RNA–Protein interactions for RNA: ENST00000424214.5

GPN1-203, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2 BASIC

Gene GPN1, Length 1,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-203ENST00000424214 KRTAP1-1Q07627 177 aa4.29□□□□□ -1.72
GPN1-203ENST00000424214 WWC2-AS2Q96NR7 200 aa4.29□□□□□ -1.72
GPN1-203ENST00000424214 NBEAL2Q6ZNJ1 2754 aa4.29□□□□□ -1.72
GPN1-203ENST00000424214 OTOGQ6ZRI0 2925 aa4.29□□□□□ -1.72
GPN1-203ENST00000424214 IGKV2D-30A0A075B6S6 120 aa4.29□□□□□ -1.72
GPN1-203ENST00000424214 FBN2P35556 2912 aa4.28□□□□□ -1.72
GPN1-203ENST00000424214 P0C880 135 aa4.28□□□□□ -1.72
GPN1-203ENST00000424214 HECTD1Q9ULT8 2610 aa4.28□□□□□ -1.72
GPN1-203ENST00000424214 UBR5O95071 2799 aaPredicted RBP4.28□□□□□ -1.72
GPN1-203ENST00000424214 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
GPN1-203ENST00000424214 H0YAA0 97 aa4.26□□□□□ -1.73
GPN1-203ENST00000424214 K7ERS5 55 aa4.26□□□□□ -1.73
GPN1-203ENST00000424214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.26□□□□□ -1.73
GPN1-203ENST00000424214 J3QKU1 62 aa4.25□□□□□ -1.73
GPN1-203ENST00000424214 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
GPN1-203ENST00000424214 ANAPC11Q9NYG5 84 aa4.25□□□□□ -1.73
GPN1-203ENST00000424214 SONP18583 2426 aaKnown RBP4.25□□□□□ -1.73
GPN1-203ENST00000424214 PANO1I0J062 215 aa4.24□□□□□ -1.73
GPN1-203ENST00000424214 NUPR2A6NF83 97 aa4.24□□□□□ -1.73
GPN1-203ENST00000424214 NF1P21359 2839 aa4.23□□□□□ -1.73
GPN1-203ENST00000424214 FLNCQ14315 2725 aa4.23□□□□□ -1.73
GPN1-203ENST00000424214 Q6ZSA8 131 aa4.22□□□□□ -1.73
GPN1-203ENST00000424214 MTORP42345 2549 aa4.21□□□□□ -1.73
GPN1-203ENST00000424214 HIVEP1P15822 2718 aa4.19□□□□□ -1.74
GPN1-203ENST00000424214 A0A1B0GU33 70 aa4.19□□□□□ -1.74
GPN1-203ENST00000424214 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
GPN1-203ENST00000424214 POLQO75417 2590 aa4.19□□□□□ -1.74
GPN1-203ENST00000424214 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 SPACA4Q8TDM5 124 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 PSORS1C2Q9UIG4 136 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 NIPBLQ6KC79 2804 aaeCLIP4.18□□□□□ -1.74
GPN1-203ENST00000424214 KRTAP16-1A8MUX0 517 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 LCE1DQ5T752 114 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 SSBP3-AS1Q7Z2R9 100 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 SETD2Q9BYW2 2564 aaPredicted RBP4.18□□□□□ -1.74
GPN1-203ENST00000424214 CUBNO60494 3623 aa4.18□□□□□ -1.74
GPN1-203ENST00000424214 KRTAP4-9Q9BYQ8 210 aa4.17□□□□□ -1.74
GPN1-203ENST00000424214 A0A087WTM6 91 aa4.16□□□□□ -1.74
GPN1-203ENST00000424214 SPINK1P00995 79 aa4.16□□□□□ -1.74
GPN1-203ENST00000424214 KRTAP1-5Q9BYS1 174 aa4.15□□□□□ -1.74
GPN1-203ENST00000424214 KRTAP10-11P60412 298 aa4.15□□□□□ -1.75
GPN1-203ENST00000424214 CCDC168Q8NDH2 2452 aa4.15□□□□□ -1.75
GPN1-203ENST00000424214 NOTCH2Q04721 2471 aa4.14□□□□□ -1.75
GPN1-203ENST00000424214 ZNF469Q96JG9 3925 aaPredicted RBP4.14□□□□□ -1.75
GPN1-203ENST00000424214 FLNAP21333 2647 aaKnown RBP4.14□□□□□ -1.75
GPN1-203ENST00000424214 CIRBP-AS1Q8TBR5 109 aa4.14□□□□□ -1.75
GPN1-203ENST00000424214 ITPR2Q14571 2701 aa4.14□□□□□ -1.75
GPN1-203ENST00000424214 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
GPN1-203ENST00000424214 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
GPN1-203ENST00000424214 UBE2DNLQ8IWF7 75 aa4.12□□□□□ -1.75
GPN1-203ENST00000424214 ANK2Q01484 3957 aa4.12□□□□□ -1.75
GPN1-203ENST00000424214 CENPEQ02224 2701 aa4.11□□□□□ -1.75
GPN1-203ENST00000424214 TYMSOSQ8TAI1 123 aa4.1□□□□□ -1.75
GPN1-203ENST00000424214 Q8N1X5 172 aa4.09□□□□□ -1.76
GPN1-203ENST00000424214 CRIPTQ9P021 101 aa4.09□□□□□ -1.76
GPN1-203ENST00000424214 TRRAPQ9Y4A5 3859 aa4.08□□□□□ -1.76
GPN1-203ENST00000424214 PDZD2O15018 2839 aa4.06□□□□□ -1.76
GPN1-203ENST00000424214 SRRM2Q9UQ35 2752 aaKnown RBP4.06□□□□□ -1.76
GPN1-203ENST00000424214 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
GPN1-203ENST00000424214 PKD1L1Q8TDX9 2849 aa4.05□□□□□ -1.76
GPN1-203ENST00000424214 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
GPN1-203ENST00000424214 Q6ZRN7 208 aaPredicted RBP4.04□□□□□ -1.76
GPN1-203ENST00000424214 TPRXLQ17RH7 258 aa4.04□□□□□ -1.76
GPN1-203ENST00000424214 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 DNAH3Q8TD57 4116 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 NBDYA0A0U1RRE5 68 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 SMR3AQ99954 134 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 APLNQ9ULZ1 77 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 VWFP04275 2813 aa4.03□□□□□ -1.76
GPN1-203ENST00000424214 TENM3Q9P273 2699 aa4.02□□□□□ -1.77
GPN1-203ENST00000424214 FRAS1Q86XX4 4008 aa4.02□□□□□ -1.77
GPN1-203ENST00000424214 FBN1P35555 2871 aaKnown RBP4.02□□□□□ -1.77
GPN1-203ENST00000424214 ACANP16112 2415 aa4.01□□□□□ -1.77
GPN1-203ENST00000424214 KRTAP21-3Q3LHN1 58 aa4.01□□□□□ -1.77
GPN1-203ENST00000424214 CSMD3Q7Z407 3707 aa4□□□□□ -1.77
GPN1-203ENST00000424214 LUZP6Q538Z0 58 aa4□□□□□ -1.77
GPN1-203ENST00000424214 DNAH8Q96JB1 4490 aa3.99□□□□□ -1.77
GPN1-203ENST00000424214 DNAH9Q9NYC9 4486 aa3.99□□□□□ -1.77
GPN1-203ENST00000424214 FLG2Q5D862 2391 aaPredicted RBP3.99□□□□□ -1.77
GPN1-203ENST00000424214 LYSTQ99698 3801 aa3.98□□□□□ -1.77
GPN1-203ENST00000424214 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
GPN1-203ENST00000424214 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.77
GPN1-203ENST00000424214 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
GPN1-203ENST00000424214 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
GPN1-203ENST00000424214 KRTAP4-5Q9BYR2 181 aa3.95□□□□□ -1.78
GPN1-203ENST00000424214 DNHD1Q96M86 4753 aa3.94□□□□□ -1.78
GPN1-203ENST00000424214 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
GPN1-203ENST00000424214 KRTAP24-1Q3LI83 254 aa3.94□□□□□ -1.78
GPN1-203ENST00000424214 CMYA5Q8N3K9 4069 aa3.93□□□□□ -1.78
GPN1-203ENST00000424214 MEGF8Q7Z7M0 2845 aa3.93□□□□□ -1.78
GPN1-203ENST00000424214 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
GPN1-203ENST00000424214 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
GPN1-203ENST00000424214 C10orf95Q9H7T3 257 aa3.92□□□□□ -1.78
GPN1-203ENST00000424214 DNAH7Q8WXX0 4024 aa3.92□□□□□ -1.78
GPN1-203ENST00000424214 DYNC2H1Q8NCM8 4307 aaKnown RBP3.92□□□□□ -1.78
GPN1-203ENST00000424214 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
GPN1-203ENST00000424214 NBEAL1Q6ZS30 2694 aa3.9□□□□□ -1.79
GPN1-203ENST00000424214 NSD1Q96L73 2696 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms