RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TPRXLQ17RH7 258 aa2.71□□□□□ -1.98
VPS41-205ENST00000414632 CLEC2BQ92478 149 aa2.71□□□□□ -1.98
VPS41-205ENST00000414632 SPCS1Q9Y6A9 102 aa2.71□□□□□ -1.98
VPS41-205ENST00000414632 A0A1W2PPM0 123 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 C9orf92A6NGG3 77 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 PSMB2P49721 201 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 RPS29P62273 56 aaKnown RBP2.7□□□□□ -1.98
VPS41-205ENST00000414632 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.7□□□□□ -1.98
VPS41-205ENST00000414632 GTF2H5Q6ZYL4 71 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 FP248Q71RG6 208 aaPredicted RBP2.7□□□□□ -1.98
VPS41-205ENST00000414632 LIMD2Q9BT23 127 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 PRO0461Q9UI25 63 aa2.7□□□□□ -1.98
VPS41-205ENST00000414632 H0YGX0 51 aa2.69□□□□□ -1.98
VPS41-205ENST00000414632 IGFL1Q6UW32 110 aa2.69□□□□□ -1.98
VPS41-205ENST00000414632 FABP2P12104 132 aa2.68□□□□□ -1.98
VPS41-205ENST00000414632 KRTAP10-7P60409 375 aaPredicted RBP2.68□□□□□ -1.98
VPS41-205ENST00000414632 CD164Q04900 197 aa2.68□□□□□ -1.98
VPS41-205ENST00000414632 C5orf47Q569G3 176 aa2.68□□□□□ -1.98
VPS41-205ENST00000414632 SNCGO76070 127 aa2.67□□□□□ -1.98
VPS41-205ENST00000414632 SCGB1C2P0DMR2 95 aa2.67□□□□□ -1.98
VPS41-205ENST00000414632 C1orf195Q5TG92 126 aa2.67□□□□□ -1.98
VPS41-205ENST00000414632 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
VPS41-205ENST00000414632 TRBV7-7A0A0K0K1E9 115 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 H3BMG7 143 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 DNAL4O96015 105 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 ETDBQ3ZM63 59 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 Q6JHZ5 121 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 PPDPFLQ8WWR9 84 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 V9GYY9 64 aa2.66□□□□□ -1.98
VPS41-205ENST00000414632 A0A1B0GX51 115 aa2.65□□□□□ -1.99
VPS41-205ENST00000414632 TCL1BO95988 128 aa2.65□□□□□ -1.99
VPS41-205ENST00000414632 COX6CP09669 75 aa2.65□□□□□ -1.99
VPS41-205ENST00000414632 ORMDL1Q9P0S3 153 aa2.65□□□□□ -1.99
VPS41-205ENST00000414632 SMIM26A0A096LP01 95 aa2.64□□□□□ -1.99
VPS41-205ENST00000414632 LST1O00453 97 aa2.64□□□□□ -1.99
VPS41-205ENST00000414632 Q5XG85 94 aa2.64□□□□□ -1.99
VPS41-205ENST00000414632 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
VPS41-205ENST00000414632 A0A087WSZ3 146 aa2.63□□□□□ -1.99
VPS41-205ENST00000414632 A0A1W2PNM2 257 aa2.63□□□□□ -1.99
VPS41-205ENST00000414632 TRACP01848 142 aa2.63□□□□□ -1.99
VPS41-205ENST00000414632 ASB16-AS1Q495Z4 193 aa2.63□□□□□ -1.99
VPS41-205ENST00000414632 TEN1Q86WV5 123 aa2.63□□□□□ -1.99
VPS41-205ENST00000414632 TRBV20-1A0A075B6N2 111 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 F8W1H4 67 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 J3QR89 54 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 TMEM256-PLSCR3K7ERE1 68 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 PCOTHQ58A44 107 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 ANKRD29Q8N6D5 301 aa2.62□□□□□ -1.99
VPS41-205ENST00000414632 A0A1B0GVX0 72 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 CCKP06307 115 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 BAALC-AS2P0C853 105 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 ATXN8Q156A1 80 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 DEFB116Q30KQ4 102 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 Q6Q795 121 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 OBSCN-AS1Q96MR7 158 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 Q96NJ1 140 aa2.61□□□□□ -1.99
VPS41-205ENST00000414632 A0A0U1RQV1 116 aa2.6□□□□□ -1.99
VPS41-205ENST00000414632 KRTAP5-9P26371 169 aa2.6□□□□□ -1.99
VPS41-205ENST00000414632 TRBV7-4A0A0J9YYF1 115 aa2.59□□□□□ -1.99
VPS41-205ENST00000414632 C9JAW5 83 aa2.59□□□□□ -1.99
VPS41-205ENST00000414632 H3BQ85 93 aa2.59□□□□□ -1.99
VPS41-205ENST00000414632 RPL37P61927 97 aaKnown RBP2.59□□□□□ -1.99
VPS41-205ENST00000414632 RBM3P98179 157 aaKnown RBP2.59□□□□□ -1.99
VPS41-205ENST00000414632 J3KT08 172 aa2.58□□□□□ -2
VPS41-205ENST00000414632 IGKV4-1P06312 121 aa2.58□□□□□ -2
VPS41-205ENST00000414632 KRTAP10-6P60371 365 aaPredicted RBP2.58□□□□□ -2
VPS41-205ENST00000414632 DSCR8Q96T75 97 aa2.58□□□□□ -2
VPS41-205ENST00000414632 CYSTM1Q9H1C7 97 aa2.58□□□□□ -2
VPS41-205ENST00000414632 C14orf132Q9NPU4 83 aa2.58□□□□□ -2
VPS41-205ENST00000414632 FAM240AA0A1B0GVK7 77 aa2.57□□□□□ -2
VPS41-205ENST00000414632 LYRM7Q5U5X0 104 aa2.57□□□□□ -2
VPS41-205ENST00000414632 IGHV6-1A0A0B4J1U7 121 aa2.56□□□□□ -2
VPS41-205ENST00000414632 FAM236AA0A1B0GUQ0 79 aa2.56□□□□□ -2
VPS41-205ENST00000414632 FAM236BA0A1B0GV22 79 aa2.56□□□□□ -2
VPS41-205ENST00000414632 A8MU10 97 aa2.56□□□□□ -2
VPS41-205ENST00000414632 C4orf26Q17RF5 130 aa2.56□□□□□ -2
VPS41-205ENST00000414632 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
VPS41-205ENST00000414632 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
VPS41-205ENST00000414632 Q6ZQT0 140 aa2.56□□□□□ -2
VPS41-205ENST00000414632 LINC00472Q9H8W2 130 aa2.56□□□□□ -2
VPS41-205ENST00000414632 JMJD7-PLA2G4BH0Y9G9 81 aa2.55□□□□□ -2
VPS41-205ENST00000414632 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
VPS41-205ENST00000414632 A8MUU9 505 aa2.54□□□□□ -2
VPS41-205ENST00000414632 BPY2O14599 106 aa2.54□□□□□ -2
VPS41-205ENST00000414632 PSPHP1O15172 72 aa2.54□□□□□ -2
VPS41-205ENST00000414632 LINC00313P59037 77 aa2.54□□□□□ -2
VPS41-205ENST00000414632 KRTAP19-2Q3LHN2 52 aa2.54□□□□□ -2
VPS41-205ENST00000414632 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
VPS41-205ENST00000414632 ATP11AUNQ6ZP68 121 aa2.54□□□□□ -2
VPS41-205ENST00000414632 C8orf17Q9NRJ1 99 aa2.54□□□□□ -2
VPS41-205ENST00000414632 FLGP20930 4061 aaPredicted RBP2.53□□□□□ -2
VPS41-205ENST00000414632 H3BT86 120 aa2.53□□□□□ -2
VPS41-205ENST00000414632 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
VPS41-205ENST00000414632 RPS28P62857 69 aaKnown RBP2.52□□□□□ -2.01
VPS41-205ENST00000414632 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
VPS41-205ENST00000414632 CRCT1Q9UGL9 99 aa2.52□□□□□ -2.01
VPS41-205ENST00000414632 NDUFS5O43920 106 aa2.51□□□□□ -2.01
VPS41-205ENST00000414632 MT1HP80294 61 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms