RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 SPINK6Q6UWN8 80 aa12.04□□□□□ -0.48
FAM3A-208ENST00000419205 LRP1BQ9NZR2 4599 aa12.03□□□□□ -0.48
FAM3A-208ENST00000419205 KMT2CQ8NEZ4 4911 aaKnown RBP12.02□□□□□ -0.48
FAM3A-208ENST00000419205 SMIM26A0A096LP01 95 aa12.02□□□□□ -0.49
FAM3A-208ENST00000419205 NOTCH2NLQ7Z3S9 236 aa12.02□□□□□ -0.49
FAM3A-208ENST00000419205 C1orf64Q8NEQ6 169 aa12.02□□□□□ -0.49
FAM3A-208ENST00000419205 CYP4F30PQ9H0H9 118 aa12.01□□□□□ -0.49
FAM3A-208ENST00000419205 C8orf87E5RJ46 101 aa11.97□□□□□ -0.49
FAM3A-208ENST00000419205 SPANXA2-OT1Q8N9U9 137 aa11.97□□□□□ -0.49
FAM3A-208ENST00000419205 NDUFS5O43920 106 aa11.96□□□□□ -0.49
FAM3A-208ENST00000419205 SACSQ9NZJ4 4579 aa11.95□□□□□ -0.5
FAM3A-208ENST00000419205 A0A1B0GVY2 172 aa11.95□□□□□ -0.5
FAM3A-208ENST00000419205 PLA2G1BP04054 148 aaKnown RBP11.93□□□□□ -0.5
FAM3A-208ENST00000419205 C1orf195Q5TG92 126 aa11.93□□□□□ -0.5
FAM3A-208ENST00000419205 FP248Q71RG6 208 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-208ENST00000419205 LIMD2Q9BT23 127 aa11.93□□□□□ -0.5
FAM3A-208ENST00000419205 VPS13BQ7Z7G8 4022 aa11.9□□□□□ -0.5
FAM3A-208ENST00000419205 C4orf26Q17RF5 130 aa11.89□□□□□ -0.51
FAM3A-208ENST00000419205 PRR4Q16378 134 aa11.88□□□□□ -0.51
FAM3A-208ENST00000419205 TYMSOSQ8TAI1 123 aa11.88□□□□□ -0.51
FAM3A-208ENST00000419205 LINC00313P59037 77 aa11.85□□□□□ -0.51
FAM3A-208ENST00000419205 RYR3Q15413 4870 aa11.85□□□□□ -0.51
FAM3A-208ENST00000419205 RYR2Q92736 4967 aa11.85□□□□□ -0.51
FAM3A-208ENST00000419205 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
FAM3A-208ENST00000419205 PKHD1P08F94 4074 aa11.84□□□□□ -0.51
FAM3A-208ENST00000419205 SPINK1P00995 79 aa11.83□□□□□ -0.52
FAM3A-208ENST00000419205 KRTAP13-3Q3SY46 172 aa11.82□□□□□ -0.52
FAM3A-208ENST00000419205 IGLV7-46A0A075B6I9 117 aa11.81□□□□□ -0.52
FAM3A-208ENST00000419205 SMR3BP02814 79 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-208ENST00000419205 Q5W150 140 aa11.78□□□□□ -0.52
FAM3A-208ENST00000419205 Q8N9P0 234 aaPredicted RBP11.78□□□□□ -0.52
FAM3A-208ENST00000419205 LOC101927531A0A1B0GV80 90 aa11.77□□□□□ -0.52
FAM3A-208ENST00000419205 PCOTHQ58A44 107 aa11.77□□□□□ -0.52
FAM3A-208ENST00000419205 RPS29P62273 56 aaKnown RBP11.77□□□□□ -0.53
FAM3A-208ENST00000419205 PRR26Q8N8Z3 221 aa11.76□□□□□ -0.53
FAM3A-208ENST00000419205 KRTAP10-4P60372 401 aaPredicted RBP11.75□□□□□ -0.53
FAM3A-208ENST00000419205 DYNC1H1Q14204 4646 aaKnown RBP11.75□□□□□ -0.53
FAM3A-208ENST00000419205 KRTAP16-1A8MUX0 517 aa11.74□□□□□ -0.53
FAM3A-208ENST00000419205 LINC00304Q8N9R0 145 aa11.74□□□□□ -0.53
FAM3A-208ENST00000419205 SPAG11AQ6PDA7 123 aa11.73□□□□□ -0.53
FAM3A-208ENST00000419205 MPLKIPQ8TAP9 179 aa11.72□□□□□ -0.53
FAM3A-208ENST00000419205 FAM229AH3BQW9 127 aa11.71□□□□□ -0.54
FAM3A-208ENST00000419205 SVIPQ8NHG7 77 aa11.69□□□□□ -0.54
FAM3A-208ENST00000419205 Q1T7F1 81 aa11.67□□□□□ -0.54
FAM3A-208ENST00000419205 APOBP04114 4563 aaKnown RBP11.62□□□□□ -0.55
FAM3A-208ENST00000419205 COA5Q86WW8 74 aa11.62□□□□□ -0.55
FAM3A-208ENST00000419205 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
FAM3A-208ENST00000419205 V9GYY9 64 aa11.56□□□□□ -0.56
FAM3A-208ENST00000419205 RETNLBQ9BQ08 111 aa11.54□□□□□ -0.56
FAM3A-208ENST00000419205 HRES1P13985 223 aa11.51□□□□□ -0.57
FAM3A-208ENST00000419205 PKHD1L1Q86WI1 4243 aa11.47□□□□□ -0.57
FAM3A-208ENST00000419205 FAT1Q14517 4588 aa11.47□□□□□ -0.57
FAM3A-208ENST00000419205 DMAC1Q96GE9 116 aa11.44□□□□□ -0.58
FAM3A-208ENST00000419205 EPPK1P58107 5090 aaKnown RBP11.42□□□□□ -0.58
FAM3A-208ENST00000419205 PSPHP1O15172 72 aa11.42□□□□□ -0.58
FAM3A-208ENST00000419205 ACYP2P14621 99 aa11.41□□□□□ -0.58
FAM3A-208ENST00000419205 IGKV2D-30A0A075B6S6 120 aa11.39□□□□□ -0.59
FAM3A-208ENST00000419205 A8MUN3 132 aa11.39□□□□□ -0.59
FAM3A-208ENST00000419205 PRO0628Q9UI54 55 aa11.38□□□□□ -0.59
FAM3A-208ENST00000419205 C20orf166-AS1Q96NR2 134 aa11.36□□□□□ -0.59
FAM3A-208ENST00000419205 A8MUU9 505 aa11.34□□□□□ -0.59
FAM3A-208ENST00000419205 Q5VSD8 79 aa11.34□□□□□ -0.59
FAM3A-208ENST00000419205 BRK1Q8WUW1 75 aa11.34□□□□□ -0.59
FAM3A-208ENST00000419205 Q5VV11 94 aa11.33□□□□□ -0.59
FAM3A-208ENST00000419205 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
FAM3A-208ENST00000419205 C9orf92A6NGG3 77 aa11.31□□□□□ -0.6
FAM3A-208ENST00000419205 C7orf65Q6ZTY9 151 aa11.31□□□□□ -0.6
FAM3A-208ENST00000419205 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
FAM3A-208ENST00000419205 PRR15LQ9BU68 103 aa11.31□□□□□ -0.6
FAM3A-208ENST00000419205 Q8N1X5 172 aa11.28□□□□□ -0.6
FAM3A-208ENST00000419205 BIRC6Q9NR09 4857 aa11.26□□□□□ -0.61
FAM3A-208ENST00000419205 FLG2Q5D862 2391 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-208ENST00000419205 Q75L30 129 aa11.25□□□□□ -0.61
FAM3A-208ENST00000419205 CHKB-CPT1BH3BT56 60 aa11.24□□□□□ -0.61
FAM3A-208ENST00000419205 HSPG2P98160 4391 aa11.21□□□□□ -0.61
FAM3A-208ENST00000419205 KRTAP17-1Q9BYP8 105 aa11.14□□□□□ -0.63
FAM3A-208ENST00000419205 RYR1P21817 5038 aa11.13□□□□□ -0.63
FAM3A-208ENST00000419205 TNXBP22105 4242 aa11.13□□□□□ -0.63
FAM3A-208ENST00000419205 KIAA1109Q2LD37 5005 aa11.08□□□□□ -0.64
FAM3A-208ENST00000419205 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
FAM3A-208ENST00000419205 A6NED7 52 aa11.05□□□□□ -0.64
FAM3A-208ENST00000419205 SPINK7P58062 85 aa11.05□□□□□ -0.64
FAM3A-208ENST00000419205 FAT3Q8TDW7 4589 aa11.04□□□□□ -0.64
FAM3A-208ENST00000419205 MT1HL1P0DM35 61 aa11.01□□□□□ -0.65
FAM3A-208ENST00000419205 HERC2O95714 4834 aa10.98□□□□□ -0.65
FAM3A-208ENST00000419205 A8MU10 97 aa10.98□□□□□ -0.65
FAM3A-208ENST00000419205 LCA10Q71F78 164 aa10.98□□□□□ -0.65
FAM3A-208ENST00000419205 A0A1B0GU69 56 aa10.96□□□□□ -0.65
FAM3A-208ENST00000419205 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.65
FAM3A-208ENST00000419205 RPL37P61927 97 aaKnown RBP10.94□□□□□ -0.66
FAM3A-208ENST00000419205 ATP11AUNQ6ZP68 121 aa10.94□□□□□ -0.66
FAM3A-208ENST00000419205 KRTAP3-1Q9BYR8 98 aa10.93□□□□□ -0.66
FAM3A-208ENST00000419205 XP32Q5T750 250 aa10.91□□□□□ -0.66
FAM3A-208ENST00000419205 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.67
FAM3A-208ENST00000419205 DMBT1Q9UGM3 2413 aaPredicted RBP10.88□□□□□ -0.67
FAM3A-208ENST00000419205 COX6B2Q6YFQ2 88 aa10.86□□□□□ -0.67
FAM3A-208ENST00000419205 MYCBP2O75592 4640 aa10.75□□□□□ -0.69
FAM3A-208ENST00000419205 KRTAP4-5Q9BYR2 181 aa10.74□□□□□ -0.69
FAM3A-208ENST00000419205 SEC61GP60059 68 aa10.73□□□□□ -0.69
FAM3A-208ENST00000419205 UQCR11O14957 56 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms