RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SPRR1BP22528 89 aa8.07□□□□□ -1.12
COL6A2-204ENST00000409416 Q6ZRN7 208 aaPredicted RBP8.05□□□□□ -1.12
COL6A2-204ENST00000409416 CYP4F30PQ9H0H9 118 aa8.05□□□□□ -1.12
COL6A2-204ENST00000409416 ZNF861PO60384 105 aa8.05□□□□□ -1.12
COL6A2-204ENST00000409416 SPINK1P00995 79 aa8.04□□□□□ -1.12
COL6A2-204ENST00000409416 PRKDCP78527 4128 aaKnown RBP8.04□□□□□ -1.12
COL6A2-204ENST00000409416 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
COL6A2-204ENST00000409416 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
COL6A2-204ENST00000409416 C8orf17Q9NRJ1 99 aa8.03□□□□□ -1.12
COL6A2-204ENST00000409416 COA5Q86WW8 74 aa8.02□□□□□ -1.13
COL6A2-204ENST00000409416 ZNF706Q9Y5V0 76 aaPredicted RBP8.01□□□□□ -1.13
COL6A2-204ENST00000409416 DNAH3Q8TD57 4116 aa8.01□□□□□ -1.13
COL6A2-204ENST00000409416 LOC101927531A0A1B0GV80 90 aa8.01□□□□□ -1.13
COL6A2-204ENST00000409416 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
COL6A2-204ENST00000409416 STARD9Q9P2P6 4700 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 A6NN06 94 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 H3BPC8 53 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 LINC00313P59037 77 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
COL6A2-204ENST00000409416 CDC42SE1Q9NRR8 79 aa7.98□□□□□ -1.13
COL6A2-204ENST00000409416 KMT2AQ03164 3969 aa7.98□□□□□ -1.13
COL6A2-204ENST00000409416 PLA2G1BP04054 148 aaKnown RBP7.97□□□□□ -1.13
COL6A2-204ENST00000409416 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
COL6A2-204ENST00000409416 A0A1B0GVX0 72 aa7.97□□□□□ -1.13
COL6A2-204ENST00000409416 SPINK7P58062 85 aa7.97□□□□□ -1.13
COL6A2-204ENST00000409416 Q96NJ1 140 aa7.96□□□□□ -1.14
COL6A2-204ENST00000409416 WWC2-AS2Q96NR7 200 aa7.96□□□□□ -1.14
COL6A2-204ENST00000409416 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
COL6A2-204ENST00000409416 C9orf92A6NGG3 77 aa7.94□□□□□ -1.14
COL6A2-204ENST00000409416 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
COL6A2-204ENST00000409416 Q75L30 129 aa7.93□□□□□ -1.14
COL6A2-204ENST00000409416 TP53AIP1Q9HCN2 124 aa7.93□□□□□ -1.14
COL6A2-204ENST00000409416 LINC01554Q52M75 96 aa7.91□□□□□ -1.14
COL6A2-204ENST00000409416 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
COL6A2-204ENST00000409416 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
COL6A2-204ENST00000409416 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
COL6A2-204ENST00000409416 Q6ZR54 194 aa7.88□□□□□ -1.15
COL6A2-204ENST00000409416 LINC00483Q53H64 154 aa7.87□□□□□ -1.15
COL6A2-204ENST00000409416 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
COL6A2-204ENST00000409416 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
COL6A2-204ENST00000409416 Q5W150 140 aa7.84□□□□□ -1.15
COL6A2-204ENST00000409416 DNAH11Q96DT5 4516 aa7.84□□□□□ -1.15
COL6A2-204ENST00000409416 HRES1P13985 223 aa7.82□□□□□ -1.16
COL6A2-204ENST00000409416 Q8N1X5 172 aa7.81□□□□□ -1.16
COL6A2-204ENST00000409416 ASB16-AS1Q495Z4 193 aa7.76□□□□□ -1.17
COL6A2-204ENST00000409416 CSAG1Q6PB30 78 aa7.75□□□□□ -1.17
COL6A2-204ENST00000409416 KRTAP13-2Q52LG2 175 aa7.75□□□□□ -1.17
COL6A2-204ENST00000409416 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
COL6A2-204ENST00000409416 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
COL6A2-204ENST00000409416 DNAH6Q9C0G6 4158 aa7.72□□□□□ -1.17
COL6A2-204ENST00000409416 SSBP3-AS1Q7Z2R9 100 aa7.7□□□□□ -1.18
COL6A2-204ENST00000409416 A0A1B0GU69 56 aa7.7□□□□□ -1.18
COL6A2-204ENST00000409416 ACYP2P14621 99 aa7.7□□□□□ -1.18
COL6A2-204ENST00000409416 VPS13DQ5THJ4 4388 aa7.67□□□□□ -1.18
COL6A2-204ENST00000409416 LINC00304Q8N9R0 145 aa7.67□□□□□ -1.18
COL6A2-204ENST00000409416 HECTD4Q9Y4D8 3996 aa7.66□□□□□ -1.18
COL6A2-204ENST00000409416 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
COL6A2-204ENST00000409416 HYDINQ4G0P3 5121 aa7.65□□□□□ -1.19
COL6A2-204ENST00000409416 DNAH17Q9UFH2 4485 aa7.64□□□□□ -1.19
COL6A2-204ENST00000409416 FAT1Q14517 4588 aa7.62□□□□□ -1.19
COL6A2-204ENST00000409416 DNAH2Q9P225 4427 aa7.62□□□□□ -1.19
COL6A2-204ENST00000409416 LRP1BQ9NZR2 4599 aa7.61□□□□□ -1.19
COL6A2-204ENST00000409416 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
COL6A2-204ENST00000409416 DYNC2H1Q8NCM8 4307 aaKnown RBP7.6□□□□□ -1.19
COL6A2-204ENST00000409416 KRTAP13-3Q3SY46 172 aa7.57□□□□□ -1.2
COL6A2-204ENST00000409416 CRIPTQ9P021 101 aa7.56□□□□□ -1.2
COL6A2-204ENST00000409416 DMAC1Q96GE9 116 aa7.55□□□□□ -1.2
COL6A2-204ENST00000409416 UQCR11O14957 56 aa7.54□□□□□ -1.2
COL6A2-204ENST00000409416 KRTAP1-4P0C5Y4 121 aa7.52□□□□□ -1.21
COL6A2-204ENST00000409416 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
COL6A2-204ENST00000409416 DNAH5Q8TE73 4624 aa7.49□□□□□ -1.21
COL6A2-204ENST00000409416 MYCBP2O75592 4640 aa7.47□□□□□ -1.21
COL6A2-204ENST00000409416 KRTAP16-1A8MUX0 517 aa7.45□□□□□ -1.22
COL6A2-204ENST00000409416 Q6ZSA8 131 aa7.43□□□□□ -1.22
COL6A2-204ENST00000409416 ALMS1Q8TCU4 4167 aa7.42□□□□□ -1.22
COL6A2-204ENST00000409416 VPS13BQ7Z7G8 4022 aa7.41□□□□□ -1.22
COL6A2-204ENST00000409416 SPATA8Q6RVD6 105 aa7.38□□□□□ -1.23
COL6A2-204ENST00000409416 Q5VSD8 79 aa7.36□□□□□ -1.23
COL6A2-204ENST00000409416 A0A0D9SG42 100 aa7.36□□□□□ -1.23
COL6A2-204ENST00000409416 ROMO1P60602 79 aa7.35□□□□□ -1.23
COL6A2-204ENST00000409416 SPINT4Q6UDR6 99 aa7.34□□□□□ -1.23
COL6A2-204ENST00000409416 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
COL6A2-204ENST00000409416 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
COL6A2-204ENST00000409416 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
COL6A2-204ENST00000409416 LRP1Q07954 4544 aaKnown RBP7.31□□□□□ -1.24
COL6A2-204ENST00000409416 DYNC1H1Q14204 4646 aaKnown RBP7.31□□□□□ -1.24
COL6A2-204ENST00000409416 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
COL6A2-204ENST00000409416 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
COL6A2-204ENST00000409416 PKD1P98161 4303 aa7.21□□□□□ -1.26
COL6A2-204ENST00000409416 K7ERS5 55 aa7.2□□□□□ -1.26
COL6A2-204ENST00000409416 A8MUU9 505 aa7.18□□□□□ -1.26
COL6A2-204ENST00000409416 SACSQ9NZJ4 4579 aa7.18□□□□□ -1.26
COL6A2-204ENST00000409416 APOBP04114 4563 aaKnown RBP7.17□□□□□ -1.26
COL6A2-204ENST00000409416 A0A0A0MQY5 61 aa7.17□□□□□ -1.26
COL6A2-204ENST00000409416 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
COL6A2-204ENST00000409416 A0A1B0GU33 70 aa7.14□□□□□ -1.27
COL6A2-204ENST00000409416 RYR1P21817 5038 aa7.13□□□□□ -1.27
COL6A2-204ENST00000409416 H0YAA0 97 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms