RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 IGLV9-49A0A0B4J1Y8 123 aa9.2□□□□□ -0.94
SCAMP4-202ENST00000409472 ANAPC11Q9NYG5 84 aa9.2□□□□□ -0.94
SCAMP4-202ENST00000409472 C7orf65Q6ZTY9 151 aa9.2□□□□□ -0.94
SCAMP4-202ENST00000409472 KRTAP10-2P60368 255 aa9.19□□□□□ -0.94
SCAMP4-202ENST00000409472 LCA10Q71F78 164 aa9.19□□□□□ -0.94
SCAMP4-202ENST00000409472 H3BPC8 53 aa9.18□□□□□ -0.94
SCAMP4-202ENST00000409472 LOC101927531A0A1B0GV80 90 aa9.17□□□□□ -0.94
SCAMP4-202ENST00000409472 CDC42SE1Q9NRR8 79 aa9.17□□□□□ -0.94
SCAMP4-202ENST00000409472 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
SCAMP4-202ENST00000409472 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
SCAMP4-202ENST00000409472 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
SCAMP4-202ENST00000409472 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
SCAMP4-202ENST00000409472 WWC2-AS2Q96NR7 200 aa9.12□□□□□ -0.95
SCAMP4-202ENST00000409472 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
SCAMP4-202ENST00000409472 ZNF861PO60384 105 aa9.1□□□□□ -0.95
SCAMP4-202ENST00000409472 MOBPQ13875 183 aa9.1□□□□□ -0.95
SCAMP4-202ENST00000409472 H0Y9P7 68 aa9.09□□□□□ -0.95
SCAMP4-202ENST00000409472 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
SCAMP4-202ENST00000409472 SACSQ9NZJ4 4579 aa9.06□□□□□ -0.96
SCAMP4-202ENST00000409472 COA5Q86WW8 74 aa9.06□□□□□ -0.96
SCAMP4-202ENST00000409472 Q96NJ1 140 aa9.06□□□□□ -0.96
SCAMP4-202ENST00000409472 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
SCAMP4-202ENST00000409472 C8orf87E5RJ46 101 aa9.06□□□□□ -0.96
SCAMP4-202ENST00000409472 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
SCAMP4-202ENST00000409472 A8MWP4 228 aa9.05□□□□□ -0.96
SCAMP4-202ENST00000409472 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
SCAMP4-202ENST00000409472 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
SCAMP4-202ENST00000409472 KRTAP29-1A8MX34 341 aaPredicted RBP9.04□□□□□ -0.96
SCAMP4-202ENST00000409472 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
SCAMP4-202ENST00000409472 VPS13BQ7Z7G8 4022 aa9□□□□□ -0.97
SCAMP4-202ENST00000409472 CASC2Q6XLA1 102 aa9□□□□□ -0.97
SCAMP4-202ENST00000409472 IGLV7-46A0A075B6I9 117 aa8.99□□□□□ -0.97
SCAMP4-202ENST00000409472 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
SCAMP4-202ENST00000409472 Q6ZSA8 131 aa8.98□□□□□ -0.97
SCAMP4-202ENST00000409472 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
SCAMP4-202ENST00000409472 A0A087X002 238 aa8.92□□□□□ -0.98
SCAMP4-202ENST00000409472 NOTCH2NLQ7Z3S9 236 aa8.91□□□□□ -0.98
SCAMP4-202ENST00000409472 IGHV6-1A0A0B4J1U7 121 aa8.9□□□□□ -0.98
SCAMP4-202ENST00000409472 SPINK7P58062 85 aa8.89□□□□□ -0.99
SCAMP4-202ENST00000409472 LINC00313P59037 77 aa8.89□□□□□ -0.99
SCAMP4-202ENST00000409472 KRTAP13-2Q52LG2 175 aa8.88□□□□□ -0.99
SCAMP4-202ENST00000409472 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
SCAMP4-202ENST00000409472 DYNC1H1Q14204 4646 aaKnown RBP8.88□□□□□ -0.99
SCAMP4-202ENST00000409472 C8orf17Q9NRJ1 99 aa8.87□□□□□ -0.99
SCAMP4-202ENST00000409472 A0A1B0GVX0 72 aa8.87□□□□□ -0.99
SCAMP4-202ENST00000409472 H3BS24 57 aa8.87□□□□□ -0.99
SCAMP4-202ENST00000409472 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
SCAMP4-202ENST00000409472 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
SCAMP4-202ENST00000409472 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
SCAMP4-202ENST00000409472 KRTAP1-4P0C5Y4 121 aa8.82□□□□□ -1
SCAMP4-202ENST00000409472 PCOTHQ58A44 107 aa8.82□□□□□ -1
SCAMP4-202ENST00000409472 PLA2G1BP04054 148 aaKnown RBP8.81□□□□□ -1
SCAMP4-202ENST00000409472 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
SCAMP4-202ENST00000409472 RYR2Q92736 4967 aa8.81□□□□□ -1
SCAMP4-202ENST00000409472 CDK2AP2O75956 126 aa8.8□□□□□ -1
SCAMP4-202ENST00000409472 PRAC1Q96KF2 57 aa8.79□□□□□ -1
SCAMP4-202ENST00000409472 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
SCAMP4-202ENST00000409472 FAT1Q14517 4588 aa8.78□□□□□ -1
SCAMP4-202ENST00000409472 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
SCAMP4-202ENST00000409472 HRES1P13985 223 aa8.77□□□□□ -1.01
SCAMP4-202ENST00000409472 MRPL34Q9BQ48 92 aaKnown RBP8.76□□□□□ -1.01
SCAMP4-202ENST00000409472 SMR3BP02814 79 aaPredicted RBP8.71□□□□□ -1.02
SCAMP4-202ENST00000409472 A0A1B0GVY2 172 aa8.68□□□□□ -1.02
SCAMP4-202ENST00000409472 Q5W150 140 aa8.68□□□□□ -1.02
SCAMP4-202ENST00000409472 ADM2Q7Z4H4 148 aa8.68□□□□□ -1.02
SCAMP4-202ENST00000409472 RYR3Q15413 4870 aa8.68□□□□□ -1.02
SCAMP4-202ENST00000409472 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
SCAMP4-202ENST00000409472 PRR26Q8N8Z3 221 aa8.63□□□□□ -1.03
SCAMP4-202ENST00000409472 TYMSOSQ8TAI1 123 aa8.63□□□□□ -1.03
SCAMP4-202ENST00000409472 RETNLBQ9BQ08 111 aa8.6□□□□□ -1.03
SCAMP4-202ENST00000409472 SPATA8Q6RVD6 105 aa8.59□□□□□ -1.03
SCAMP4-202ENST00000409472 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
SCAMP4-202ENST00000409472 ACYP2P14621 99 aa8.58□□□□□ -1.04
SCAMP4-202ENST00000409472 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
SCAMP4-202ENST00000409472 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
SCAMP4-202ENST00000409472 A0A1B0GU69 56 aa8.56□□□□□ -1.04
SCAMP4-202ENST00000409472 MIR22HGQ0VDD5 57 aa8.52□□□□□ -1.05
SCAMP4-202ENST00000409472 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
SCAMP4-202ENST00000409472 SPINK1P00995 79 aa8.51□□□□□ -1.05
SCAMP4-202ENST00000409472 UQCR11O14957 56 aa8.51□□□□□ -1.05
SCAMP4-202ENST00000409472 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
SCAMP4-202ENST00000409472 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.05
SCAMP4-202ENST00000409472 HSPG2P98160 4391 aa8.46□□□□□ -1.05
SCAMP4-202ENST00000409472 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
SCAMP4-202ENST00000409472 DMAC1Q96GE9 116 aa8.45□□□□□ -1.06
SCAMP4-202ENST00000409472 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
SCAMP4-202ENST00000409472 RPS29P62273 56 aaKnown RBP8.39□□□□□ -1.07
SCAMP4-202ENST00000409472 TNXBP22105 4242 aa8.38□□□□□ -1.07
SCAMP4-202ENST00000409472 IGKV2D-30A0A075B6S6 120 aa8.37□□□□□ -1.07
SCAMP4-202ENST00000409472 EPPK1P58107 5090 aaKnown RBP8.37□□□□□ -1.07
SCAMP4-202ENST00000409472 C9orf92A6NGG3 77 aa8.36□□□□□ -1.07
SCAMP4-202ENST00000409472 RYR1P21817 5038 aa8.35□□□□□ -1.07
SCAMP4-202ENST00000409472 FLG2Q5D862 2391 aaPredicted RBP8.35□□□□□ -1.07
SCAMP4-202ENST00000409472 KRTAP17-1Q9BYP8 105 aa8.34□□□□□ -1.07
SCAMP4-202ENST00000409472 KIAA1109Q2LD37 5005 aa8.32□□□□□ -1.08
SCAMP4-202ENST00000409472 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
SCAMP4-202ENST00000409472 Q5VSD8 79 aa8.27□□□□□ -1.09
SCAMP4-202ENST00000409472 MYCBP2O75592 4640 aa8.27□□□□□ -1.09
SCAMP4-202ENST00000409472 Q8N1X5 172 aa8.27□□□□□ -1.09
SCAMP4-202ENST00000409472 ROMO1P60602 79 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms