RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
MDC1-203ENST00000417033 KRTAP4-7Q9BYR0 210 aa4.55□□□□□ -1.68
MDC1-203ENST00000417033 C1orf195Q5TG92 126 aa4.54□□□□□ -1.68
MDC1-203ENST00000417033 Q5XG85 94 aa4.54□□□□□ -1.68
MDC1-203ENST00000417033 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
MDC1-203ENST00000417033 Q96NJ1 140 aa4.53□□□□□ -1.68
MDC1-203ENST00000417033 KRTAP4-9Q9BYQ8 210 aa4.53□□□□□ -1.68
MDC1-203ENST00000417033 PDE6GP18545 87 aa4.52□□□□□ -1.69
MDC1-203ENST00000417033 PRR4Q16378 134 aa4.52□□□□□ -1.69
MDC1-203ENST00000417033 DEFB116Q30KQ4 102 aa4.51□□□□□ -1.69
MDC1-203ENST00000417033 ASB16-AS1Q495Z4 193 aa4.5□□□□□ -1.69
MDC1-203ENST00000417033 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
MDC1-203ENST00000417033 HMCN2Q8NDA2 5059 aa4.49□□□□□ -1.69
MDC1-203ENST00000417033 IGLV7-46A0A075B6I9 117 aa4.49□□□□□ -1.69
MDC1-203ENST00000417033 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
MDC1-203ENST00000417033 LINC00846Q9NV44 126 aa4.49□□□□□ -1.69
MDC1-203ENST00000417033 Q6ZVQ6 151 aa4.47□□□□□ -1.69
MDC1-203ENST00000417033 FP248Q71RG6 208 aaPredicted RBP4.47□□□□□ -1.69
MDC1-203ENST00000417033 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
MDC1-203ENST00000417033 IGKV4-1P06312 121 aa4.46□□□□□ -1.7
MDC1-203ENST00000417033 A0A1B0GW54 56 aa4.45□□□□□ -1.7
MDC1-203ENST00000417033 C9orf92A6NGG3 77 aa4.45□□□□□ -1.7
MDC1-203ENST00000417033 NREPQ16612 68 aa4.45□□□□□ -1.7
MDC1-203ENST00000417033 KRTAP13-3Q3SY46 172 aa4.45□□□□□ -1.7
MDC1-203ENST00000417033 DSCR10P59022 87 aa4.43□□□□□ -1.7
MDC1-203ENST00000417033 NOTCH2NLQ7Z3S9 236 aa4.43□□□□□ -1.7
MDC1-203ENST00000417033 IGKV3D-7A0A0C4DH55 119 aa4.42□□□□□ -1.7
MDC1-203ENST00000417033 FAM240AA0A1B0GVK7 77 aa4.42□□□□□ -1.7
MDC1-203ENST00000417033 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
MDC1-203ENST00000417033 KRTAP15-1Q3LI76 137 aa4.42□□□□□ -1.7
MDC1-203ENST00000417033 Q8N9L7 120 aa4.42□□□□□ -1.7
MDC1-203ENST00000417033 IGHV6-1A0A0B4J1U7 121 aa4.41□□□□□ -1.7
MDC1-203ENST00000417033 K7EQZ3 153 aa4.41□□□□□ -1.7
MDC1-203ENST00000417033 BPY2O14599 106 aa4.41□□□□□ -1.7
MDC1-203ENST00000417033 UBL5Q9BZL1 73 aa4.41□□□□□ -1.7
MDC1-203ENST00000417033 A0A1B0GVX0 72 aa4.4□□□□□ -1.71
MDC1-203ENST00000417033 A8MWP4 228 aa4.4□□□□□ -1.71
MDC1-203ENST00000417033 J3KT08 172 aa4.4□□□□□ -1.71
MDC1-203ENST00000417033 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
MDC1-203ENST00000417033 ACYP1P07311 99 aa4.39□□□□□ -1.71
MDC1-203ENST00000417033 KRTAP16-1A8MUX0 517 aa4.38□□□□□ -1.71
MDC1-203ENST00000417033 PRR15Q8IV56 129 aa4.38□□□□□ -1.71
MDC1-203ENST00000417033 LPAP08519 4548 aa4.37□□□□□ -1.71
MDC1-203ENST00000417033 J3QR89 54 aa4.37□□□□□ -1.71
MDC1-203ENST00000417033 C8orf17Q9NRJ1 99 aa4.37□□□□□ -1.71
MDC1-203ENST00000417033 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
MDC1-203ENST00000417033 LINC00313P59037 77 aa4.36□□□□□ -1.71
MDC1-203ENST00000417033 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
MDC1-203ENST00000417033 NDUFB1O75438 58 aa4.35□□□□□ -1.71
MDC1-203ENST00000417033 C8orf87E5RJ46 101 aa4.34□□□□□ -1.71
MDC1-203ENST00000417033 K7ERU9 68 aa4.34□□□□□ -1.71
MDC1-203ENST00000417033 CXCL6P80162 114 aa4.34□□□□□ -1.71
MDC1-203ENST00000417033 LINC00643Q86TS7 51 aa4.34□□□□□ -1.71
MDC1-203ENST00000417033 WFDC13Q8IUB5 93 aa4.33□□□□□ -1.72
MDC1-203ENST00000417033 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
MDC1-203ENST00000417033 PCP4P48539 62 aa4.32□□□□□ -1.72
MDC1-203ENST00000417033 RPL37P61927 97 aaKnown RBP4.32□□□□□ -1.72
MDC1-203ENST00000417033 ATP5EP2Q5VTU8 51 aa4.32□□□□□ -1.72
MDC1-203ENST00000417033 C20orf166-AS1Q96NR2 134 aa4.32□□□□□ -1.72
MDC1-203ENST00000417033 LRP2P98164 4655 aa4.32□□□□□ -1.72
MDC1-203ENST00000417033 A0A087WVE0 104 aa4.31□□□□□ -1.72
MDC1-203ENST00000417033 A8MUU9 505 aa4.31□□□□□ -1.72
MDC1-203ENST00000417033 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
MDC1-203ENST00000417033 hDV103S1A0JD37 113 aa4.3□□□□□ -1.72
MDC1-203ENST00000417033 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
MDC1-203ENST00000417033 Q75L30 129 aa4.3□□□□□ -1.72
MDC1-203ENST00000417033 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
MDC1-203ENST00000417033 HCG22E2RYF7 251 aa4.29□□□□□ -1.72
MDC1-203ENST00000417033 HIST1H4AP62805 103 aaKnown RBP4.29□□□□□ -1.72
MDC1-203ENST00000417033 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
MDC1-203ENST00000417033 TMEM254Q8TBM7 123 aa4.29□□□□□ -1.72
MDC1-203ENST00000417033 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
MDC1-203ENST00000417033 Q8N9P0 234 aaPredicted RBP4.28□□□□□ -1.72
MDC1-203ENST00000417033 NDUFS5O43920 106 aa4.25□□□□□ -1.73
MDC1-203ENST00000417033 SEC61BP60468 96 aaKnown RBP4.25□□□□□ -1.73
MDC1-203ENST00000417033 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
MDC1-203ENST00000417033 Q5W150 140 aa4.23□□□□□ -1.73
MDC1-203ENST00000417033 ATP11AUNQ6ZP68 121 aa4.23□□□□□ -1.73
MDC1-203ENST00000417033 ZCCHC13Q8WW36 166 aaKnown RBP4.23□□□□□ -1.73
MDC1-203ENST00000417033 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
MDC1-203ENST00000417033 MUC2Q02817 5179 aa4.21□□□□□ -1.74
MDC1-203ENST00000417033 MPLKIPQ8TAP9 179 aa4.19□□□□□ -1.74
MDC1-203ENST00000417033 IMUPQ9GZP8 106 aa4.19□□□□□ -1.74
MDC1-203ENST00000417033 FAM236AA0A1B0GUQ0 79 aa4.18□□□□□ -1.74
MDC1-203ENST00000417033 FAM236BA0A1B0GV22 79 aa4.18□□□□□ -1.74
MDC1-203ENST00000417033 OCR1Q9BZK8 76 aa4.16□□□□□ -1.74
MDC1-203ENST00000417033 SPINK7P58062 85 aa4.15□□□□□ -1.75
MDC1-203ENST00000417033 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
MDC1-203ENST00000417033 IGKV2-30P06310 120 aa4.14□□□□□ -1.75
MDC1-203ENST00000417033 HRES1P13985 223 aa4.14□□□□□ -1.75
MDC1-203ENST00000417033 KRTAP19-2Q3LHN2 52 aa4.14□□□□□ -1.75
MDC1-203ENST00000417033 TP53AIP1Q9HCN2 124 aa4.14□□□□□ -1.75
MDC1-203ENST00000417033 UQCRQO14949 82 aa4.13□□□□□ -1.75
MDC1-203ENST00000417033 SCGB1A1P11684 91 aa4.13□□□□□ -1.75
MDC1-203ENST00000417033 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
MDC1-203ENST00000417033 H0Y9P7 68 aa4.12□□□□□ -1.75
MDC1-203ENST00000417033 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
MDC1-203ENST00000417033 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
MDC1-203ENST00000417033 ATOX1O00244 68 aa4.08□□□□□ -1.76
MDC1-203ENST00000417033 TRAV7A0A075B6U4 112 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms