RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 NDUFS5O43920 106 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 SPAG11AQ6PDA7 123 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 IGHV6-1A0A0B4J1U7 121 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 A6NED7 52 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 MOBPQ13875 183 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 C14orf177Q52M58 125 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 KRTAP13-1Q8IUC0 172 aa8.63□□□□□ -1.03
MSH5-206ENST00000423982 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
MSH5-206ENST00000423982 PKHD1P08F94 4074 aa8.62□□□□□ -1.03
MSH5-206ENST00000423982 RYR2Q92736 4967 aa8.62□□□□□ -1.03
MSH5-206ENST00000423982 A0A087X002 238 aa8.61□□□□□ -1.03
MSH5-206ENST00000423982 NOTCH2NLQ7Z3S9 236 aa8.61□□□□□ -1.03
MSH5-206ENST00000423982 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
MSH5-206ENST00000423982 C8orf17Q9NRJ1 99 aa8.6□□□□□ -1.03
MSH5-206ENST00000423982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
MSH5-206ENST00000423982 RYR3Q15413 4870 aa8.59□□□□□ -1.03
MSH5-206ENST00000423982 Q75L30 129 aa8.59□□□□□ -1.03
MSH5-206ENST00000423982 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
MSH5-206ENST00000423982 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
MSH5-206ENST00000423982 KRTAP10-2P60368 255 aa8.58□□□□□ -1.04
MSH5-206ENST00000423982 DNAH8Q96JB1 4490 aa8.58□□□□□ -1.04
MSH5-206ENST00000423982 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
MSH5-206ENST00000423982 IGLV5-52A0A0A0MRZ9 124 aa8.57□□□□□ -1.04
MSH5-206ENST00000423982 PKD1P98161 4303 aa8.57□□□□□ -1.04
MSH5-206ENST00000423982 HRES1P13985 223 aa8.55□□□□□ -1.04
MSH5-206ENST00000423982 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
MSH5-206ENST00000423982 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
MSH5-206ENST00000423982 SPINK7P58062 85 aa8.52□□□□□ -1.05
MSH5-206ENST00000423982 MRPL34Q9BQ48 92 aaKnown RBP8.5□□□□□ -1.05
MSH5-206ENST00000423982 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
MSH5-206ENST00000423982 ATP11AUNQ6ZP68 121 aa8.5□□□□□ -1.05
MSH5-206ENST00000423982 SPACA4Q8TDM5 124 aa8.5□□□□□ -1.05
MSH5-206ENST00000423982 LINC01558Q9Y6Z2 57 aa8.5□□□□□ -1.05
MSH5-206ENST00000423982 PLAC8Q9NZF1 115 aa8.49□□□□□ -1.05
MSH5-206ENST00000423982 Q5W150 140 aa8.49□□□□□ -1.05
MSH5-206ENST00000423982 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
MSH5-206ENST00000423982 PRR26Q8N8Z3 221 aa8.48□□□□□ -1.05
MSH5-206ENST00000423982 A6NN06 94 aa8.48□□□□□ -1.05
MSH5-206ENST00000423982 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
MSH5-206ENST00000423982 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
MSH5-206ENST00000423982 LINC00483Q53H64 154 aa8.47□□□□□ -1.05
MSH5-206ENST00000423982 PSORS1C2Q9UIG4 136 aa8.47□□□□□ -1.05
MSH5-206ENST00000423982 LRP1BQ9NZR2 4599 aa8.44□□□□□ -1.06
MSH5-206ENST00000423982 KRTAP10-1P60331 282 aa8.44□□□□□ -1.06
MSH5-206ENST00000423982 RBM12B-AS1Q9P1G2 102 aa8.43□□□□□ -1.06
MSH5-206ENST00000423982 DYNC1H1Q14204 4646 aaKnown RBP8.4□□□□□ -1.06
MSH5-206ENST00000423982 RETNLBQ9BQ08 111 aa8.38□□□□□ -1.07
MSH5-206ENST00000423982 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
MSH5-206ENST00000423982 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
MSH5-206ENST00000423982 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
MSH5-206ENST00000423982 ZNF861PO60384 105 aa8.37□□□□□ -1.07
MSH5-206ENST00000423982 A0A1B0GVY2 172 aa8.32□□□□□ -1.08
MSH5-206ENST00000423982 FAT1Q14517 4588 aa8.31□□□□□ -1.08
MSH5-206ENST00000423982 C7orf65Q6ZTY9 151 aa8.31□□□□□ -1.08
MSH5-206ENST00000423982 EPPK1P58107 5090 aaKnown RBP8.3□□□□□ -1.08
MSH5-206ENST00000423982 VPS13BQ7Z7G8 4022 aa8.29□□□□□ -1.08
MSH5-206ENST00000423982 Q6ZSA8 131 aa8.28□□□□□ -1.08
MSH5-206ENST00000423982 APOBP04114 4563 aaKnown RBP8.28□□□□□ -1.08
MSH5-206ENST00000423982 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
MSH5-206ENST00000423982 ACYP2P14621 99 aa8.27□□□□□ -1.09
MSH5-206ENST00000423982 PRAC1Q96KF2 57 aa8.25□□□□□ -1.09
MSH5-206ENST00000423982 IGLV7-43P04211 117 aa8.25□□□□□ -1.09
MSH5-206ENST00000423982 ADM2Q7Z4H4 148 aa8.24□□□□□ -1.09
MSH5-206ENST00000423982 DMAC1Q96GE9 116 aa8.23□□□□□ -1.09
MSH5-206ENST00000423982 LINC00313P59037 77 aa8.21□□□□□ -1.09
MSH5-206ENST00000423982 KIAA1109Q2LD37 5005 aa8.19□□□□□ -1.1
MSH5-206ENST00000423982 A0A1B0GU69 56 aa8.18□□□□□ -1.1
MSH5-206ENST00000423982 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
MSH5-206ENST00000423982 IGKV2-30P06310 120 aa8.16□□□□□ -1.1
MSH5-206ENST00000423982 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
MSH5-206ENST00000423982 HSPG2P98160 4391 aa8.15□□□□□ -1.11
MSH5-206ENST00000423982 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
MSH5-206ENST00000423982 IGKV2D-30A0A075B6S6 120 aa8.13□□□□□ -1.11
MSH5-206ENST00000423982 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
MSH5-206ENST00000423982 KRTAP16-1A8MUX0 517 aa8.1□□□□□ -1.11
MSH5-206ENST00000423982 SPATA8Q6RVD6 105 aa8.08□□□□□ -1.12
MSH5-206ENST00000423982 RYR1P21817 5038 aa8.07□□□□□ -1.12
MSH5-206ENST00000423982 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
MSH5-206ENST00000423982 SPINK1P00995 79 aa8.04□□□□□ -1.12
MSH5-206ENST00000423982 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
MSH5-206ENST00000423982 UQCR11O14957 56 aa8.03□□□□□ -1.12
MSH5-206ENST00000423982 FLG2Q5D862 2391 aaPredicted RBP8.02□□□□□ -1.13
MSH5-206ENST00000423982 KRTAP17-1Q9BYP8 105 aa8.01□□□□□ -1.13
MSH5-206ENST00000423982 Q8N1X5 172 aa8□□□□□ -1.13
MSH5-206ENST00000423982 Q5VSD8 79 aa7.99□□□□□ -1.13
MSH5-206ENST00000423982 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
MSH5-206ENST00000423982 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
MSH5-206ENST00000423982 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
MSH5-206ENST00000423982 KRTAP10-4P60372 401 aaPredicted RBP7.97□□□□□ -1.13
MSH5-206ENST00000423982 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
MSH5-206ENST00000423982 CSAG1Q6PB30 78 aa7.92□□□□□ -1.14
MSH5-206ENST00000423982 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
MSH5-206ENST00000423982 C4orf48Q5BLP8 95 aa7.87□□□□□ -1.15
MSH5-206ENST00000423982 TYMSOSQ8TAI1 123 aa7.86□□□□□ -1.15
MSH5-206ENST00000423982 KRTAP4-5Q9BYR2 181 aa7.85□□□□□ -1.15
MSH5-206ENST00000423982 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
MSH5-206ENST00000423982 ABCA13Q86UQ4 5058 aa7.81□□□□□ -1.16
MSH5-206ENST00000423982 H0YAA0 97 aa7.8□□□□□ -1.16
MSH5-206ENST00000423982 DMBT1Q9UGM3 2413 aaPredicted RBP7.79□□□□□ -1.16
MSH5-206ENST00000423982 C9orf92A6NGG3 77 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms