RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 A8MWP4 228 aa9.62□□□□□ -0.87
IRF1-202ENST00000405885 Q5XG85 94 aa9.62□□□□□ -0.87
IRF1-202ENST00000405885 DMBT1Q9UGM3 2413 aaPredicted RBP9.6□□□□□ -0.87
IRF1-202ENST00000405885 ASB16-AS1Q495Z4 193 aa9.6□□□□□ -0.87
IRF1-202ENST00000405885 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
IRF1-202ENST00000405885 PRR15Q8IV56 129 aa9.59□□□□□ -0.87
IRF1-202ENST00000405885 J3KT08 172 aa9.59□□□□□ -0.87
IRF1-202ENST00000405885 SPAG11AQ6PDA7 123 aa9.59□□□□□ -0.87
IRF1-202ENST00000405885 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
IRF1-202ENST00000405885 IGHV6-1A0A0B4J1U7 121 aa9.56□□□□□ -0.88
IRF1-202ENST00000405885 NOTCH2NLQ7Z3S9 236 aa9.56□□□□□ -0.88
IRF1-202ENST00000405885 RPS28P62857 69 aaKnown RBP9.55□□□□□ -0.88
IRF1-202ENST00000405885 RETNLBQ9BQ08 111 aa9.55□□□□□ -0.88
IRF1-202ENST00000405885 CYSTM1Q9H1C7 97 aa9.55□□□□□ -0.88
IRF1-202ENST00000405885 WFDC13Q8IUB5 93 aa9.54□□□□□ -0.88
IRF1-202ENST00000405885 RPS29P62273 56 aaKnown RBP9.54□□□□□ -0.88
IRF1-202ENST00000405885 NDUFB1O75438 58 aa9.53□□□□□ -0.88
IRF1-202ENST00000405885 A0A1B0GVX0 72 aa9.52□□□□□ -0.88
IRF1-202ENST00000405885 HCG22E2RYF7 251 aa9.52□□□□□ -0.88
IRF1-202ENST00000405885 TMEM258P61165 79 aa9.52□□□□□ -0.88
IRF1-202ENST00000405885 MMP24-AS1A0A0U1RRL7 71 aa9.5□□□□□ -0.89
IRF1-202ENST00000405885 C8orf17Q9NRJ1 99 aa9.47□□□□□ -0.89
IRF1-202ENST00000405885 KRTAP29-1A8MX34 341 aaPredicted RBP9.47□□□□□ -0.89
IRF1-202ENST00000405885 CASC2Q6XLA1 102 aa9.46□□□□□ -0.89
IRF1-202ENST00000405885 PCLOQ9Y6V0 5065 aa9.46□□□□□ -0.9
IRF1-202ENST00000405885 TRAV7A0A075B6U4 112 aa9.43□□□□□ -0.9
IRF1-202ENST00000405885 hDV103S1A0JD37 113 aa9.43□□□□□ -0.9
IRF1-202ENST00000405885 OXTP01178 125 aa9.42□□□□□ -0.9
IRF1-202ENST00000405885 OCR1Q9BZK8 76 aa9.4□□□□□ -0.91
IRF1-202ENST00000405885 LINC00313P59037 77 aa9.39□□□□□ -0.91
IRF1-202ENST00000405885 C20orf197Q8N268 126 aa9.36□□□□□ -0.91
IRF1-202ENST00000405885 KLKP1Q107X0 134 aa9.36□□□□□ -0.91
IRF1-202ENST00000405885 C9orf92A6NGG3 77 aa9.35□□□□□ -0.91
IRF1-202ENST00000405885 MRPL34Q9BQ48 92 aaKnown RBP9.35□□□□□ -0.91
IRF1-202ENST00000405885 KRTAP16-1A8MUX0 517 aa9.33□□□□□ -0.92
IRF1-202ENST00000405885 C8orf87E5RJ46 101 aa9.33□□□□□ -0.92
IRF1-202ENST00000405885 H7BZZ5 65 aa9.33□□□□□ -0.92
IRF1-202ENST00000405885 NDUFS5O43920 106 aa9.32□□□□□ -0.92
IRF1-202ENST00000405885 TMEM254Q8TBM7 123 aa9.32□□□□□ -0.92
IRF1-202ENST00000405885 J3QL48 77 aa9.28□□□□□ -0.92
IRF1-202ENST00000405885 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
IRF1-202ENST00000405885 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
IRF1-202ENST00000405885 LPAP08519 4548 aa9.27□□□□□ -0.92
IRF1-202ENST00000405885 NDUFC1O43677 76 aa9.25□□□□□ -0.93
IRF1-202ENST00000405885 HERC1Q15751 4861 aa9.25□□□□□ -0.93
IRF1-202ENST00000405885 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
IRF1-202ENST00000405885 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
IRF1-202ENST00000405885 PRR4Q16378 134 aa9.24□□□□□ -0.93
IRF1-202ENST00000405885 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
IRF1-202ENST00000405885 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
IRF1-202ENST00000405885 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
IRF1-202ENST00000405885 Q5W150 140 aa9.22□□□□□ -0.93
IRF1-202ENST00000405885 FP248Q71RG6 208 aaPredicted RBP9.22□□□□□ -0.93
IRF1-202ENST00000405885 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
IRF1-202ENST00000405885 TP53AIP1Q9HCN2 124 aa9.18□□□□□ -0.94
IRF1-202ENST00000405885 H0Y9P7 68 aa9.17□□□□□ -0.94
IRF1-202ENST00000405885 TRAV22A0A0B4J277 110 aa9.17□□□□□ -0.94
IRF1-202ENST00000405885 KRTAP13-3Q3SY46 172 aa9.17□□□□□ -0.94
IRF1-202ENST00000405885 LRP2P98164 4655 aa9.16□□□□□ -0.94
IRF1-202ENST00000405885 A0A0U1RQV1 116 aa9.14□□□□□ -0.95
IRF1-202ENST00000405885 C4orf26Q17RF5 130 aa9.14□□□□□ -0.95
IRF1-202ENST00000405885 LINC00208Q96KT6 92 aa9.14□□□□□ -0.95
IRF1-202ENST00000405885 C20orf166-AS1Q96NR2 134 aa9.13□□□□□ -0.95
IRF1-202ENST00000405885 MP68P56378 58 aa9.12□□□□□ -0.95
IRF1-202ENST00000405885 A8MUU9 505 aa9.11□□□□□ -0.95
IRF1-202ENST00000405885 XP32Q5T750 250 aa9.1□□□□□ -0.95
IRF1-202ENST00000405885 C1orf64Q8NEQ6 169 aa9.09□□□□□ -0.95
IRF1-202ENST00000405885 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
IRF1-202ENST00000405885 ZCCHC13Q8WW36 166 aaKnown RBP9.08□□□□□ -0.96
IRF1-202ENST00000405885 TPRXLQ17RH7 258 aa9.04□□□□□ -0.96
IRF1-202ENST00000405885 Q75L30 129 aa9.04□□□□□ -0.96
IRF1-202ENST00000405885 HMCN2Q8NDA2 5059 aa9.01□□□□□ -0.97
IRF1-202ENST00000405885 RPL37P61927 97 aaKnown RBP9□□□□□ -0.97
IRF1-202ENST00000405885 H3BPC8 53 aa8.99□□□□□ -0.97
IRF1-202ENST00000405885 PCOTHQ58A44 107 aa8.99□□□□□ -0.97
IRF1-202ENST00000405885 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
IRF1-202ENST00000405885 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
IRF1-202ENST00000405885 CYP4F30PQ9H0H9 118 aa8.96□□□□□ -0.97
IRF1-202ENST00000405885 LOC101927531A0A1B0GV80 90 aa8.95□□□□□ -0.98
IRF1-202ENST00000405885 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
IRF1-202ENST00000405885 PRO0628Q9UI54 55 aa8.87□□□□□ -0.99
IRF1-202ENST00000405885 SPINK7P58062 85 aa8.87□□□□□ -0.99
IRF1-202ENST00000405885 C7orf65Q6ZTY9 151 aa8.86□□□□□ -0.99
IRF1-202ENST00000405885 MUC2Q02817 5179 aa8.85□□□□□ -0.99
IRF1-202ENST00000405885 HRES1P13985 223 aa8.84□□□□□ -0.99
IRF1-202ENST00000405885 MPLKIPQ8TAP9 179 aa8.79□□□□□ -1
IRF1-202ENST00000405885 Q1T7F1 81 aa8.77□□□□□ -1
IRF1-202ENST00000405885 SPANXA2-OT1Q8N9U9 137 aa8.76□□□□□ -1.01
IRF1-202ENST00000405885 UBR4Q5T4S7 5183 aa8.75□□□□□ -1.01
IRF1-202ENST00000405885 MUC17Q685J3 4493 aa8.73□□□□□ -1.01
IRF1-202ENST00000405885 SEC61BP60468 96 aaKnown RBP8.71□□□□□ -1.02
IRF1-202ENST00000405885 KRTAP4-1Q9BYQ7 146 aa8.7□□□□□ -1.02
IRF1-202ENST00000405885 BRK1Q8WUW1 75 aa8.69□□□□□ -1.02
IRF1-202ENST00000405885 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
IRF1-202ENST00000405885 DMAC1Q96GE9 116 aa8.65□□□□□ -1.03
IRF1-202ENST00000405885 V9GYY9 64 aa8.63□□□□□ -1.03
IRF1-202ENST00000405885 RNF213Q63HN8 5207 aa8.63□□□□□ -1.03
IRF1-202ENST00000405885 COA5Q86WW8 74 aa8.58□□□□□ -1.04
IRF1-202ENST00000405885 COX6B2Q6YFQ2 88 aa8.58□□□□□ -1.04
IRF1-202ENST00000405885 ACYP2P14621 99 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms