RNA–Protein interactions for RNA: ENST00000428154.5

PMPCB-202, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 1 (best) BASIC

Gene PMPCB, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-202ENST00000428154 DNHD1Q96M86 4753 aa11.78□□□□□ -0.52
PMPCB-202ENST00000428154 V9GYY9 64 aa11.77□□□□□ -0.52
PMPCB-202ENST00000428154 MPLKIPQ8TAP9 179 aa11.77□□□□□ -0.53
PMPCB-202ENST00000428154 PRR4Q16378 134 aa11.76□□□□□ -0.53
PMPCB-202ENST00000428154 SPINK6Q6UWN8 80 aa11.74□□□□□ -0.53
PMPCB-202ENST00000428154 FRAS1Q86XX4 4008 aa11.74□□□□□ -0.53
PMPCB-202ENST00000428154 DNAH5Q8TE73 4624 aa11.73□□□□□ -0.53
PMPCB-202ENST00000428154 DNAH11Q96DT5 4516 aa11.72□□□□□ -0.53
PMPCB-202ENST00000428154 LOC101927531A0A1B0GV80 90 aa11.71□□□□□ -0.54
PMPCB-202ENST00000428154 A0A087X002 238 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 C1orf195Q5TG92 126 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 NOTCH2NLQ7Z3S9 236 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 LIMD2Q9BT23 127 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 KRTAP13-2Q52LG2 175 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 LINC00336Q6ZUF6 198 aa11.69□□□□□ -0.54
PMPCB-202ENST00000428154 PRO0628Q9UI54 55 aa11.68□□□□□ -0.54
PMPCB-202ENST00000428154 LINC00313P59037 77 aa11.64□□□□□ -0.55
PMPCB-202ENST00000428154 KRTAP1-4P0C5Y4 121 aa11.63□□□□□ -0.55
PMPCB-202ENST00000428154 PCOTHQ58A44 107 aa11.63□□□□□ -0.55
PMPCB-202ENST00000428154 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
PMPCB-202ENST00000428154 PKD1P98161 4303 aa11.61□□□□□ -0.55
PMPCB-202ENST00000428154 COA5Q86WW8 74 aa11.59□□□□□ -0.55
PMPCB-202ENST00000428154 Q8N9P0 234 aaPredicted RBP11.58□□□□□ -0.56
PMPCB-202ENST00000428154 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
PMPCB-202ENST00000428154 C4orf48Q5BLP8 95 aa11.57□□□□□ -0.56
PMPCB-202ENST00000428154 FAT2Q9NYQ8 4349 aa11.56□□□□□ -0.56
PMPCB-202ENST00000428154 SPINK1P00995 79 aa11.55□□□□□ -0.56
PMPCB-202ENST00000428154 PLA2G1BP04054 148 aaKnown RBP11.54□□□□□ -0.56
PMPCB-202ENST00000428154 Q5W150 140 aa11.54□□□□□ -0.56
PMPCB-202ENST00000428154 TYMSOSQ8TAI1 123 aa11.52□□□□□ -0.56
PMPCB-202ENST00000428154 BRK1Q8WUW1 75 aa11.52□□□□□ -0.56
PMPCB-202ENST00000428154 RPS29P62273 56 aaKnown RBP11.52□□□□□ -0.57
PMPCB-202ENST00000428154 LRP1BQ9NZR2 4599 aa11.48□□□□□ -0.57
PMPCB-202ENST00000428154 SPAG11AQ6PDA7 123 aa11.47□□□□□ -0.57
PMPCB-202ENST00000428154 PSPHP1O15172 72 aa11.46□□□□□ -0.58
PMPCB-202ENST00000428154 KRTAP16-1A8MUX0 517 aa11.45□□□□□ -0.58
PMPCB-202ENST00000428154 A8MUN3 132 aa11.42□□□□□ -0.58
PMPCB-202ENST00000428154 HRES1P13985 223 aa11.42□□□□□ -0.58
PMPCB-202ENST00000428154 ACYP2P14621 99 aa11.4□□□□□ -0.58
PMPCB-202ENST00000428154 HYDINQ4G0P3 5121 aa11.4□□□□□ -0.58
PMPCB-202ENST00000428154 IGKV2-30P06310 120 aa11.4□□□□□ -0.58
PMPCB-202ENST00000428154 Q5VV11 94 aa11.39□□□□□ -0.59
PMPCB-202ENST00000428154 LINC00304Q8N9R0 145 aa11.38□□□□□ -0.59
PMPCB-202ENST00000428154 LINC01558Q9Y6Z2 57 aa11.38□□□□□ -0.59
PMPCB-202ENST00000428154 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
PMPCB-202ENST00000428154 PRR15LQ9BU68 103 aa11.35□□□□□ -0.59
PMPCB-202ENST00000428154 Q75L30 129 aa11.35□□□□□ -0.59
PMPCB-202ENST00000428154 DMAC1Q96GE9 116 aa11.35□□□□□ -0.59
PMPCB-202ENST00000428154 A0A1B0GVY2 172 aa11.34□□□□□ -0.59
PMPCB-202ENST00000428154 PRR26Q8N8Z3 221 aa11.29□□□□□ -0.6
PMPCB-202ENST00000428154 CHKB-CPT1BH3BT56 60 aa11.29□□□□□ -0.6
PMPCB-202ENST00000428154 SACSQ9NZJ4 4579 aa11.25□□□□□ -0.61
PMPCB-202ENST00000428154 RETNLBQ9BQ08 111 aa11.23□□□□□ -0.61
PMPCB-202ENST00000428154 SMR3BP02814 79 aaPredicted RBP11.2□□□□□ -0.62
PMPCB-202ENST00000428154 KRTAP10-4P60372 401 aaPredicted RBP11.19□□□□□ -0.62
PMPCB-202ENST00000428154 IGKV2D-30A0A075B6S6 120 aa11.17□□□□□ -0.62
PMPCB-202ENST00000428154 A6NED7 52 aa11.15□□□□□ -0.62
PMPCB-202ENST00000428154 C7orf65Q6ZTY9 151 aa11.15□□□□□ -0.63
PMPCB-202ENST00000428154 DYNC1H1Q14204 4646 aaKnown RBP11.13□□□□□ -0.63
PMPCB-202ENST00000428154 PKHD1P08F94 4074 aa11.12□□□□□ -0.63
PMPCB-202ENST00000428154 CDC42SE1Q9NRR8 79 aa11.09□□□□□ -0.63
PMPCB-202ENST00000428154 C20orf166-AS1Q96NR2 134 aa11.09□□□□□ -0.63
PMPCB-202ENST00000428154 A8MUU9 505 aa11.08□□□□□ -0.64
PMPCB-202ENST00000428154 ATP11AUNQ6ZP68 121 aa11.06□□□□□ -0.64
PMPCB-202ENST00000428154 SEC61GP60059 68 aa11.03□□□□□ -0.64
PMPCB-202ENST00000428154 LCA10Q71F78 164 aa11.03□□□□□ -0.64
PMPCB-202ENST00000428154 APOBP04114 4563 aaKnown RBP11.02□□□□□ -0.64
PMPCB-202ENST00000428154 PKHD1L1Q86WI1 4243 aa11.01□□□□□ -0.65
PMPCB-202ENST00000428154 A0A1B0GU69 56 aa10.97□□□□□ -0.65
PMPCB-202ENST00000428154 SPINK7P58062 85 aa10.95□□□□□ -0.66
PMPCB-202ENST00000428154 PMAIP1Q13794 54 aa10.94□□□□□ -0.66
PMPCB-202ENST00000428154 A8MU10 97 aa10.93□□□□□ -0.66
PMPCB-202ENST00000428154 C9orf92A6NGG3 77 aa10.92□□□□□ -0.66
PMPCB-202ENST00000428154 SPTSSBQ8NFR3 76 aa10.92□□□□□ -0.66
PMPCB-202ENST00000428154 FAT1Q14517 4588 aa10.88□□□□□ -0.67
PMPCB-202ENST00000428154 RYR2Q92736 4967 aa10.87□□□□□ -0.67
PMPCB-202ENST00000428154 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
PMPCB-202ENST00000428154 Q8N1X5 172 aa10.82□□□□□ -0.68
PMPCB-202ENST00000428154 UQCR11O14957 56 aa10.79□□□□□ -0.68
PMPCB-202ENST00000428154 Q5VSD8 79 aa10.78□□□□□ -0.68
PMPCB-202ENST00000428154 SPATA8Q6RVD6 105 aa10.78□□□□□ -0.68
PMPCB-202ENST00000428154 A6NN06 94 aa10.77□□□□□ -0.69
PMPCB-202ENST00000428154 FLG2Q5D862 2391 aaPredicted RBP10.77□□□□□ -0.69
PMPCB-202ENST00000428154 KTN1-AS1Q86SY8 53 aa10.72□□□□□ -0.69
PMPCB-202ENST00000428154 MIR22HGQ0VDD5 57 aa10.7□□□□□ -0.7
PMPCB-202ENST00000428154 COX6B2Q6YFQ2 88 aa10.67□□□□□ -0.7
PMPCB-202ENST00000428154 KRTAP3-1Q9BYR8 98 aa10.66□□□□□ -0.7
PMPCB-202ENST00000428154 KMT2CQ8NEZ4 4911 aaKnown RBP10.63□□□□□ -0.71
PMPCB-202ENST00000428154 RPL37P61927 97 aaKnown RBP10.62□□□□□ -0.71
PMPCB-202ENST00000428154 TNXBP22105 4242 aa10.61□□□□□ -0.71
PMPCB-202ENST00000428154 FAT3Q8TDW7 4589 aa10.6□□□□□ -0.71
PMPCB-202ENST00000428154 HSPG2P98160 4391 aa10.55□□□□□ -0.72
PMPCB-202ENST00000428154 XP32Q5T750 250 aa10.51□□□□□ -0.73
PMPCB-202ENST00000428154 MT1HL1P0DM35 61 aa10.45□□□□□ -0.74
PMPCB-202ENST00000428154 LRP1Q07954 4544 aaKnown RBP10.45□□□□□ -0.74
PMPCB-202ENST00000428154 RYR1P21817 5038 aa10.44□□□□□ -0.74
PMPCB-202ENST00000428154 A0A1B0GU33 70 aa10.43□□□□□ -0.74
PMPCB-202ENST00000428154 H1FX-AS1Q4G0G2 97 aa10.4□□□□□ -0.74
PMPCB-202ENST00000428154 DMBT1Q9UGM3 2413 aaPredicted RBP10.37□□□□□ -0.75
PMPCB-202ENST00000428154 KRTAP17-1Q9BYP8 105 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms