RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 A0A1B0GVX0 72 aa7.57□□□□□ -1.2
DDX56-204ENST00000431640 TP53AIP1Q9HCN2 124 aa7.57□□□□□ -1.2
DDX56-204ENST00000431640 C8orf17Q9NRJ1 99 aa7.56□□□□□ -1.2
DDX56-204ENST00000431640 ASB16-AS1Q495Z4 193 aa7.55□□□□□ -1.2
DDX56-204ENST00000431640 VPS13BQ7Z7G8 4022 aa7.54□□□□□ -1.2
DDX56-204ENST00000431640 H0Y9P7 68 aa7.53□□□□□ -1.2
DDX56-204ENST00000431640 SMR3BP02814 79 aaPredicted RBP7.53□□□□□ -1.2
DDX56-204ENST00000431640 BIRC6Q9NR09 4857 aa7.52□□□□□ -1.2
DDX56-204ENST00000431640 FAT1Q14517 4588 aa7.52□□□□□ -1.2
DDX56-204ENST00000431640 IGHV6-1A0A0B4J1U7 121 aa7.52□□□□□ -1.21
DDX56-204ENST00000431640 OXTP01178 125 aa7.51□□□□□ -1.21
DDX56-204ENST00000431640 KRTAP10-4P60372 401 aaPredicted RBP7.51□□□□□ -1.21
DDX56-204ENST00000431640 LINC00208Q96KT6 92 aa7.51□□□□□ -1.21
DDX56-204ENST00000431640 Q5XG85 94 aa7.5□□□□□ -1.21
DDX56-204ENST00000431640 TRAV22A0A0B4J277 110 aa7.5□□□□□ -1.21
DDX56-204ENST00000431640 MRPL34Q9BQ48 92 aaKnown RBP7.49□□□□□ -1.21
DDX56-204ENST00000431640 SMIM26A0A096LP01 95 aa7.48□□□□□ -1.21
DDX56-204ENST00000431640 A0A087X002 238 aa7.47□□□□□ -1.21
DDX56-204ENST00000431640 C8orf87E5RJ46 101 aa7.47□□□□□ -1.21
DDX56-204ENST00000431640 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
DDX56-204ENST00000431640 C1orf64Q8NEQ6 169 aa7.47□□□□□ -1.21
DDX56-204ENST00000431640 SPINK6Q6UWN8 80 aa7.46□□□□□ -1.21
DDX56-204ENST00000431640 NDUFS5O43920 106 aa7.45□□□□□ -1.22
DDX56-204ENST00000431640 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
DDX56-204ENST00000431640 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
DDX56-204ENST00000431640 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
DDX56-204ENST00000431640 CYP4F30PQ9H0H9 118 aa7.45□□□□□ -1.22
DDX56-204ENST00000431640 PLA2G1BP04054 148 aaKnown RBP7.43□□□□□ -1.22
DDX56-204ENST00000431640 C4orf48Q5BLP8 95 aa7.43□□□□□ -1.22
DDX56-204ENST00000431640 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 HERC2O95714 4834 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 C1orf195Q5TG92 126 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 Q5VSD8 79 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 NOTCH2NLQ7Z3S9 236 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
DDX56-204ENST00000431640 SPINK1P00995 79 aa7.39□□□□□ -1.23
DDX56-204ENST00000431640 LINC00313P59037 77 aa7.39□□□□□ -1.23
DDX56-204ENST00000431640 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
DDX56-204ENST00000431640 Q8N1X5 172 aa7.37□□□□□ -1.23
DDX56-204ENST00000431640 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
DDX56-204ENST00000431640 FP248Q71RG6 208 aaPredicted RBP7.35□□□□□ -1.23
DDX56-204ENST00000431640 IGLV7-46A0A075B6I9 117 aa7.34□□□□□ -1.23
DDX56-204ENST00000431640 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
DDX56-204ENST00000431640 RPS29P62273 56 aaKnown RBP7.34□□□□□ -1.23
DDX56-204ENST00000431640 C4orf26Q17RF5 130 aa7.34□□□□□ -1.23
DDX56-204ENST00000431640 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
DDX56-204ENST00000431640 PRR4Q16378 134 aa7.33□□□□□ -1.24
DDX56-204ENST00000431640 Q8N9P0 234 aaPredicted RBP7.31□□□□□ -1.24
DDX56-204ENST00000431640 ABCA13Q86UQ4 5058 aa7.31□□□□□ -1.24
DDX56-204ENST00000431640 LINC00304Q8N9R0 145 aa7.3□□□□□ -1.24
DDX56-204ENST00000431640 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
DDX56-204ENST00000431640 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
DDX56-204ENST00000431640 PRR26Q8N8Z3 221 aa7.28□□□□□ -1.24
DDX56-204ENST00000431640 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
DDX56-204ENST00000431640 LRP1Q07954 4544 aaKnown RBP7.27□□□□□ -1.24
DDX56-204ENST00000431640 Q5W150 140 aa7.27□□□□□ -1.25
DDX56-204ENST00000431640 Q1T7F1 81 aa7.25□□□□□ -1.25
DDX56-204ENST00000431640 MPLKIPQ8TAP9 179 aa7.25□□□□□ -1.25
DDX56-204ENST00000431640 KRTAP16-1A8MUX0 517 aa7.25□□□□□ -1.25
DDX56-204ENST00000431640 V9GYY9 64 aa7.25□□□□□ -1.25
DDX56-204ENST00000431640 FAT3Q8TDW7 4589 aa7.24□□□□□ -1.25
DDX56-204ENST00000431640 SVIPQ8NHG7 77 aa7.23□□□□□ -1.25
DDX56-204ENST00000431640 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
DDX56-204ENST00000431640 COA5Q86WW8 74 aa7.2□□□□□ -1.26
DDX56-204ENST00000431640 TNXBP22105 4242 aa7.18□□□□□ -1.26
DDX56-204ENST00000431640 IGKV2-30P06310 120 aa7.17□□□□□ -1.26
DDX56-204ENST00000431640 PCLOQ9Y6V0 5065 aa7.16□□□□□ -1.26
DDX56-204ENST00000431640 MT1HL1P0DM35 61 aa7.15□□□□□ -1.27
DDX56-204ENST00000431640 ACYP2P14621 99 aa7.14□□□□□ -1.27
DDX56-204ENST00000431640 RETNLBQ9BQ08 111 aa7.13□□□□□ -1.27
DDX56-204ENST00000431640 HRES1P13985 223 aa7.12□□□□□ -1.27
DDX56-204ENST00000431640 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
DDX56-204ENST00000431640 DMAC1Q96GE9 116 aa7.08□□□□□ -1.28
DDX56-204ENST00000431640 PRO0628Q9UI54 55 aa7.07□□□□□ -1.28
DDX56-204ENST00000431640 IGKV2D-30A0A075B6S6 120 aa7.06□□□□□ -1.28
DDX56-204ENST00000431640 PSPHP1O15172 72 aa7.06□□□□□ -1.28
DDX56-204ENST00000431640 A8MUU9 505 aa7.04□□□□□ -1.28
DDX56-204ENST00000431640 C20orf166-AS1Q96NR2 134 aa7.04□□□□□ -1.28
DDX56-204ENST00000431640 A8MUN3 132 aa7.03□□□□□ -1.28
DDX56-204ENST00000431640 C7orf65Q6ZTY9 151 aa7.03□□□□□ -1.28
DDX56-204ENST00000431640 LINC01558Q9Y6Z2 57 aa7.03□□□□□ -1.28
DDX56-204ENST00000431640 BRK1Q8WUW1 75 aa7.03□□□□□ -1.28
DDX56-204ENST00000431640 CHKB-CPT1BH3BT56 60 aa7.02□□□□□ -1.29
DDX56-204ENST00000431640 PRR15LQ9BU68 103 aa7.01□□□□□ -1.29
DDX56-204ENST00000431640 C9orf92A6NGG3 77 aa7□□□□□ -1.29
DDX56-204ENST00000431640 Q5VV11 94 aa7□□□□□ -1.29
DDX56-204ENST00000431640 Q75L30 129 aa6.97□□□□□ -1.29
DDX56-204ENST00000431640 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
DDX56-204ENST00000431640 J3QL48 77 aa6.91□□□□□ -1.3
DDX56-204ENST00000431640 HERC1Q15751 4861 aa6.9□□□□□ -1.31
DDX56-204ENST00000431640 A6NED7 52 aa6.87□□□□□ -1.31
DDX56-204ENST00000431640 SPINK7P58062 85 aa6.86□□□□□ -1.31
DDX56-204ENST00000431640 ATP11AUNQ6ZP68 121 aa6.85□□□□□ -1.31
DDX56-204ENST00000431640 SPTSSBQ8NFR3 76 aa6.85□□□□□ -1.31
DDX56-204ENST00000431640 A0A1B0GU69 56 aa6.83□□□□□ -1.32
DDX56-204ENST00000431640 CDC42SE1Q9NRR8 79 aa6.81□□□□□ -1.32
DDX56-204ENST00000431640 RPL37P61927 97 aaKnown RBP6.79□□□□□ -1.32
DDX56-204ENST00000431640 LCA10Q71F78 164 aa6.78□□□□□ -1.32
DDX56-204ENST00000431640 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
DDX56-204ENST00000431640 LPAP08519 4548 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms