RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.76□□□□□ -1.33
HLA-F-219ENST00000429294 TMEM256-PLSCR3K7ERE1 68 aa6.76□□□□□ -1.33
HLA-F-219ENST00000429294 ACYP1P07311 99 aa6.76□□□□□ -1.33
HLA-F-219ENST00000429294 JMJD7-PLA2G4BH0Y9G9 81 aa6.74□□□□□ -1.33
HLA-F-219ENST00000429294 C21orf62-AS1Q17RA5 79 aa6.74□□□□□ -1.33
HLA-F-219ENST00000429294 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.74□□□□□ -1.33
HLA-F-219ENST00000429294 SS18L2Q9UHA2 77 aa6.74□□□□□ -1.33
HLA-F-219ENST00000429294 SIGMAR1Q99720 223 aa6.71□□□□□ -1.34
HLA-F-219ENST00000429294 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
HLA-F-219ENST00000429294 KRTAP9-8Q9BYQ0 159 aa6.7□□□□□ -1.34
HLA-F-219ENST00000429294 USH2AO75445 5202 aa6.7□□□□□ -1.34
HLA-F-219ENST00000429294 A8MUU9 505 aa6.68□□□□□ -1.34
HLA-F-219ENST00000429294 PDE6GP18545 87 aa6.68□□□□□ -1.34
HLA-F-219ENST00000429294 SSPOA2VEC9 5147 aa6.68□□□□□ -1.34
HLA-F-219ENST00000429294 FAM236DA0A1B0GTK5 79 aa6.67□□□□□ -1.34
HLA-F-219ENST00000429294 FAM236CP0DP71 79 aa6.67□□□□□ -1.34
HLA-F-219ENST00000429294 SCGB1A1P11684 91 aa6.67□□□□□ -1.34
HLA-F-219ENST00000429294 RBM3P98179 157 aaKnown RBP6.64□□□□□ -1.35
HLA-F-219ENST00000429294 LOC110117498A0A087WWA1 95 aa6.63□□□□□ -1.35
HLA-F-219ENST00000429294 CCKP06307 115 aa6.63□□□□□ -1.35
HLA-F-219ENST00000429294 A0A087WSZ3 146 aa6.62□□□□□ -1.35
HLA-F-219ENST00000429294 C14orf132Q9NPU4 83 aa6.62□□□□□ -1.35
HLA-F-219ENST00000429294 DSCR10P59022 87 aa6.61□□□□□ -1.35
HLA-F-219ENST00000429294 LINC00643Q86TS7 51 aa6.61□□□□□ -1.35
HLA-F-219ENST00000429294 DSCR8Q96T75 97 aa6.61□□□□□ -1.35
HLA-F-219ENST00000429294 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
HLA-F-219ENST00000429294 NDUFV3P56181 108 aaKnown RBP6.6□□□□□ -1.35
HLA-F-219ENST00000429294 MT2AP02795 61 aa6.59□□□□□ -1.35
HLA-F-219ENST00000429294 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
HLA-F-219ENST00000429294 FCGBPQ9Y6R7 5405 aaPredicted RBP6.58□□□□□ -1.36
HLA-F-219ENST00000429294 LINC00313P59037 77 aa6.58□□□□□ -1.36
HLA-F-219ENST00000429294 A0A1B0GW54 56 aa6.57□□□□□ -1.36
HLA-F-219ENST00000429294 MT-ATP8P03928 68 aa6.57□□□□□ -1.36
HLA-F-219ENST00000429294 KRTAP10-10P60014 251 aa6.57□□□□□ -1.36
HLA-F-219ENST00000429294 Q6ZQT0 140 aa6.57□□□□□ -1.36
HLA-F-219ENST00000429294 TRBV7-4A0A0J9YYF1 115 aa6.56□□□□□ -1.36
HLA-F-219ENST00000429294 ATP5EP2Q5VTU8 51 aa6.56□□□□□ -1.36
HLA-F-219ENST00000429294 PCP4P48539 62 aa6.55□□□□□ -1.36
HLA-F-219ENST00000429294 KRTAP19-1Q8IUB9 90 aa6.55□□□□□ -1.36
HLA-F-219ENST00000429294 UBL5Q9BZL1 73 aa6.54□□□□□ -1.36
HLA-F-219ENST00000429294 LINC00846Q9NV44 126 aa6.54□□□□□ -1.36
HLA-F-219ENST00000429294 MT1FP04733 61 aa6.53□□□□□ -1.36
HLA-F-219ENST00000429294 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
HLA-F-219ENST00000429294 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
HLA-F-219ENST00000429294 LCE2BO14633 110 aa6.52□□□□□ -1.37
HLA-F-219ENST00000429294 A0A1W2PNM2 257 aa6.5□□□□□ -1.37
HLA-F-219ENST00000429294 HRES1P13985 223 aa6.5□□□□□ -1.37
HLA-F-219ENST00000429294 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
HLA-F-219ENST00000429294 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
HLA-F-219ENST00000429294 A0A1B0GV72 72 aa6.49□□□□□ -1.37
HLA-F-219ENST00000429294 IGHV6-1A0A0B4J1U7 121 aa6.46□□□□□ -1.38
HLA-F-219ENST00000429294 NOTCH2NLQ7Z3S9 236 aa6.46□□□□□ -1.38
HLA-F-219ENST00000429294 CXCL6P80162 114 aa6.45□□□□□ -1.38
HLA-F-219ENST00000429294 DEFB116Q30KQ4 102 aa6.44□□□□□ -1.38
HLA-F-219ENST00000429294 Q6ZVQ6 151 aa6.44□□□□□ -1.38
HLA-F-219ENST00000429294 SYNE2Q8WXH0 6885 aaKnown RBP6.44□□□□□ -1.38
HLA-F-219ENST00000429294 MACF1Q9UPN3 7388 aaKnown RBP6.42□□□□□ -1.38
HLA-F-219ENST00000429294 LINC00472Q9H8W2 130 aa6.42□□□□□ -1.38
HLA-F-219ENST00000429294 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
HLA-F-219ENST00000429294 IGKV3D-7A0A0C4DH55 119 aa6.4□□□□□ -1.38
HLA-F-219ENST00000429294 NREPQ16612 68 aa6.4□□□□□ -1.38
HLA-F-219ENST00000429294 ANAPC13Q9BS18 74 aa6.4□□□□□ -1.38
HLA-F-219ENST00000429294 HIST1H4AP62805 103 aaKnown RBP6.39□□□□□ -1.39
HLA-F-219ENST00000429294 FAM236AA0A1B0GUQ0 79 aa6.38□□□□□ -1.39
HLA-F-219ENST00000429294 FAM236BA0A1B0GV22 79 aa6.38□□□□□ -1.39
HLA-F-219ENST00000429294 ATOX1O00244 68 aa6.38□□□□□ -1.39
HLA-F-219ENST00000429294 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
HLA-F-219ENST00000429294 A8MWP4 228 aa6.37□□□□□ -1.39
HLA-F-219ENST00000429294 SPINK7P58062 85 aa6.37□□□□□ -1.39
HLA-F-219ENST00000429294 KRTAP19-6Q3LI70 58 aa6.37□□□□□ -1.39
HLA-F-219ENST00000429294 ZCCHC13Q8WW36 166 aaKnown RBP6.37□□□□□ -1.39
HLA-F-219ENST00000429294 BPY2O14599 106 aa6.35□□□□□ -1.39
HLA-F-219ENST00000429294 J3KT08 172 aa6.33□□□□□ -1.4
HLA-F-219ENST00000429294 SMIM20Q8N5G0 67 aa6.33□□□□□ -1.4
HLA-F-219ENST00000429294 NDUFB1O75438 58 aa6.31□□□□□ -1.4
HLA-F-219ENST00000429294 WFDC13Q8IUB5 93 aa6.3□□□□□ -1.4
HLA-F-219ENST00000429294 A0A087WVE0 104 aa6.29□□□□□ -1.4
HLA-F-219ENST00000429294 UQCRQO14949 82 aa6.28□□□□□ -1.4
HLA-F-219ENST00000429294 COX7CP15954 63 aa6.27□□□□□ -1.41
HLA-F-219ENST00000429294 SERP2Q8N6R1 65 aa6.27□□□□□ -1.41
HLA-F-219ENST00000429294 Q8N9P0 234 aaPredicted RBP6.27□□□□□ -1.41
HLA-F-219ENST00000429294 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
HLA-F-219ENST00000429294 TRAV7A0A075B6U4 112 aa6.23□□□□□ -1.41
HLA-F-219ENST00000429294 C8orf17Q9NRJ1 99 aa6.22□□□□□ -1.41
HLA-F-219ENST00000429294 CCDC179H3BU77 68 aa6.2□□□□□ -1.42
HLA-F-219ENST00000429294 H1FX-AS1Q4G0G2 97 aa6.19□□□□□ -1.42
HLA-F-219ENST00000429294 K7EQZ3 153 aa6.18□□□□□ -1.42
HLA-F-219ENST00000429294 Q8N9L7 120 aa6.18□□□□□ -1.42
HLA-F-219ENST00000429294 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
HLA-F-219ENST00000429294 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
HLA-F-219ENST00000429294 OCR1Q9BZK8 76 aa6.14□□□□□ -1.43
HLA-F-219ENST00000429294 KLKP1Q107X0 134 aa6.12□□□□□ -1.43
HLA-F-219ENST00000429294 NDUFC1O43677 76 aa6.11□□□□□ -1.43
HLA-F-219ENST00000429294 TMEM254Q8TBM7 123 aa6.11□□□□□ -1.43
HLA-F-219ENST00000429294 MRPL34Q9BQ48 92 aaKnown RBP6.11□□□□□ -1.43
HLA-F-219ENST00000429294 NDUFS5O43920 106 aa6.1□□□□□ -1.43
HLA-F-219ENST00000429294 CASC2Q6XLA1 102 aa6.1□□□□□ -1.43
HLA-F-219ENST00000429294 TMEM258P61165 79 aa6.09□□□□□ -1.43
HLA-F-219ENST00000429294 C5orf47Q569G3 176 aa6.09□□□□□ -1.43
HLA-F-219ENST00000429294 C20orf197Q8N268 126 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms