RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 DEFB121Q5J5C9 76 aa1.43□□□□□ -2.18
LSM5-205ENST00000409952 SMCO4Q9NRQ5 59 aa1.43□□□□□ -2.18
LSM5-205ENST00000409952 TRBV7-4A0A0J9YYF1 115 aa1.42□□□□□ -2.18
LSM5-205ENST00000409952 CNFNQ9BYD5 112 aa1.42□□□□□ -2.18
LSM5-205ENST00000409952 CACNA1CQ13936 2221 aa1.42□□□□□ -2.18
LSM5-205ENST00000409952 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
LSM5-205ENST00000409952 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
LSM5-205ENST00000409952 COX6A2Q02221 97 aa1.41□□□□□ -2.18
LSM5-205ENST00000409952 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
LSM5-205ENST00000409952 WNK2Q9Y3S1 2297 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 TP53AIP1Q9HCN2 124 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 PLCE1Q9P212 2302 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 NEBP20929 6669 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 MYH4Q9Y623 1939 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 KIF20BQ96Q89 1820 aa1.4□□□□□ -2.19
LSM5-205ENST00000409952 PDCD5O14737 125 aa1.39□□□□□ -2.19
LSM5-205ENST00000409952 CFDP00746 253 aaPredicted RBP1.39□□□□□ -2.19
LSM5-205ENST00000409952 DNAJC13O75165 2243 aa1.39□□□□□ -2.19
LSM5-205ENST00000409952 DYNC2H1Q8NCM8 4307 aaKnown RBP1.38□□□□□ -2.19
LSM5-205ENST00000409952 I3L2K1 104 aa1.38□□□□□ -2.19
LSM5-205ENST00000409952 Q9Y3F1 56 aa1.38□□□□□ -2.19
LSM5-205ENST00000409952 SMIM13P0DJ93 91 aa1.37□□□□□ -2.19
LSM5-205ENST00000409952 DEFA5Q01523 94 aa1.37□□□□□ -2.19
LSM5-205ENST00000409952 USF3Q68DE3 2245 aa1.37□□□□□ -2.19
LSM5-205ENST00000409952 DEFB112Q30KQ8 113 aa1.36□□□□□ -2.19
LSM5-205ENST00000409952 PIGYQ3MUY2 71 aa1.36□□□□□ -2.19
LSM5-205ENST00000409952 ATP5EP2Q5VTU8 51 aa1.36□□□□□ -2.19
LSM5-205ENST00000409952 SYNE2Q8WXH0 6885 aaKnown RBP1.36□□□□□ -2.19
LSM5-205ENST00000409952 DNAH1Q9P2D7 4330 aa1.36□□□□□ -2.19
LSM5-205ENST00000409952 CMYA5Q8N3K9 4069 aa1.35□□□□□ -2.19
LSM5-205ENST00000409952 PRO0255Q9UI72 69 aa1.35□□□□□ -2.19
LSM5-205ENST00000409952 HECTD4Q9Y4D8 3996 aa1.35□□□□□ -2.19
LSM5-205ENST00000409952 FRAS1Q86XX4 4008 aa1.33□□□□□ -2.2
LSM5-205ENST00000409952 DEFB109BQ30KR1 87 aa1.33□□□□□ -2.2
LSM5-205ENST00000409952 SACSQ9NZJ4 4579 aa1.33□□□□□ -2.2
LSM5-205ENST00000409952 TRAV21A0A0B4J279 112 aa1.32□□□□□ -2.2
LSM5-205ENST00000409952 UMAD1C9J7I0 102 aa1.32□□□□□ -2.2
LSM5-205ENST00000409952 NDUFB1O75438 58 aa1.32□□□□□ -2.2
LSM5-205ENST00000409952 A0A087WXM4 84 aa1.31□□□□□ -2.2
LSM5-205ENST00000409952 PRB3Q04118 309 aaPredicted RBP1.31□□□□□ -2.2
LSM5-205ENST00000409952 GAFA1Q96PS6 74 aa1.31□□□□□ -2.2
LSM5-205ENST00000409952 LYSTQ99698 3801 aa1.31□□□□□ -2.2
LSM5-205ENST00000409952 SSPOA2VEC9 5147 aa1.31□□□□□ -2.2
LSM5-205ENST00000409952 CSMD3Q7Z407 3707 aa1.3□□□□□ -2.2
LSM5-205ENST00000409952 IFI27P40305 119 aaPredicted RBP1.3□□□□□ -2.2
LSM5-205ENST00000409952 KRTAP20-1Q3LI63 56 aa1.3□□□□□ -2.2
LSM5-205ENST00000409952 Q8IZM0 81 aa1.3□□□□□ -2.2
LSM5-205ENST00000409952 HMCN2Q8NDA2 5059 aa1.3□□□□□ -2.2
LSM5-205ENST00000409952 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
LSM5-205ENST00000409952 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
LSM5-205ENST00000409952 CD52P31358 61 aa1.29□□□□□ -2.2
LSM5-205ENST00000409952 HRNRQ86YZ3 2850 aaPredicted RBP1.29□□□□□ -2.2
LSM5-205ENST00000409952 KMT2AQ03164 3969 aa1.28□□□□□ -2.2
LSM5-205ENST00000409952 WFDC9Q8NEX5 89 aa1.28□□□□□ -2.2
LSM5-205ENST00000409952 USMG5Q96IX5 58 aa1.28□□□□□ -2.2
LSM5-205ENST00000409952 SMIM31A0A1B0GVY4 71 aa1.27□□□□□ -2.21
LSM5-205ENST00000409952 COX7BP24311 80 aa1.27□□□□□ -2.21
LSM5-205ENST00000409952 Q5BKY6 102 aa1.27□□□□□ -2.21
LSM5-205ENST00000409952 HEPN1Q6WQI6 88 aa1.27□□□□□ -2.21
LSM5-205ENST00000409952 PKHD1P08F94 4074 aa1.27□□□□□ -2.21
LSM5-205ENST00000409952 K7EQZ3 153 aa1.26□□□□□ -2.21
LSM5-205ENST00000409952 IFI6P09912 130 aa1.26□□□□□ -2.21
LSM5-205ENST00000409952 AHNAK2Q8IVF2 5795 aa1.25□□□□□ -2.21
LSM5-205ENST00000409952 FXYD6-FXYD2A0A087WZ82 144 aa1.25□□□□□ -2.21
LSM5-205ENST00000409952 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
LSM5-205ENST00000409952 ANK3Q12955 4377 aaKnown RBP1.24□□□□□ -2.21
LSM5-205ENST00000409952 SPTY2D1-AS1A0A0U1RR47 76 aa1.24□□□□□ -2.21
LSM5-205ENST00000409952 LELP1Q5T871 98 aa1.23□□□□□ -2.21
LSM5-205ENST00000409952 HSPG2P98160 4391 aa1.23□□□□□ -2.21
LSM5-205ENST00000409952 I3L3M4 83 aa1.21□□□□□ -2.22
LSM5-205ENST00000409952 COX8AP10176 69 aa1.21□□□□□ -2.22
LSM5-205ENST00000409952 RPL38P63173 70 aaKnown RBP1.21□□□□□ -2.22
LSM5-205ENST00000409952 MYCBP2O75592 4640 aa1.2□□□□□ -2.22
LSM5-205ENST00000409952 STATHP02808 62 aa1.2□□□□□ -2.22
LSM5-205ENST00000409952 HMGA1P17096 107 aaKnown RBP1.2□□□□□ -2.22
LSM5-205ENST00000409952 ANKRD36A6QL64 1941 aa1.2□□□□□ -2.22
LSM5-205ENST00000409952 HUWE1Q7Z6Z7 4374 aaKnown RBP1.19□□□□□ -2.22
LSM5-205ENST00000409952 DNAH7Q8WXX0 4024 aa1.19□□□□□ -2.22
LSM5-205ENST00000409952 ALMS1Q8TCU4 4167 aa1.19□□□□□ -2.22
LSM5-205ENST00000409952 NREPQ16612 68 aa1.19□□□□□ -2.22
LSM5-205ENST00000409952 Q5VSD8 79 aa1.19□□□□□ -2.22
LSM5-205ENST00000409952 CPSF4LA6NMK7 179 aaKnown RBP1.18□□□□□ -2.22
LSM5-205ENST00000409952 H3BVH4 76 aa1.18□□□□□ -2.22
LSM5-205ENST00000409952 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
LSM5-205ENST00000409952 DYNC1H1Q14204 4646 aaKnown RBP1.17□□□□□ -2.22
LSM5-205ENST00000409952 FAT2Q9NYQ8 4349 aa1.17□□□□□ -2.22
LSM5-205ENST00000409952 AHNAKQ09666 5890 aaKnown RBP1.17□□□□□ -2.22
LSM5-205ENST00000409952 LRP2P98164 4655 aa1.16□□□□□ -2.22
LSM5-205ENST00000409952 TFF3Q07654 80 aa1.16□□□□□ -2.22
LSM5-205ENST00000409952 USH2AO75445 5202 aa1.15□□□□□ -2.22
LSM5-205ENST00000409952 DEFB133Q30KQ1 61 aa1.15□□□□□ -2.23
LSM5-205ENST00000409952 U3KQA8 63 aa1.15□□□□□ -2.23
LSM5-205ENST00000409952 STARD9Q9P2P6 4700 aa1.15□□□□□ -2.23
LSM5-205ENST00000409952 SPRR1AP35321 89 aa1.14□□□□□ -2.23
LSM5-205ENST00000409952 KRTAP19-3Q7Z4W3 81 aa1.14□□□□□ -2.23
LSM5-205ENST00000409952 MRPL34Q9BQ48 92 aaKnown RBP1.14□□□□□ -2.23
LSM5-205ENST00000409952 HILPDAQ9Y5L2 63 aa1.14□□□□□ -2.23
LSM5-205ENST00000409952 PKHD1L1Q86WI1 4243 aa1.13□□□□□ -2.23
LSM5-205ENST00000409952 PLECQ15149 4684 aaKnown RBP1.13□□□□□ -2.23
LSM5-205ENST00000409952 DNAH10Q8IVF4 4471 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms