RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
LRRTM1-202ENST00000409148 FAT2Q9NYQ8 4349 aa10.19□□□□□ -0.78
LRRTM1-202ENST00000409148 MMP24-AS1A0A0U1RRL7 71 aa10.18□□□□□ -0.78
LRRTM1-202ENST00000409148 CD164Q04900 197 aa10.18□□□□□ -0.78
LRRTM1-202ENST00000409148 CDK2AP2O75956 126 aa10.16□□□□□ -0.78
LRRTM1-202ENST00000409148 MP68P56378 58 aa10.16□□□□□ -0.78
LRRTM1-202ENST00000409148 A8MU10 97 aa10.15□□□□□ -0.78
LRRTM1-202ENST00000409148 SPANXA2-OT1Q8N9U9 137 aa10.15□□□□□ -0.79
LRRTM1-202ENST00000409148 A0A1B0GVX0 72 aa10.13□□□□□ -0.79
LRRTM1-202ENST00000409148 Q8N9P0 234 aaPredicted RBP10.13□□□□□ -0.79
LRRTM1-202ENST00000409148 C8orf17Q9NRJ1 99 aa10.12□□□□□ -0.79
LRRTM1-202ENST00000409148 LIMD2Q9BT23 127 aa10.12□□□□□ -0.79
LRRTM1-202ENST00000409148 LINC00208Q96KT6 92 aa10.11□□□□□ -0.79
LRRTM1-202ENST00000409148 IGHV6-1A0A0B4J1U7 121 aa10.1□□□□□ -0.79
LRRTM1-202ENST00000409148 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
LRRTM1-202ENST00000409148 H3BPC8 53 aa10.09□□□□□ -0.79
LRRTM1-202ENST00000409148 A0A087X002 238 aa10.09□□□□□ -0.79
LRRTM1-202ENST00000409148 H0Y9P7 68 aa10.08□□□□□ -0.8
LRRTM1-202ENST00000409148 SACSQ9NZJ4 4579 aa10.07□□□□□ -0.8
LRRTM1-202ENST00000409148 CHKB-CPT1BH3BT56 60 aa10.07□□□□□ -0.8
LRRTM1-202ENST00000409148 KRTAP13-2Q52LG2 175 aa10.06□□□□□ -0.8
LRRTM1-202ENST00000409148 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
LRRTM1-202ENST00000409148 TP53AIP1Q9HCN2 124 aa10.05□□□□□ -0.8
LRRTM1-202ENST00000409148 LRP1BQ9NZR2 4599 aa10.05□□□□□ -0.8
LRRTM1-202ENST00000409148 KRTAP1-4P0C5Y4 121 aa10.03□□□□□ -0.8
LRRTM1-202ENST00000409148 KTN1-AS1Q86SY8 53 aa10.03□□□□□ -0.8
LRRTM1-202ENST00000409148 PRR15LQ9BU68 103 aa10.03□□□□□ -0.8
LRRTM1-202ENST00000409148 Q75L30 129 aa10.01□□□□□ -0.81
LRRTM1-202ENST00000409148 MRPL34Q9BQ48 92 aaKnown RBP10.01□□□□□ -0.81
LRRTM1-202ENST00000409148 LOC101927531A0A1B0GV80 90 aa10.01□□□□□ -0.81
LRRTM1-202ENST00000409148 ATP11AUNQ6ZP68 121 aa10□□□□□ -0.81
LRRTM1-202ENST00000409148 LCA10Q71F78 164 aa10□□□□□ -0.81
LRRTM1-202ENST00000409148 NDUFS5O43920 106 aa9.98□□□□□ -0.81
LRRTM1-202ENST00000409148 A0A1B0GVY2 172 aa9.97□□□□□ -0.81
LRRTM1-202ENST00000409148 PLA2G1BP04054 148 aaKnown RBP9.97□□□□□ -0.81
LRRTM1-202ENST00000409148 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
LRRTM1-202ENST00000409148 RYR2Q92736 4967 aa9.97□□□□□ -0.81
LRRTM1-202ENST00000409148 C8orf87E5RJ46 101 aa9.96□□□□□ -0.82
LRRTM1-202ENST00000409148 KMT2CQ8NEZ4 4911 aaKnown RBP9.95□□□□□ -0.82
LRRTM1-202ENST00000409148 COA5Q86WW8 74 aa9.94□□□□□ -0.82
LRRTM1-202ENST00000409148 IGLV7-46A0A075B6I9 117 aa9.94□□□□□ -0.82
LRRTM1-202ENST00000409148 A6NN06 94 aa9.94□□□□□ -0.82
LRRTM1-202ENST00000409148 SPTSSBQ8NFR3 76 aa9.94□□□□□ -0.82
LRRTM1-202ENST00000409148 RBM12B-AS1Q9P1G2 102 aa9.93□□□□□ -0.82
LRRTM1-202ENST00000409148 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
LRRTM1-202ENST00000409148 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
LRRTM1-202ENST00000409148 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
LRRTM1-202ENST00000409148 A6NED7 52 aa9.91□□□□□ -0.82
LRRTM1-202ENST00000409148 CDC42SE1Q9NRR8 79 aa9.9□□□□□ -0.82
LRRTM1-202ENST00000409148 PKHD1P08F94 4074 aa9.88□□□□□ -0.83
LRRTM1-202ENST00000409148 SPINK1P00995 79 aa9.87□□□□□ -0.83
LRRTM1-202ENST00000409148 SMR3BP02814 79 aaPredicted RBP9.87□□□□□ -0.83
LRRTM1-202ENST00000409148 LINC00313P59037 77 aa9.87□□□□□ -0.83
LRRTM1-202ENST00000409148 LINC01558Q9Y6Z2 57 aa9.86□□□□□ -0.83
LRRTM1-202ENST00000409148 DYNC1H1Q14204 4646 aaKnown RBP9.83□□□□□ -0.84
LRRTM1-202ENST00000409148 PRR26Q8N8Z3 221 aa9.81□□□□□ -0.84
LRRTM1-202ENST00000409148 LINC00304Q8N9R0 145 aa9.8□□□□□ -0.84
LRRTM1-202ENST00000409148 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
LRRTM1-202ENST00000409148 SPAG11AQ6PDA7 123 aa9.79□□□□□ -0.84
LRRTM1-202ENST00000409148 PCOTHQ58A44 107 aa9.79□□□□□ -0.84
LRRTM1-202ENST00000409148 C7orf65Q6ZTY9 151 aa9.79□□□□□ -0.84
LRRTM1-202ENST00000409148 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
LRRTM1-202ENST00000409148 Q5W150 140 aa9.77□□□□□ -0.85
LRRTM1-202ENST00000409148 KRTAP10-4P60372 401 aaPredicted RBP9.76□□□□□ -0.85
LRRTM1-202ENST00000409148 RYR3Q15413 4870 aa9.76□□□□□ -0.85
LRRTM1-202ENST00000409148 FAM229AH3BQW9 127 aa9.74□□□□□ -0.85
LRRTM1-202ENST00000409148 KRTAP16-1A8MUX0 517 aa9.73□□□□□ -0.85
LRRTM1-202ENST00000409148 APOBP04114 4563 aaKnown RBP9.72□□□□□ -0.85
LRRTM1-202ENST00000409148 SPINK7P58062 85 aa9.72□□□□□ -0.85
LRRTM1-202ENST00000409148 HRES1P13985 223 aa9.7□□□□□ -0.86
LRRTM1-202ENST00000409148 RETNLBQ9BQ08 111 aa9.62□□□□□ -0.87
LRRTM1-202ENST00000409148 FAT1Q14517 4588 aa9.61□□□□□ -0.87
LRRTM1-202ENST00000409148 IGKV2-30P06310 120 aa9.6□□□□□ -0.87
LRRTM1-202ENST00000409148 PKHD1L1Q86WI1 4243 aa9.54□□□□□ -0.88
LRRTM1-202ENST00000409148 Q5VSD8 79 aa9.5□□□□□ -0.89
LRRTM1-202ENST00000409148 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
LRRTM1-202ENST00000409148 ACYP2P14621 99 aa9.49□□□□□ -0.89
LRRTM1-202ENST00000409148 DMAC1Q96GE9 116 aa9.47□□□□□ -0.89
LRRTM1-202ENST00000409148 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
LRRTM1-202ENST00000409148 PRAC1Q96KF2 57 aa9.46□□□□□ -0.9
LRRTM1-202ENST00000409148 C20orf166-AS1Q96NR2 134 aa9.43□□□□□ -0.9
LRRTM1-202ENST00000409148 A8MUU9 505 aa9.43□□□□□ -0.9
LRRTM1-202ENST00000409148 EPPK1P58107 5090 aaKnown RBP9.41□□□□□ -0.9
LRRTM1-202ENST00000409148 KRTAP10-8P60410 259 aa9.41□□□□□ -0.9
LRRTM1-202ENST00000409148 ADM2Q7Z4H4 148 aa9.41□□□□□ -0.9
LRRTM1-202ENST00000409148 Q8N1X5 172 aa9.41□□□□□ -0.9
LRRTM1-202ENST00000409148 SPATA8Q6RVD6 105 aa9.39□□□□□ -0.91
LRRTM1-202ENST00000409148 HSPG2P98160 4391 aa9.37□□□□□ -0.91
LRRTM1-202ENST00000409148 FLG2Q5D862 2391 aaPredicted RBP9.36□□□□□ -0.91
LRRTM1-202ENST00000409148 LINC01554Q52M75 96 aa9.36□□□□□ -0.91
LRRTM1-202ENST00000409148 RYR1P21817 5038 aa9.35□□□□□ -0.91
LRRTM1-202ENST00000409148 A0A1B0GU69 56 aa9.34□□□□□ -0.91
LRRTM1-202ENST00000409148 KIAA1109Q2LD37 5005 aa9.3□□□□□ -0.92
LRRTM1-202ENST00000409148 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
LRRTM1-202ENST00000409148 TNXBP22105 4242 aa9.28□□□□□ -0.92
LRRTM1-202ENST00000409148 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
LRRTM1-202ENST00000409148 UQCR11O14957 56 aa9.25□□□□□ -0.93
LRRTM1-202ENST00000409148 LRP1Q07954 4544 aaKnown RBP9.25□□□□□ -0.93
LRRTM1-202ENST00000409148 FAT3Q8TDW7 4589 aa9.23□□□□□ -0.93
LRRTM1-202ENST00000409148 MT1HL1P0DM35 61 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms