RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 PRR15Q8IV56 129 aa10.31□□□□□ -0.76
AC055811.2-201ENST00000427497 SPINK1P00995 79 aa10.31□□□□□ -0.76
AC055811.2-201ENST00000427497 C4orf48Q5BLP8 95 aa10.31□□□□□ -0.76
AC055811.2-201ENST00000427497 TNXBP22105 4242 aa10.3□□□□□ -0.76
AC055811.2-201ENST00000427497 LINC00304Q8N9R0 145 aa10.3□□□□□ -0.76
AC055811.2-201ENST00000427497 LIMD2Q9BT23 127 aa10.29□□□□□ -0.76
AC055811.2-201ENST00000427497 SPAG11AQ6PDA7 123 aa10.28□□□□□ -0.76
AC055811.2-201ENST00000427497 RPS29P62273 56 aaKnown RBP10.27□□□□□ -0.77
AC055811.2-201ENST00000427497 NDUFB1O75438 58 aa10.26□□□□□ -0.77
AC055811.2-201ENST00000427497 UBR4Q5T4S7 5183 aa10.25□□□□□ -0.77
AC055811.2-201ENST00000427497 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
AC055811.2-201ENST00000427497 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
AC055811.2-201ENST00000427497 A0A1B0GVX0 72 aa10.22□□□□□ -0.77
AC055811.2-201ENST00000427497 KRTAP10-8P60410 259 aa10.21□□□□□ -0.78
AC055811.2-201ENST00000427497 SERP2Q8N6R1 65 aa10.2□□□□□ -0.78
AC055811.2-201ENST00000427497 MMP24-AS1A0A0U1RRL7 71 aa10.19□□□□□ -0.78
AC055811.2-201ENST00000427497 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
AC055811.2-201ENST00000427497 WFDC13Q8IUB5 93 aa10.18□□□□□ -0.78
AC055811.2-201ENST00000427497 IGHV6-1A0A0B4J1U7 121 aa10.17□□□□□ -0.78
AC055811.2-201ENST00000427497 C8orf17Q9NRJ1 99 aa10.17□□□□□ -0.78
AC055811.2-201ENST00000427497 TRAV7A0A075B6U4 112 aa10.16□□□□□ -0.78
AC055811.2-201ENST00000427497 COX7CP15954 63 aa10.16□□□□□ -0.78
AC055811.2-201ENST00000427497 CASC2Q6XLA1 102 aa10.16□□□□□ -0.78
AC055811.2-201ENST00000427497 OCR1Q9BZK8 76 aa10.16□□□□□ -0.78
AC055811.2-201ENST00000427497 UQCRQO14949 82 aa10.13□□□□□ -0.79
AC055811.2-201ENST00000427497 hDV103S1A0JD37 113 aa10.12□□□□□ -0.79
AC055811.2-201ENST00000427497 CCDC179H3BU77 68 aa10.12□□□□□ -0.79
AC055811.2-201ENST00000427497 NOTCH2NLQ7Z3S9 236 aa10.12□□□□□ -0.79
AC055811.2-201ENST00000427497 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
AC055811.2-201ENST00000427497 LRP2P98164 4655 aa10.06□□□□□ -0.8
AC055811.2-201ENST00000427497 TMEM254Q8TBM7 123 aa10.06□□□□□ -0.8
AC055811.2-201ENST00000427497 LINC00313P59037 77 aa10.04□□□□□ -0.8
AC055811.2-201ENST00000427497 MRPL34Q9BQ48 92 aaKnown RBP10.04□□□□□ -0.8
AC055811.2-201ENST00000427497 KRTAP16-1A8MUX0 517 aa9.98□□□□□ -0.81
AC055811.2-201ENST00000427497 C20orf197Q8N268 126 aa9.98□□□□□ -0.81
AC055811.2-201ENST00000427497 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
AC055811.2-201ENST00000427497 RETNLBQ9BQ08 111 aa9.96□□□□□ -0.81
AC055811.2-201ENST00000427497 TP53AIP1Q9HCN2 124 aa9.96□□□□□ -0.81
AC055811.2-201ENST00000427497 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
AC055811.2-201ENST00000427497 KLKP1Q107X0 134 aa9.95□□□□□ -0.82
AC055811.2-201ENST00000427497 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
AC055811.2-201ENST00000427497 CYSTM1Q9H1C7 97 aa9.93□□□□□ -0.82
AC055811.2-201ENST00000427497 NDUFS5O43920 106 aa9.93□□□□□ -0.82
AC055811.2-201ENST00000427497 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
AC055811.2-201ENST00000427497 SNURFQ9Y675 71 aa9.9□□□□□ -0.82
AC055811.2-201ENST00000427497 TRAV22A0A0B4J277 110 aa9.88□□□□□ -0.83
AC055811.2-201ENST00000427497 LPAP08519 4548 aa9.88□□□□□ -0.83
AC055811.2-201ENST00000427497 H0Y9P7 68 aa9.87□□□□□ -0.83
AC055811.2-201ENST00000427497 FP248Q71RG6 208 aaPredicted RBP9.87□□□□□ -0.83
AC055811.2-201ENST00000427497 MP68P56378 58 aa9.87□□□□□ -0.83
AC055811.2-201ENST00000427497 ZCCHC13Q8WW36 166 aaKnown RBP9.87□□□□□ -0.83
AC055811.2-201ENST00000427497 H3BPC8 53 aa9.84□□□□□ -0.83
AC055811.2-201ENST00000427497 KRTAP13-3Q3SY46 172 aa9.83□□□□□ -0.84
AC055811.2-201ENST00000427497 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
AC055811.2-201ENST00000427497 Q5W150 140 aa9.82□□□□□ -0.84
AC055811.2-201ENST00000427497 H7BZZ5 65 aa9.81□□□□□ -0.84
AC055811.2-201ENST00000427497 LINC00208Q96KT6 92 aa9.81□□□□□ -0.84
AC055811.2-201ENST00000427497 NDUFC1O43677 76 aa9.8□□□□□ -0.84
AC055811.2-201ENST00000427497 PRR4Q16378 134 aa9.79□□□□□ -0.84
AC055811.2-201ENST00000427497 C1orf64Q8NEQ6 169 aa9.78□□□□□ -0.84
AC055811.2-201ENST00000427497 C20orf166-AS1Q96NR2 134 aa9.77□□□□□ -0.84
AC055811.2-201ENST00000427497 IGLV7-46A0A075B6I9 117 aa9.77□□□□□ -0.85
AC055811.2-201ENST00000427497 A8MUU9 505 aa9.77□□□□□ -0.85
AC055811.2-201ENST00000427497 TMEM258P61165 79 aa9.74□□□□□ -0.85
AC055811.2-201ENST00000427497 LOC101927531A0A1B0GV80 90 aa9.69□□□□□ -0.86
AC055811.2-201ENST00000427497 Q75L30 129 aa9.68□□□□□ -0.86
AC055811.2-201ENST00000427497 MUC2Q02817 5179 aa9.64□□□□□ -0.87
AC055811.2-201ENST00000427497 CYP4F30PQ9H0H9 118 aa9.64□□□□□ -0.87
AC055811.2-201ENST00000427497 FAM236DA0A1B0GTK5 79 aa9.63□□□□□ -0.87
AC055811.2-201ENST00000427497 IGKV2-30P06310 120 aa9.63□□□□□ -0.87
AC055811.2-201ENST00000427497 FAM236CP0DP71 79 aa9.63□□□□□ -0.87
AC055811.2-201ENST00000427497 XP32Q5T750 250 aa9.62□□□□□ -0.87
AC055811.2-201ENST00000427497 TPRXLQ17RH7 258 aa9.61□□□□□ -0.87
AC055811.2-201ENST00000427497 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
AC055811.2-201ENST00000427497 PCOTHQ58A44 107 aa9.59□□□□□ -0.87
AC055811.2-201ENST00000427497 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
AC055811.2-201ENST00000427497 SPANXA2-OT1Q8N9U9 137 aa9.58□□□□□ -0.88
AC055811.2-201ENST00000427497 IGKV2D-30A0A075B6S6 120 aa9.54□□□□□ -0.88
AC055811.2-201ENST00000427497 C7orf65Q6ZTY9 151 aa9.51□□□□□ -0.89
AC055811.2-201ENST00000427497 ATP11AUNQ6ZP68 121 aa9.5□□□□□ -0.89
AC055811.2-201ENST00000427497 HRES1P13985 223 aa9.47□□□□□ -0.89
AC055811.2-201ENST00000427497 RPS28P62857 69 aaKnown RBP9.45□□□□□ -0.9
AC055811.2-201ENST00000427497 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
AC055811.2-201ENST00000427497 SPINK7P58062 85 aa9.43□□□□□ -0.9
AC055811.2-201ENST00000427497 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
AC055811.2-201ENST00000427497 DMAC1Q96GE9 116 aa9.35□□□□□ -0.91
AC055811.2-201ENST00000427497 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
AC055811.2-201ENST00000427497 FAT4Q6V0I7 4981 aa9.31□□□□□ -0.92
AC055811.2-201ENST00000427497 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
AC055811.2-201ENST00000427497 ACYP2P14621 99 aa9.27□□□□□ -0.93
AC055811.2-201ENST00000427497 COA5Q86WW8 74 aa9.27□□□□□ -0.93
AC055811.2-201ENST00000427497 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
AC055811.2-201ENST00000427497 A8MUN3 132 aa9.23□□□□□ -0.93
AC055811.2-201ENST00000427497 KRTAP3-1Q9BYR8 98 aa9.22□□□□□ -0.93
AC055811.2-201ENST00000427497 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
AC055811.2-201ENST00000427497 SMIM26A0A096LP01 95 aa9.19□□□□□ -0.94
AC055811.2-201ENST00000427497 KRTAP4-1Q9BYQ7 146 aa9.18□□□□□ -0.94
AC055811.2-201ENST00000427497 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.94
AC055811.2-201ENST00000427497 MPLKIPQ8TAP9 179 aa9.14□□□□□ -0.95
AC055811.2-201ENST00000427497 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms