RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
CHMP5-202ENST00000419016 PRR15Q8IV56 129 aa7.79□□□□□ -1.16
CHMP5-202ENST00000419016 A0A087WVE0 104 aa7.78□□□□□ -1.16
CHMP5-202ENST00000419016 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
CHMP5-202ENST00000419016 A0A1B0GVX0 72 aa7.74□□□□□ -1.17
CHMP5-202ENST00000419016 NDUFB1O75438 58 aa7.74□□□□□ -1.17
CHMP5-202ENST00000419016 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
CHMP5-202ENST00000419016 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
CHMP5-202ENST00000419016 IGHV6-1A0A0B4J1U7 121 aa7.7□□□□□ -1.18
CHMP5-202ENST00000419016 MMP24-AS1A0A0U1RRL7 71 aa7.7□□□□□ -1.18
CHMP5-202ENST00000419016 SCGB1A1P11684 91 aa7.69□□□□□ -1.18
CHMP5-202ENST00000419016 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
CHMP5-202ENST00000419016 FAM236AA0A1B0GUQ0 79 aa7.68□□□□□ -1.18
CHMP5-202ENST00000419016 FAM236BA0A1B0GV22 79 aa7.68□□□□□ -1.18
CHMP5-202ENST00000419016 HCG22E2RYF7 251 aa7.68□□□□□ -1.18
CHMP5-202ENST00000419016 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
CHMP5-202ENST00000419016 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
CHMP5-202ENST00000419016 PCLOQ9Y6V0 5065 aa7.64□□□□□ -1.19
CHMP5-202ENST00000419016 LINC00313P59037 77 aa7.64□□□□□ -1.19
CHMP5-202ENST00000419016 CASC2Q6XLA1 102 aa7.64□□□□□ -1.19
CHMP5-202ENST00000419016 WFDC13Q8IUB5 93 aa7.64□□□□□ -1.19
CHMP5-202ENST00000419016 hDV103S1A0JD37 113 aa7.63□□□□□ -1.19
CHMP5-202ENST00000419016 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
CHMP5-202ENST00000419016 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
CHMP5-202ENST00000419016 ATOX1O00244 68 aa7.59□□□□□ -1.2
CHMP5-202ENST00000419016 MRPL34Q9BQ48 92 aaKnown RBP7.59□□□□□ -1.2
CHMP5-202ENST00000419016 IGLV7-46A0A075B6I9 117 aa7.57□□□□□ -1.2
CHMP5-202ENST00000419016 OCR1Q9BZK8 76 aa7.57□□□□□ -1.2
CHMP5-202ENST00000419016 Q8N9P0 234 aaPredicted RBP7.56□□□□□ -1.2
CHMP5-202ENST00000419016 C9orf92A6NGG3 77 aa7.54□□□□□ -1.2
CHMP5-202ENST00000419016 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
CHMP5-202ENST00000419016 PRR4Q16378 134 aa7.53□□□□□ -1.2
CHMP5-202ENST00000419016 SMIM20Q8N5G0 67 aa7.52□□□□□ -1.21
CHMP5-202ENST00000419016 TRAV7A0A075B6U4 112 aa7.51□□□□□ -1.21
CHMP5-202ENST00000419016 LCE2BO14633 110 aa7.5□□□□□ -1.21
CHMP5-202ENST00000419016 SERP2Q8N6R1 65 aa7.5□□□□□ -1.21
CHMP5-202ENST00000419016 ANAPC13Q9BS18 74 aa7.5□□□□□ -1.21
CHMP5-202ENST00000419016 C20orf166-AS1Q96NR2 134 aa7.5□□□□□ -1.21
CHMP5-202ENST00000419016 A8MUU9 505 aa7.49□□□□□ -1.21
CHMP5-202ENST00000419016 TPRXLQ17RH7 258 aa7.49□□□□□ -1.21
CHMP5-202ENST00000419016 TP53AIP1Q9HCN2 124 aa7.49□□□□□ -1.21
CHMP5-202ENST00000419016 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
CHMP5-202ENST00000419016 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
CHMP5-202ENST00000419016 UQCRQO14949 82 aa7.47□□□□□ -1.21
CHMP5-202ENST00000419016 NDUFS5O43920 106 aa7.46□□□□□ -1.21
CHMP5-202ENST00000419016 HERC1Q15751 4861 aa7.45□□□□□ -1.22
CHMP5-202ENST00000419016 COX7CP15954 63 aa7.45□□□□□ -1.22
CHMP5-202ENST00000419016 XP32Q5T750 250 aa7.44□□□□□ -1.22
CHMP5-202ENST00000419016 Q75L30 129 aa7.44□□□□□ -1.22
CHMP5-202ENST00000419016 Q5W150 140 aa7.43□□□□□ -1.22
CHMP5-202ENST00000419016 PCP4P48539 62 aa7.42□□□□□ -1.22
CHMP5-202ENST00000419016 LPAP08519 4548 aa7.42□□□□□ -1.22
CHMP5-202ENST00000419016 C5orf47Q569G3 176 aa7.42□□□□□ -1.22
CHMP5-202ENST00000419016 TRAV22A0A0B4J277 110 aa7.4□□□□□ -1.23
CHMP5-202ENST00000419016 RPL37P61927 97 aaKnown RBP7.39□□□□□ -1.23
CHMP5-202ENST00000419016 H0Y9P7 68 aa7.37□□□□□ -1.23
CHMP5-202ENST00000419016 CCDC179H3BU77 68 aa7.37□□□□□ -1.23
CHMP5-202ENST00000419016 ZCCHC13Q8WW36 166 aaKnown RBP7.37□□□□□ -1.23
CHMP5-202ENST00000419016 LRP2P98164 4655 aa7.36□□□□□ -1.23
CHMP5-202ENST00000419016 A0A0U1RQV1 116 aa7.36□□□□□ -1.23
CHMP5-202ENST00000419016 C20orf197Q8N268 126 aa7.35□□□□□ -1.23
CHMP5-202ENST00000419016 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
CHMP5-202ENST00000419016 H3BPC8 53 aa7.34□□□□□ -1.23
CHMP5-202ENST00000419016 MP68P56378 58 aa7.34□□□□□ -1.23
CHMP5-202ENST00000419016 KLKP1Q107X0 134 aa7.33□□□□□ -1.24
CHMP5-202ENST00000419016 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
CHMP5-202ENST00000419016 C1orf64Q8NEQ6 169 aa7.31□□□□□ -1.24
CHMP5-202ENST00000419016 SNURFQ9Y675 71 aa7.31□□□□□ -1.24
CHMP5-202ENST00000419016 CYSTM1Q9H1C7 97 aa7.3□□□□□ -1.24
CHMP5-202ENST00000419016 ATP11AUNQ6ZP68 121 aa7.29□□□□□ -1.24
CHMP5-202ENST00000419016 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
CHMP5-202ENST00000419016 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
CHMP5-202ENST00000419016 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
CHMP5-202ENST00000419016 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
CHMP5-202ENST00000419016 PCOTHQ58A44 107 aa7.24□□□□□ -1.25
CHMP5-202ENST00000419016 H7BZZ5 65 aa7.22□□□□□ -1.25
CHMP5-202ENST00000419016 IGKV2D-30A0A075B6S6 120 aa7.22□□□□□ -1.25
CHMP5-202ENST00000419016 NDUFC1O43677 76 aa7.2□□□□□ -1.26
CHMP5-202ENST00000419016 SPINK7P58062 85 aa7.2□□□□□ -1.26
CHMP5-202ENST00000419016 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
CHMP5-202ENST00000419016 SEC61BP60468 96 aaKnown RBP7.2□□□□□ -1.26
CHMP5-202ENST00000419016 MUC17Q685J3 4493 aa7.18□□□□□ -1.26
CHMP5-202ENST00000419016 LCE2AQ5TA79 106 aaPredicted RBP7.14□□□□□ -1.27
CHMP5-202ENST00000419016 HRES1P13985 223 aa7.13□□□□□ -1.27
CHMP5-202ENST00000419016 KRTAP4-1Q9BYQ7 146 aa7.11□□□□□ -1.27
CHMP5-202ENST00000419016 SPANXA2-OT1Q8N9U9 137 aa7.11□□□□□ -1.27
CHMP5-202ENST00000419016 TMEM258P61165 79 aa7.09□□□□□ -1.27
CHMP5-202ENST00000419016 C4orf26Q17RF5 130 aa7.06□□□□□ -1.28
CHMP5-202ENST00000419016 MPLKIPQ8TAP9 179 aa7.06□□□□□ -1.28
CHMP5-202ENST00000419016 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
CHMP5-202ENST00000419016 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
CHMP5-202ENST00000419016 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
CHMP5-202ENST00000419016 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
CHMP5-202ENST00000419016 KRTAP3-1Q9BYR8 98 aa7.02□□□□□ -1.29
CHMP5-202ENST00000419016 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
CHMP5-202ENST00000419016 ATP5EP56381 51 aaPredicted RBP7.01□□□□□ -1.29
CHMP5-202ENST00000419016 DMAC1Q96GE9 116 aa7.01□□□□□ -1.29
CHMP5-202ENST00000419016 MUC2Q02817 5179 aa7□□□□□ -1.29
CHMP5-202ENST00000419016 COX6B2Q6YFQ2 88 aa7□□□□□ -1.29
CHMP5-202ENST00000419016 H3BS24 57 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms