RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 PDZD2O15018 2839 aa6.36□□□□□ -1.39
PTCH1-206ENST00000421141 SPINK7P58062 85 aa6.35□□□□□ -1.39
PTCH1-206ENST00000421141 A0A087X002 238 aa6.35□□□□□ -1.39
PTCH1-206ENST00000421141 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
PTCH1-206ENST00000421141 A0A0D9SG42 100 aa6.34□□□□□ -1.39
PTCH1-206ENST00000421141 MMP24-AS1A0A0U1RRL7 71 aa6.34□□□□□ -1.39
PTCH1-206ENST00000421141 TENM3Q9P273 2699 aa6.34□□□□□ -1.39
PTCH1-206ENST00000421141 OCR1Q9BZK8 76 aa6.34□□□□□ -1.39
PTCH1-206ENST00000421141 PKD1L1Q8TDX9 2849 aa6.33□□□□□ -1.4
PTCH1-206ENST00000421141 RPS29P62273 56 aaKnown RBP6.33□□□□□ -1.4
PTCH1-206ENST00000421141 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
PTCH1-206ENST00000421141 H7BZZ5 65 aa6.31□□□□□ -1.4
PTCH1-206ENST00000421141 CAMK2N1Q7Z7J9 78 aa6.3□□□□□ -1.4
PTCH1-206ENST00000421141 Q5W150 140 aa6.29□□□□□ -1.4
PTCH1-206ENST00000421141 SVEP1Q4LDE5 3571 aa6.29□□□□□ -1.4
PTCH1-206ENST00000421141 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
PTCH1-206ENST00000421141 TGP01266 2768 aa6.25□□□□□ -1.41
PTCH1-206ENST00000421141 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
PTCH1-206ENST00000421141 ASB16-AS1Q495Z4 193 aa6.23□□□□□ -1.41
PTCH1-206ENST00000421141 R4GN34 69 aa6.23□□□□□ -1.41
PTCH1-206ENST00000421141 VWFP04275 2813 aa6.23□□□□□ -1.41
PTCH1-206ENST00000421141 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
PTCH1-206ENST00000421141 A0A1B0GU33 70 aa6.22□□□□□ -1.41
PTCH1-206ENST00000421141 VPS13CQ709C8 3753 aa6.21□□□□□ -1.41
PTCH1-206ENST00000421141 Q8N9P0 234 aaPredicted RBP6.21□□□□□ -1.42
PTCH1-206ENST00000421141 LUZP6Q538Z0 58 aa6.19□□□□□ -1.42
PTCH1-206ENST00000421141 KRTAP11-1Q8IUC1 163 aa6.19□□□□□ -1.42
PTCH1-206ENST00000421141 OTOGQ6ZRI0 2925 aa6.19□□□□□ -1.42
PTCH1-206ENST00000421141 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
PTCH1-206ENST00000421141 Q75L30 129 aa6.17□□□□□ -1.42
PTCH1-206ENST00000421141 TENM2Q9NT68 2774 aa6.16□□□□□ -1.42
PTCH1-206ENST00000421141 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
PTCH1-206ENST00000421141 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
PTCH1-206ENST00000421141 Q5XG85 94 aa6.15□□□□□ -1.42
PTCH1-206ENST00000421141 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
PTCH1-206ENST00000421141 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
PTCH1-206ENST00000421141 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
PTCH1-206ENST00000421141 KRTAP7-1Q8IUC3 87 aa6.11□□□□□ -1.43
PTCH1-206ENST00000421141 PLAC4Q8WY50 150 aa6.11□□□□□ -1.43
PTCH1-206ENST00000421141 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
PTCH1-206ENST00000421141 Q1T7F1 81 aa6.09□□□□□ -1.43
PTCH1-206ENST00000421141 M0QZ58 72 aa6.07□□□□□ -1.44
PTCH1-206ENST00000421141 LCA10Q71F78 164 aa6.07□□□□□ -1.44
PTCH1-206ENST00000421141 RPL37P61927 97 aaKnown RBP6.07□□□□□ -1.44
PTCH1-206ENST00000421141 ZNF469Q96JG9 3925 aaPredicted RBP6.07□□□□□ -1.44
PTCH1-206ENST00000421141 COL7A1Q02388 2944 aa6.06□□□□□ -1.44
PTCH1-206ENST00000421141 ADM2Q7Z4H4 148 aa6.05□□□□□ -1.44
PTCH1-206ENST00000421141 CUBNO60494 3623 aa6.05□□□□□ -1.44
PTCH1-206ENST00000421141 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
PTCH1-206ENST00000421141 KRTAP29-1A8MX34 341 aaPredicted RBP5.99□□□□□ -1.45
PTCH1-206ENST00000421141 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
PTCH1-206ENST00000421141 LINC01558Q9Y6Z2 57 aa5.98□□□□□ -1.45
PTCH1-206ENST00000421141 ANK3Q12955 4377 aaKnown RBP5.98□□□□□ -1.45
PTCH1-206ENST00000421141 KTN1-AS1Q86SY8 53 aa5.96□□□□□ -1.46
PTCH1-206ENST00000421141 A8MUU9 505 aa5.93□□□□□ -1.46
PTCH1-206ENST00000421141 H3BS24 57 aa5.93□□□□□ -1.46
PTCH1-206ENST00000421141 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
PTCH1-206ENST00000421141 KRTAP1-4P0C5Y4 121 aa5.91□□□□□ -1.46
PTCH1-206ENST00000421141 A0A1B0GVY2 172 aa5.9□□□□□ -1.46
PTCH1-206ENST00000421141 XP32Q5T750 250 aa5.87□□□□□ -1.47
PTCH1-206ENST00000421141 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
PTCH1-206ENST00000421141 CYSTM1Q9H1C7 97 aa5.81□□□□□ -1.48
PTCH1-206ENST00000421141 ROMO1P60602 79 aa5.8□□□□□ -1.48
PTCH1-206ENST00000421141 Q5VV11 94 aa5.8□□□□□ -1.48
PTCH1-206ENST00000421141 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
PTCH1-206ENST00000421141 SRRM2Q9UQ35 2752 aaKnown RBP5.78□□□□□ -1.48
PTCH1-206ENST00000421141 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
PTCH1-206ENST00000421141 KRTAP10-8P60410 259 aa5.71□□□□□ -1.49
PTCH1-206ENST00000421141 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
PTCH1-206ENST00000421141 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
PTCH1-206ENST00000421141 MEGF8Q7Z7M0 2845 aa5.66□□□□□ -1.5
PTCH1-206ENST00000421141 KRTAP10-10P60014 251 aa5.65□□□□□ -1.51
PTCH1-206ENST00000421141 CSMD3Q7Z407 3707 aa5.64□□□□□ -1.51
PTCH1-206ENST00000421141 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
PTCH1-206ENST00000421141 HUWE1Q7Z6Z7 4374 aaKnown RBP5.62□□□□□ -1.51
PTCH1-206ENST00000421141 TNP1P09430 55 aa5.61□□□□□ -1.51
PTCH1-206ENST00000421141 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
PTCH1-206ENST00000421141 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
PTCH1-206ENST00000421141 A8MU10 97 aa5.56□□□□□ -1.52
PTCH1-206ENST00000421141 CMYA5Q8N3K9 4069 aa5.52□□□□□ -1.53
PTCH1-206ENST00000421141 ANK2Q01484 3957 aa5.48□□□□□ -1.53
PTCH1-206ENST00000421141 DNAH1Q9P2D7 4330 aa5.38□□□□□ -1.55
PTCH1-206ENST00000421141 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
PTCH1-206ENST00000421141 KMT2AQ03164 3969 aa5.37□□□□□ -1.55
PTCH1-206ENST00000421141 DNAH3Q8TD57 4116 aa5.37□□□□□ -1.55
PTCH1-206ENST00000421141 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
PTCH1-206ENST00000421141 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
PTCH1-206ENST00000421141 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
PTCH1-206ENST00000421141 PRKDCP78527 4128 aaKnown RBP5.32□□□□□ -1.56
PTCH1-206ENST00000421141 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
PTCH1-206ENST00000421141 P0C880 135 aa5.29□□□□□ -1.56
PTCH1-206ENST00000421141 LYSTQ99698 3801 aa5.28□□□□□ -1.56
PTCH1-206ENST00000421141 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
PTCH1-206ENST00000421141 H0YAA0 97 aa5.27□□□□□ -1.57
PTCH1-206ENST00000421141 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
PTCH1-206ENST00000421141 A6NN06 94 aa5.24□□□□□ -1.57
PTCH1-206ENST00000421141 KRTAP4-5Q9BYR2 181 aa5.23□□□□□ -1.57
PTCH1-206ENST00000421141 DNAH6Q9C0G6 4158 aa5.2□□□□□ -1.58
PTCH1-206ENST00000421141 HECTD4Q9Y4D8 3996 aa5.18□□□□□ -1.58
PTCH1-206ENST00000421141 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms