RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 PRKDCP78527 4128 aaKnown RBP3.63□□□□□ -1.83
HDAC9-203ENST00000406072 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
HDAC9-203ENST00000406072 LINC00472Q9H8W2 130 aa3.62□□□□□ -1.83
HDAC9-203ENST00000406072 TEP1Q99973 2627 aaKnown RBP3.62□□□□□ -1.83
HDAC9-203ENST00000406072 KRTAP29-1A8MX34 341 aaPredicted RBP3.62□□□□□ -1.83
HDAC9-203ENST00000406072 CASC10Q5T4H9 136 aa3.62□□□□□ -1.83
HDAC9-203ENST00000406072 Q8N1X5 172 aa3.62□□□□□ -1.83
HDAC9-203ENST00000406072 APLNQ9ULZ1 77 aa3.62□□□□□ -1.83
HDAC9-203ENST00000406072 FBN1P35555 2871 aaKnown RBP3.62□□□□□ -1.83
HDAC9-203ENST00000406072 TRRAPQ9Y4A5 3859 aa3.62□□□□□ -1.83
HDAC9-203ENST00000406072 IGLV5-37A0A075B6J1 123 aa3.61□□□□□ -1.83
HDAC9-203ENST00000406072 Q96NJ1 140 aa3.61□□□□□ -1.83
HDAC9-203ENST00000406072 SPRR1AP35321 89 aa3.6□□□□□ -1.83
HDAC9-203ENST00000406072 A0A1B0GU33 70 aa3.6□□□□□ -1.83
HDAC9-203ENST00000406072 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
HDAC9-203ENST00000406072 SETXQ7Z333 2677 aaKnown RBP3.59□□□□□ -1.83
HDAC9-203ENST00000406072 A0A0D9SG42 100 aa3.59□□□□□ -1.83
HDAC9-203ENST00000406072 STAB2Q8WWQ8 2551 aa3.59□□□□□ -1.84
HDAC9-203ENST00000406072 IGLV5-52A0A0A0MRZ9 124 aa3.59□□□□□ -1.84
HDAC9-203ENST00000406072 DMAC1Q96GE9 116 aa3.58□□□□□ -1.84
HDAC9-203ENST00000406072 NUPR2A6NF83 97 aa3.58□□□□□ -1.84
HDAC9-203ENST00000406072 NF1P21359 2839 aa3.57□□□□□ -1.84
HDAC9-203ENST00000406072 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
HDAC9-203ENST00000406072 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
HDAC9-203ENST00000406072 Q6ZR54 194 aa3.57□□□□□ -1.84
HDAC9-203ENST00000406072 KRTAP26-1Q6PEX3 210 aa3.57□□□□□ -1.84
HDAC9-203ENST00000406072 LY6G6CO95867 125 aa3.56□□□□□ -1.84
HDAC9-203ENST00000406072 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
HDAC9-203ENST00000406072 ROMO1P60602 79 aa3.55□□□□□ -1.84
HDAC9-203ENST00000406072 KRTAP25-1Q3LHN0 102 aa3.54□□□□□ -1.84
HDAC9-203ENST00000406072 ZNF861PO60384 105 aa3.54□□□□□ -1.84
HDAC9-203ENST00000406072 Q5W150 140 aa3.54□□□□□ -1.84
HDAC9-203ENST00000406072 TENM1Q9UKZ4 2725 aa3.54□□□□□ -1.84
HDAC9-203ENST00000406072 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
HDAC9-203ENST00000406072 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
HDAC9-203ENST00000406072 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
HDAC9-203ENST00000406072 DNHD1Q96M86 4753 aa3.52□□□□□ -1.85
HDAC9-203ENST00000406072 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
HDAC9-203ENST00000406072 SPRR1BP22528 89 aa3.51□□□□□ -1.85
HDAC9-203ENST00000406072 PSORS1C2Q9UIG4 136 aa3.51□□□□□ -1.85
HDAC9-203ENST00000406072 LYSTQ99698 3801 aa3.51□□□□□ -1.85
HDAC9-203ENST00000406072 DNAH2Q9P225 4427 aa3.5□□□□□ -1.85
HDAC9-203ENST00000406072 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
HDAC9-203ENST00000406072 TYMSOSQ8TAI1 123 aa3.5□□□□□ -1.85
HDAC9-203ENST00000406072 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
HDAC9-203ENST00000406072 DNAH10Q8IVF4 4471 aa3.49□□□□□ -1.85
HDAC9-203ENST00000406072 NBDYA0A0U1RRE5 68 aa3.49□□□□□ -1.85
HDAC9-203ENST00000406072 VWFP04275 2813 aa3.49□□□□□ -1.85
HDAC9-203ENST00000406072 A0A087X002 238 aa3.48□□□□□ -1.85
HDAC9-203ENST00000406072 NOTCH2NLQ7Z3S9 236 aa3.48□□□□□ -1.85
HDAC9-203ENST00000406072 PLECQ15149 4684 aaKnown RBP3.48□□□□□ -1.85
HDAC9-203ENST00000406072 NIPBLQ6KC79 2804 aaeCLIP3.48□□□□□ -1.85
HDAC9-203ENST00000406072 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
HDAC9-203ENST00000406072 Q6ZRN7 208 aaPredicted RBP3.48□□□□□ -1.85
HDAC9-203ENST00000406072 STARD9Q9P2P6 4700 aa3.48□□□□□ -1.85
HDAC9-203ENST00000406072 C9orf92A6NGG3 77 aa3.47□□□□□ -1.85
HDAC9-203ENST00000406072 A8MUU9 505 aa3.45□□□□□ -1.86
HDAC9-203ENST00000406072 RPL37P61927 97 aaKnown RBP3.45□□□□□ -1.86
HDAC9-203ENST00000406072 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
HDAC9-203ENST00000406072 H1FX-AS1Q4G0G2 97 aa3.44□□□□□ -1.86
HDAC9-203ENST00000406072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.43□□□□□ -1.86
HDAC9-203ENST00000406072 PLAC8Q9NZF1 115 aa3.42□□□□□ -1.86
HDAC9-203ENST00000406072 PKHD1L1Q86WI1 4243 aa3.42□□□□□ -1.86
HDAC9-203ENST00000406072 KRTAP1-5Q9BYS1 174 aa3.42□□□□□ -1.86
HDAC9-203ENST00000406072 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
HDAC9-203ENST00000406072 PANO1I0J062 215 aa3.41□□□□□ -1.86
HDAC9-203ENST00000406072 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
HDAC9-203ENST00000406072 KRTAP7-1Q8IUC3 87 aa3.41□□□□□ -1.86
HDAC9-203ENST00000406072 A0A087WTM6 91 aa3.4□□□□□ -1.86
HDAC9-203ENST00000406072 LINC00483Q53H64 154 aa3.4□□□□□ -1.86
HDAC9-203ENST00000406072 LINC00304Q8N9R0 145 aa3.4□□□□□ -1.86
HDAC9-203ENST00000406072 C20orf166-AS1Q96NR2 134 aa3.4□□□□□ -1.86
HDAC9-203ENST00000406072 MEGF8Q7Z7M0 2845 aa3.39□□□□□ -1.87
HDAC9-203ENST00000406072 KRTAP11-1Q8IUC1 163 aa3.39□□□□□ -1.87
HDAC9-203ENST00000406072 PKD1L1Q8TDX9 2849 aa3.39□□□□□ -1.87
HDAC9-203ENST00000406072 PKD1P98161 4303 aa3.39□□□□□ -1.87
HDAC9-203ENST00000406072 HECTD4Q9Y4D8 3996 aa3.39□□□□□ -1.87
HDAC9-203ENST00000406072 COL7A1Q02388 2944 aa3.37□□□□□ -1.87
HDAC9-203ENST00000406072 SACSQ9NZJ4 4579 aa3.36□□□□□ -1.87
HDAC9-203ENST00000406072 Q6ZSA8 131 aa3.35□□□□□ -1.87
HDAC9-203ENST00000406072 DNAH5Q8TE73 4624 aa3.35□□□□□ -1.87
HDAC9-203ENST00000406072 DYNC1H1Q14204 4646 aaKnown RBP3.34□□□□□ -1.87
HDAC9-203ENST00000406072 RYR2Q92736 4967 aa3.34□□□□□ -1.88
HDAC9-203ENST00000406072 A0A1B0GVY2 172 aa3.34□□□□□ -1.88
HDAC9-203ENST00000406072 PKHD1P08F94 4074 aa3.33□□□□□ -1.88
HDAC9-203ENST00000406072 TENM3Q9P273 2699 aa3.33□□□□□ -1.88
HDAC9-203ENST00000406072 SMR3BP02814 79 aaPredicted RBP3.33□□□□□ -1.88
HDAC9-203ENST00000406072 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
HDAC9-203ENST00000406072 KRTAP13-1Q8IUC0 172 aa3.31□□□□□ -1.88
HDAC9-203ENST00000406072 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
HDAC9-203ENST00000406072 C10orf95Q9H7T3 257 aa3.3□□□□□ -1.88
HDAC9-203ENST00000406072 HYDINQ4G0P3 5121 aa3.3□□□□□ -1.88
HDAC9-203ENST00000406072 KRTAP23-1A1A580 65 aa3.3□□□□□ -1.88
HDAC9-203ENST00000406072 H0YAA0 97 aa3.3□□□□□ -1.88
HDAC9-203ENST00000406072 COX6B2Q6YFQ2 88 aa3.3□□□□□ -1.88
HDAC9-203ENST00000406072 FBN3Q75N90 2809 aa3.29□□□□□ -1.88
HDAC9-203ENST00000406072 VPS13BQ7Z7G8 4022 aa3.29□□□□□ -1.88
HDAC9-203ENST00000406072 TGP01266 2768 aa3.27□□□□□ -1.89
HDAC9-203ENST00000406072 S4R3F8 94 aa3.26□□□□□ -1.89
HDAC9-203ENST00000406072 KRTAP3-3Q9BYR6 98 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms