221 aa8.86□□□□□ -0.99
SGCE-205ENST00000437425 TMEM254Q8TBM7 123 aa8.85□□□□□ -0.99
SGCE-205ENST00000437425 C1orf195Q5TG92 126 aa8.85□□□□□ -0.99
SGCE-205ENST00000437425 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
SGCE-205ENST00000437425 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
SGCE-205ENST00000437425 TMEM258P61165 79 aa8.81□□□□□ -1
SGCE-205ENST00000437425 H3BPC8 53 aa8.8□□□□□ -1
SGCE-205ENST00000437425 MP68P56378 58 aa8.8□□□□□ -1
SGCE-205ENST00000437425 Q5VSD8 79 aa8.8□□□□□ -1
SGCE-205ENST00000437425 MRPL34Q9BQ48 92 aaKnown RBP8.8□□□□□ -1
SGCE-205ENST00000437425 A0A0U1RQV1 116 aa8.8□□□□□ -1
SGCE-205ENST00000437425 FAT1Q14517 4588 aa8.78□□□□□ -1
SGCE-205ENST00000437425 LINC00313P59037 77 aa8.77□□□□□ -1.01
SGCE-205ENST00000437425 SNURFQ9Y675 71 aa8.76□□□□□ -1.01
SGCE-205ENST00000437425 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
SGCE-205ENST00000437425 PKHD1L1Q86WI1 4243 aa8.75□□□□□ -1.01
SGCE-205ENST00000437425 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
SGCE-205ENST00000437425 H7BZZ5 65 aa8.74□□□□□ -1.01
SGCE-205ENST00000437425 TRAV22A0A0B4J277 110 aa8.73□□□□□ -1.01
SGCE-205ENST00000437425 H0Y9P7 68 aa8.72□□□□□ -1.01
SGCE-205ENST00000437425 NDUFS5O43920 106 aa8.71□□□□□ -1.01
SGCE-205ENST00000437425 ATP5EP56381 51 aaPredicted RBP8.71□□□□□ -1.01
SGCE-205ENST00000437425 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
SGCE-205ENST00000437425 Q8N1X5 172 aa8.7□□□□□ -1.02
SGCE-205ENST00000437425 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
SGCE-205ENST00000437425 HSPG2P98160 4391 aa8.69□□□□□ -1.02
SGCE-205ENST00000437425 Q8N9P0 234 aaPredicted RBP8.67□□□□□ -1.02
SGCE-205ENST00000437425 FAM236DA0A1B0GTK5 79 aa8.66□□□□□ -1.02
SGCE-205ENST00000437425 FAM236CP0DP71 79 aa8.66□□□□□ -1.02
SGCE-205ENST00000437425 KRTAP10-8P60410 259 aa8.66□□□□□ -1.02
SGCE-205ENST00000437425 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
SGCE-205ENST00000437425 C1orf64Q8NEQ6 169 aa8.64□□□□□ -1.03
SGCE-205ENST00000437425 KRTAP16-1A8MUX0 517 aa8.61□□□□□ -1.03
SGCE-205ENST00000437425 RPS28P62857 69 aaKnown RBP8.61□□□□□ -1.03
SGCE-205ENST00000437425 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
SGCE-205ENST00000437425 HERC1Q15751 4861 aa8.58□□□□□ -1.04
SGCE-205ENST00000437425 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
SGCE-205ENST00000437425 KRTAP13-3Q3SY46 172 aa8.54□□□□□ -1.04
SGCE-205ENST00000437425 FP248Q71RG6 208 aaPredicted RBP8.54□□□□□ -1.04
SGCE-205ENST00000437425 OXTP01178 125 aa8.54□□□□□ -1.04
SGCE-205ENST00000437425 SERP1Q9Y6X1 66 aa8.54□□□□□ -1.04
SGCE-205ENST00000437425 Q5W150 140 aa8.51□□□□□ -1.05
SGCE-205ENST00000437425 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
SGCE-205ENST00000437425 TNXBP22105 4242 aa8.49□□□□□ -1.05
SGCE-205ENST00000437425 FLG2Q5D862 2391 aaPredicted RBP8.47□□□□□ -1.05
SGCE-205ENST00000437425 C20orf166-AS1Q96NR2 134 aa8.47□□□□□ -1.05
SGCE-205ENST00000437425 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.05
SGCE-205ENST00000437425 FAT3Q8TDW7 4589 aa8.46□□□□□ -1.06
SGCE-205ENST00000437425 IGLV7-46A0A075B6I9 117 aa8.45□□□□□ -1.06
SGCE-205ENST00000437425 A8MUU9 505 aa8.45□□□□□ -1.06
SGCE-205ENST00000437425 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
SGCE-205ENST00000437425 IGKV2-30P06310 120 aa8.43□□□□□ -1.06
SGCE-205ENST00000437425 LRP1Q07954 4544 aaKnown RBP8.42□□□□□ -1.06
SGCE-205ENST00000437425 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
SGCE-205ENST00000437425 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
SGCE-205ENST00000437425 Q75L30 129 aa8.39□□□□□ -1.07
SGCE-205ENST00000437425 C7orf65Q6ZTY9 151 aa8.35□□□□□ -1.07
SGCE-205ENST00000437425 DMBT1Q9UGM3 2413 aaPredicted RBP8.35□□□□□ -1.07
SGCE-205ENST00000437425 SMIM26A0A096LP01 95 aa8.34□□□□□ -1.08
SGCE-205ENST00000437425 PRR4Q16378 134 aa8.34□□□□□ -1.08
SGCE-205ENST00000437425 IGKV2D-30A0A075B6S6 120 aa8.32□□□□□ -1.08
SGCE-205ENST00000437425 MYCBP2O75592 4640 aa8.32□□□□□ -1.08
SGCE-205ENST00000437425 HRES1P13985 223 aa8.3□□□□□ -1.08
SGCE-205ENST00000437425 ATP11AUNQ6ZP68 121 aa8.27□□□□□ -1.09
SGCE-205ENST00000437425 ACYP2P14621 99 aa8.26□□□□□ -1.09
SGCE-205ENST00000437425 RPL37P61927 97 aaKnown RBP8.25□□□□□ -1.09
SGCE-205ENST00000437425 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
SGCE-205ENST00000437425 DMAC1Q96GE9 116 aa8.24□□□□□ -1.09
SGCE-205ENST00000437425 COA5Q86WW8 74 aa8.24□□□□□ -1.09
SGCE-205ENST00000437425 XP32Q5T750 250 aa8.23□□□□□ -1.09
SGCE-205ENST00000437425 J3QL48 77 aa8.21□□□□□ -1.1
SGCE-205ENST00000437425 UBR4Q5T4S7 5183 aa8.21□□□□□ -1.1
SGCE-205ENST00000437425 A8MUN3 132 aa8.2□□□□□ -1.1
SGCE-205ENST00000437425 SPINK7P58062 85 aa8.19□□□□□ -1.1
SGCE-205ENST00000437425 V9GYY9 64 aa8.19□□□□□ -1.1
SGCE-205ENST00000437425 Q1T7F1 81 aa8.13□□□□□ -1.11
SGCE-205ENST00000437425 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
SGCE-205ENST00000437425 HMCN2Q8NDA2 5059 aa8.08□□□□□ -1.12
SGCE-205ENST00000437425 MPLKIPQ8TAP9 179 aa8.08□□□□□ -1.12
SGCE-205ENST00000437425 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
SGCE-205ENST00000437425 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
SGCE-205ENST00000437425 SPTSSBQ8NFR3 76 aa8□□□□□ -1.13
SGCE-205ENST00000437425 SEC61BP60468 96 aaKnown RBP7.98□□□□□ -1.13
SGCE-205ENST00000437425 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
SGCE-205ENST00000437425 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
SGCE-205ENST00000437425 LCE2BO14633 110 aa7.93□□□□□ -1.14
SGCE-205ENST00000437425 SVIPQ8NHG7 77 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms