RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CSMD3Q7Z407 3707 aa0.65□□□□□ -2.3
HMGB1P9-201ENST00000429856 APC2O95996 2303 aa0.65□□□□□ -2.3
HMGB1P9-201ENST00000429856 CACNA1EQ15878 2313 aa0.65□□□□□ -2.3
HMGB1P9-201ENST00000429856 SSPOA2VEC9 5147 aa0.65□□□□□ -2.31
HMGB1P9-201ENST00000429856 NDUFB1O75438 58 aa0.65□□□□□ -2.31
HMGB1P9-201ENST00000429856 COX7BP24311 80 aa0.65□□□□□ -2.31
HMGB1P9-201ENST00000429856 HEPN1Q6WQI6 88 aa0.65□□□□□ -2.31
HMGB1P9-201ENST00000429856 MYO15AQ9UKN7 3530 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 TENM3Q9P273 2699 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 CSMD2Q7Z408 3487 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 SPENQ96T58 3664 aaKnown RBP0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 CUBNO60494 3623 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 TRIOO75962 3097 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 ADGRG4Q8IZF6 3080 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 NEBP20929 6669 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 CSPG4Q6UVK1 2322 aa0.64□□□□□ -2.31
HMGB1P9-201ENST00000429856 SONP18583 2426 aaKnown RBP0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 SPTY2D1-AS1A0A0U1RR47 76 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 LOC730098B7Z3J9 87 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 HMGA1P17096 107 aaKnown RBP0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 DEFB106AQ8N104 65 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 DEFB124Q8NES8 71 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 USMG5Q96IX5 58 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 CHD7Q9P2D1 2997 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 FSIP2Q5CZC0 6907 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 DCHS2Q6V1P9 2916 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 DMBT1Q9UGM3 2413 aaPredicted RBP0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 KNL1Q8NG31 2342 aa0.63□□□□□ -2.31
HMGB1P9-201ENST00000429856 HIVEP1P15822 2718 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 SVEP1Q4LDE5 3571 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 SMIM31A0A1B0GVY4 71 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 DEFB133Q30KQ1 61 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 MACF1Q9UPN3 7388 aaKnown RBP0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 ATMQ13315 3056 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 DMDP11532 3685 aa0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 SYNE2Q8WXH0 6885 aaKnown RBP0.62□□□□□ -2.31
HMGB1P9-201ENST00000429856 H3BVH4 76 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 I3L3M4 83 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 COX6B1P14854 86 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 NREPQ16612 68 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 NCBP2-AS2Q69YL0 99 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 ITPR2Q14571 2701 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 TNCP24821 2201 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 DMXL2Q8TDJ6 3036 aa0.61□□□□□ -2.31
HMGB1P9-201ENST00000429856 STAB2Q8WWQ8 2551 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 LCE6AA0A183 80 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 CPSF4LA6NMK7 179 aaKnown RBP0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 SPRR1AP35321 89 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 RPL38P63173 70 aaKnown RBP0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 DEFB110Q30KQ9 67 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 HILPDAQ9Y5L2 63 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 PKDREJQ9NTG1 2253 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 AKAP9Q99996 3911 aa0.6□□□□□ -2.31
HMGB1P9-201ENST00000429856 MUC5BQ9HC84 5762 aaPredicted RBP0.59□□□□□ -2.31
HMGB1P9-201ENST00000429856 COX8AP10176 69 aa0.59□□□□□ -2.31
HMGB1P9-201ENST00000429856 SPRR1BP22528 89 aa0.59□□□□□ -2.31
HMGB1P9-201ENST00000429856 Q5VSD8 79 aa0.59□□□□□ -2.31
HMGB1P9-201ENST00000429856 COX14Q96I36 57 aa0.59□□□□□ -2.31
HMGB1P9-201ENST00000429856 ACANP16112 2415 aa0.59□□□□□ -2.32
HMGB1P9-201ENST00000429856 COL7A1Q02388 2944 aa0.59□□□□□ -2.32
HMGB1P9-201ENST00000429856 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
HMGB1P9-201ENST00000429856 AKAP6Q13023 2319 aa0.59□□□□□ -2.32
HMGB1P9-201ENST00000429856 LAMA5O15230 3695 aa0.59□□□□□ -2.32
HMGB1P9-201ENST00000429856 VPS13CQ709C8 3753 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 H0YGG7 62 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 CCL22O00626 93 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 STATHP02808 62 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 KRTAP2-3P0C7H8 128 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 KRTAP2-4Q9BYR9 128 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 KRTAP2-1Q9BYU5 128 aa0.58□□□□□ -2.32
HMGB1P9-201ENST00000429856 WNK2Q9Y3S1 2297 aa0.57□□□□□ -2.32
HMGB1P9-201ENST00000429856 MRPL33O75394 65 aaKnown RBP0.57□□□□□ -2.32
HMGB1P9-201ENST00000429856 APLNQ9ULZ1 77 aa0.57□□□□□ -2.32
HMGB1P9-201ENST00000429856 U3KQA8 63 aa0.57□□□□□ -2.32
HMGB1P9-201ENST00000429856 MAP1AP78559 2803 aaPredicted RBP0.56□□□□□ -2.32
HMGB1P9-201ENST00000429856 NDUFA4O00483 81 aa0.56□□□□□ -2.32
HMGB1P9-201ENST00000429856 PRH1P02810 166 aa0.56□□□□□ -2.32
HMGB1P9-201ENST00000429856 SPINK6Q6UWN8 80 aa0.56□□□□□ -2.32
HMGB1P9-201ENST00000429856 MGAQ8IWI9 3026 aa0.56□□□□□ -2.32
HMGB1P9-201ENST00000429856 LELP1Q5T871 98 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 RPS27LQ71UM5 84 aaKnown RBP0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 DEFB105AQ8NG35 78 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 ABRACLQ9P1F3 81 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 GNG13Q9P2W3 67 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 ALMS1Q8TCU4 4167 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 TACC2O95359 2948 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 LAMA1P25391 3075 aa0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 PRKDCP78527 4128 aaKnown RBP0.55□□□□□ -2.32
HMGB1P9-201ENST00000429856 ANK3Q12955 4377 aaKnown RBP0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 CMYA5Q8N3K9 4069 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 CENPEQ02224 2701 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 HMCN2Q8NDA2 5059 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 KMT2AQ03164 3969 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 RNF213Q63HN8 5207 aa0.54□□□□□ -2.32
HMGB1P9-201ENST00000429856 M0R1W7 72 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms