RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
SBNO1-202ENST00000420886 EYSQ5T1H1 3165 aa3.81□□□□□ -1.8
SBNO1-202ENST00000420886 MAST4O15021 2626 aa3.81□□□□□ -1.8
SBNO1-202ENST00000420886 WWC2-AS2Q96NR7 200 aa3.81□□□□□ -1.8
SBNO1-202ENST00000420886 KRTAP11-1Q8IUC1 163 aa3.8□□□□□ -1.8
SBNO1-202ENST00000420886 STAB2Q8WWQ8 2551 aa3.8□□□□□ -1.8
SBNO1-202ENST00000420886 A0A087WTM6 91 aa3.8□□□□□ -1.8
SBNO1-202ENST00000420886 CRYBG3Q68DQ2 2970 aa3.79□□□□□ -1.8
SBNO1-202ENST00000420886 KRTAP10-11P60412 298 aa3.78□□□□□ -1.8
SBNO1-202ENST00000420886 S4R3F8 94 aa3.78□□□□□ -1.8
SBNO1-202ENST00000420886 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
SBNO1-202ENST00000420886 SRRM2Q9UQ35 2752 aaKnown RBP3.77□□□□□ -1.81
SBNO1-202ENST00000420886 KRTAP10-3P60369 221 aa3.76□□□□□ -1.81
SBNO1-202ENST00000420886 FBN2P35556 2912 aa3.75□□□□□ -1.81
SBNO1-202ENST00000420886 STAB1Q9NY15 2570 aa3.75□□□□□ -1.81
SBNO1-202ENST00000420886 NF1P21359 2839 aa3.74□□□□□ -1.81
SBNO1-202ENST00000420886 FLNBO75369 2602 aaKnown RBP3.74□□□□□ -1.81
SBNO1-202ENST00000420886 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.74□□□□□ -1.81
SBNO1-202ENST00000420886 DCHS2Q6V1P9 2916 aa3.73□□□□□ -1.81
SBNO1-202ENST00000420886 ZANQ9Y493 2812 aa3.73□□□□□ -1.81
SBNO1-202ENST00000420886 CELSR2Q9HCU4 2923 aa3.71□□□□□ -1.81
SBNO1-202ENST00000420886 MXRA5Q9NR99 2828 aa3.7□□□□□ -1.82
SBNO1-202ENST00000420886 H0YAA0 97 aa3.7□□□□□ -1.82
SBNO1-202ENST00000420886 AKAP9Q99996 3911 aa3.7□□□□□ -1.82
SBNO1-202ENST00000420886 TGP01266 2768 aa3.69□□□□□ -1.82
SBNO1-202ENST00000420886 MUC3AQ02505 3323 aa3.69□□□□□ -1.82
SBNO1-202ENST00000420886 FLNCQ14315 2725 aa3.69□□□□□ -1.82
SBNO1-202ENST00000420886 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
SBNO1-202ENST00000420886 VPS13CQ709C8 3753 aa3.68□□□□□ -1.82
SBNO1-202ENST00000420886 CELSR1Q9NYQ6 3014 aa3.68□□□□□ -1.82
SBNO1-202ENST00000420886 Q6ZSA8 131 aa3.68□□□□□ -1.82
SBNO1-202ENST00000420886 HIVEP1P15822 2718 aa3.68□□□□□ -1.82
SBNO1-202ENST00000420886 IGSF10Q6WRI0 2623 aa3.67□□□□□ -1.82
SBNO1-202ENST00000420886 NBPF19A0A087WUL8 3843 aa3.67□□□□□ -1.82
SBNO1-202ENST00000420886 PDZD2O15018 2839 aa3.67□□□□□ -1.82
SBNO1-202ENST00000420886 R4GN34 69 aa3.67□□□□□ -1.82
SBNO1-202ENST00000420886 KRTAP7-1Q8IUC3 87 aa3.66□□□□□ -1.82
SBNO1-202ENST00000420886 KRTAP1-3Q8IUG1 177 aa3.66□□□□□ -1.82
SBNO1-202ENST00000420886 M0QZ58 72 aa3.65□□□□□ -1.82
SBNO1-202ENST00000420886 TENM2Q9NT68 2774 aa3.65□□□□□ -1.82
SBNO1-202ENST00000420886 NIPBLQ6KC79 2804 aaeCLIP3.65□□□□□ -1.83
SBNO1-202ENST00000420886 KRTAP13-1Q8IUC0 172 aa3.64□□□□□ -1.83
SBNO1-202ENST00000420886 KRTAP24-1Q3LI83 254 aa3.64□□□□□ -1.83
SBNO1-202ENST00000420886 CUBNO60494 3623 aa3.64□□□□□ -1.83
SBNO1-202ENST00000420886 CSMD2Q7Z408 3487 aa3.64□□□□□ -1.83
SBNO1-202ENST00000420886 BSNQ9UPA5 3926 aa3.62□□□□□ -1.83
SBNO1-202ENST00000420886 KRTAP1-1Q07627 177 aa3.61□□□□□ -1.83
SBNO1-202ENST00000420886 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
SBNO1-202ENST00000420886 RPS29P62273 56 aaKnown RBP3.61□□□□□ -1.83
SBNO1-202ENST00000420886 P0C880 135 aa3.6□□□□□ -1.83
SBNO1-202ENST00000420886 PP632Q6XCG6 107 aa3.58□□□□□ -1.84
SBNO1-202ENST00000420886 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
SBNO1-202ENST00000420886 ALMS1Q8TCU4 4167 aa3.55□□□□□ -1.84
SBNO1-202ENST00000420886 KRTAP13-3Q3SY46 172 aa3.54□□□□□ -1.84
SBNO1-202ENST00000420886 FBN1P35555 2871 aaKnown RBP3.5□□□□□ -1.85
SBNO1-202ENST00000420886 SMR3BP02814 79 aaPredicted RBP3.49□□□□□ -1.85
SBNO1-202ENST00000420886 PKD1L1Q8TDX9 2849 aa3.47□□□□□ -1.85
SBNO1-202ENST00000420886 VWFP04275 2813 aa3.47□□□□□ -1.85
SBNO1-202ENST00000420886 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
SBNO1-202ENST00000420886 KRTAP13-2Q52LG2 175 aa3.46□□□□□ -1.86
SBNO1-202ENST00000420886 Q6ZRN7 208 aaPredicted RBP3.45□□□□□ -1.86
SBNO1-202ENST00000420886 COL7A1Q02388 2944 aa3.45□□□□□ -1.86
SBNO1-202ENST00000420886 TENM3Q9P273 2699 aa3.44□□□□□ -1.86
SBNO1-202ENST00000420886 TNP1P09430 55 aa3.42□□□□□ -1.86
SBNO1-202ENST00000420886 TPRXLQ17RH7 258 aa3.42□□□□□ -1.86
SBNO1-202ENST00000420886 TRRAPQ9Y4A5 3859 aa3.41□□□□□ -1.86
SBNO1-202ENST00000420886 TENM4Q6N022 2769 aa3.41□□□□□ -1.86
SBNO1-202ENST00000420886 TENM1Q9UKZ4 2725 aa3.38□□□□□ -1.87
SBNO1-202ENST00000420886 KRTAP10-1P60331 282 aa3.38□□□□□ -1.87
SBNO1-202ENST00000420886 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
SBNO1-202ENST00000420886 CSMD3Q7Z407 3707 aa3.36□□□□□ -1.87
SBNO1-202ENST00000420886 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
SBNO1-202ENST00000420886 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
SBNO1-202ENST00000420886 OTOGQ6ZRI0 2925 aa3.34□□□□□ -1.87
SBNO1-202ENST00000420886 J3QL48 77 aa3.32□□□□□ -1.88
SBNO1-202ENST00000420886 MEGF8Q7Z7M0 2845 aa3.32□□□□□ -1.88
SBNO1-202ENST00000420886 INE1O15225 51 aa3.31□□□□□ -1.88
SBNO1-202ENST00000420886 KRTAP12-1P59990 96 aa3.29□□□□□ -1.88
SBNO1-202ENST00000420886 KRTAP1-4P0C5Y4 121 aa3.28□□□□□ -1.88
SBNO1-202ENST00000420886 ZNF469Q96JG9 3925 aaPredicted RBP3.28□□□□□ -1.89
SBNO1-202ENST00000420886 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
SBNO1-202ENST00000420886 M0R2T5 61 aa3.24□□□□□ -1.89
SBNO1-202ENST00000420886 XP32Q5T750 250 aa3.24□□□□□ -1.89
SBNO1-202ENST00000420886 PRO2289Q9P1D8 64 aa3.24□□□□□ -1.89
SBNO1-202ENST00000420886 FBN3Q75N90 2809 aa3.23□□□□□ -1.89
SBNO1-202ENST00000420886 Q5VSD8 79 aa3.22□□□□□ -1.89
SBNO1-202ENST00000420886 LYSTQ99698 3801 aa3.21□□□□□ -1.9
SBNO1-202ENST00000420886 KRTAP3-1Q9BYR8 98 aa3.2□□□□□ -1.9
SBNO1-202ENST00000420886 KRTAP10-6P60371 365 aaPredicted RBP3.2□□□□□ -1.9
SBNO1-202ENST00000420886 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
SBNO1-202ENST00000420886 CMYA5Q8N3K9 4069 aa3.16□□□□□ -1.9
SBNO1-202ENST00000420886 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
SBNO1-202ENST00000420886 ANK2Q01484 3957 aa3.1□□□□□ -1.91
SBNO1-202ENST00000420886 DNAH3Q8TD57 4116 aa3.08□□□□□ -1.92
SBNO1-202ENST00000420886 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
SBNO1-202ENST00000420886 KRTAP23-1A1A580 65 aa3.05□□□□□ -1.92
SBNO1-202ENST00000420886 KRTAP3-3Q9BYR6 98 aa3.04□□□□□ -1.92
SBNO1-202ENST00000420886 DNAH7Q8WXX0 4024 aa3.01□□□□□ -1.93
SBNO1-202ENST00000420886 VPS13BQ7Z7G8 4022 aa2.95□□□□□ -1.94
SBNO1-202ENST00000420886 KRTAP19-4Q3LI73 84 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms