RNA–Protein interactions for RNA: ENST00000404989.1

PARVB-203, Transcript of parvin beta, humanhuman

TSL 1 (best) BASIC

Gene PARVB, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-203ENST00000404989 A0A0U1RQV1 116 aa9.41□□□□□ -0.9
PARVB-203ENST00000404989 SNURFQ9Y675 71 aa9.41□□□□□ -0.9
PARVB-203ENST00000404989 IGHV6-1A0A0B4J1U7 121 aa9.41□□□□□ -0.9
PARVB-203ENST00000404989 SPINK1P00995 79 aa9.39□□□□□ -0.91
PARVB-203ENST00000404989 C8orf87E5RJ46 101 aa9.38□□□□□ -0.91
PARVB-203ENST00000404989 H7BZZ5 65 aa9.37□□□□□ -0.91
PARVB-203ENST00000404989 MP68P56378 58 aa9.37□□□□□ -0.91
PARVB-203ENST00000404989 SPAG11AQ6PDA7 123 aa9.37□□□□□ -0.91
PARVB-203ENST00000404989 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
PARVB-203ENST00000404989 H3BPC8 53 aa9.36□□□□□ -0.91
PARVB-203ENST00000404989 RPS29P62273 56 aaKnown RBP9.36□□□□□ -0.91
PARVB-203ENST00000404989 PKHD1L1Q86WI1 4243 aa9.35□□□□□ -0.91
PARVB-203ENST00000404989 PRR26Q8N8Z3 221 aa9.34□□□□□ -0.91
PARVB-203ENST00000404989 MRPL34Q9BQ48 92 aaKnown RBP9.34□□□□□ -0.91
PARVB-203ENST00000404989 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
PARVB-203ENST00000404989 C1orf195Q5TG92 126 aa9.33□□□□□ -0.92
PARVB-203ENST00000404989 LINC00304Q8N9R0 145 aa9.33□□□□□ -0.92
PARVB-203ENST00000404989 FAM236DA0A1B0GTK5 79 aa9.32□□□□□ -0.92
PARVB-203ENST00000404989 FAM236CP0DP71 79 aa9.32□□□□□ -0.92
PARVB-203ENST00000404989 ATP5EP56381 51 aaPredicted RBP9.32□□□□□ -0.92
PARVB-203ENST00000404989 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
PARVB-203ENST00000404989 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
PARVB-203ENST00000404989 H0Y9P7 68 aa9.29□□□□□ -0.92
PARVB-203ENST00000404989 HSPG2P98160 4391 aa9.28□□□□□ -0.92
PARVB-203ENST00000404989 TRAV22A0A0B4J277 110 aa9.28□□□□□ -0.92
PARVB-203ENST00000404989 NDUFS5O43920 106 aa9.27□□□□□ -0.93
PARVB-203ENST00000404989 LINC00313P59037 77 aa9.27□□□□□ -0.93
PARVB-203ENST00000404989 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.93
PARVB-203ENST00000404989 RYR1P21817 5038 aa9.26□□□□□ -0.93
PARVB-203ENST00000404989 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
PARVB-203ENST00000404989 KRTAP17-1Q9BYP8 105 aa9.23□□□□□ -0.93
PARVB-203ENST00000404989 C1orf64Q8NEQ6 169 aa9.2□□□□□ -0.94
PARVB-203ENST00000404989 Q5VSD8 79 aa9.2□□□□□ -0.94
PARVB-203ENST00000404989 SERP1Q9Y6X1 66 aa9.18□□□□□ -0.94
PARVB-203ENST00000404989 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
PARVB-203ENST00000404989 SPANXA2-OT1Q8N9U9 137 aa9.12□□□□□ -0.95
PARVB-203ENST00000404989 KRTAP16-1A8MUX0 517 aa9.12□□□□□ -0.95
PARVB-203ENST00000404989 EPPK1P58107 5090 aaKnown RBP9.11□□□□□ -0.95
PARVB-203ENST00000404989 LOC101927531A0A1B0GV80 90 aa9.11□□□□□ -0.95
PARVB-203ENST00000404989 KRTAP10-8P60410 259 aa9.1□□□□□ -0.95
PARVB-203ENST00000404989 KIAA1109Q2LD37 5005 aa9.1□□□□□ -0.95
PARVB-203ENST00000404989 CYP4F30PQ9H0H9 118 aa9.09□□□□□ -0.95
PARVB-203ENST00000404989 TNXBP22105 4242 aa9.08□□□□□ -0.96
PARVB-203ENST00000404989 LRP1Q07954 4544 aaKnown RBP9.07□□□□□ -0.96
PARVB-203ENST00000404989 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
PARVB-203ENST00000404989 KRTAP13-3Q3SY46 172 aa9.06□□□□□ -0.96
PARVB-203ENST00000404989 Q5W150 140 aa9.06□□□□□ -0.96
PARVB-203ENST00000404989 Q8N1X5 172 aa9.06□□□□□ -0.96
PARVB-203ENST00000404989 IGLV7-46A0A075B6I9 117 aa9.01□□□□□ -0.97
PARVB-203ENST00000404989 OXTP01178 125 aa9.01□□□□□ -0.97
PARVB-203ENST00000404989 PCOTHQ58A44 107 aa9□□□□□ -0.97
PARVB-203ENST00000404989 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
PARVB-203ENST00000404989 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
PARVB-203ENST00000404989 RETNLBQ9BQ08 111 aa8.97□□□□□ -0.97
PARVB-203ENST00000404989 PRR4Q16378 134 aa8.96□□□□□ -0.97
PARVB-203ENST00000404989 IGKV2-30P06310 120 aa8.95□□□□□ -0.98
PARVB-203ENST00000404989 FP248Q71RG6 208 aaPredicted RBP8.94□□□□□ -0.98
PARVB-203ENST00000404989 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
PARVB-203ENST00000404989 C20orf166-AS1Q96NR2 134 aa8.91□□□□□ -0.98
PARVB-203ENST00000404989 A8MUU9 505 aa8.9□□□□□ -0.98
PARVB-203ENST00000404989 C9orf92A6NGG3 77 aa8.9□□□□□ -0.99
PARVB-203ENST00000404989 KRTAP4-5Q9BYR2 181 aa8.86□□□□□ -0.99
PARVB-203ENST00000404989 IGKV2D-30A0A075B6S6 120 aa8.83□□□□□ -1
PARVB-203ENST00000404989 HRES1P13985 223 aa8.83□□□□□ -1
PARVB-203ENST00000404989 C7orf65Q6ZTY9 151 aa8.82□□□□□ -1
PARVB-203ENST00000404989 Q75L30 129 aa8.82□□□□□ -1
PARVB-203ENST00000404989 BIRC6Q9NR09 4857 aa8.81□□□□□ -1
PARVB-203ENST00000404989 COA5Q86WW8 74 aa8.81□□□□□ -1
PARVB-203ENST00000404989 MYCBP2O75592 4640 aa8.8□□□□□ -1
PARVB-203ENST00000404989 ACYP2P14621 99 aa8.79□□□□□ -1
PARVB-203ENST00000404989 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
PARVB-203ENST00000404989 V9GYY9 64 aa8.76□□□□□ -1.01
PARVB-203ENST00000404989 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
PARVB-203ENST00000404989 Q1T7F1 81 aa8.73□□□□□ -1.01
PARVB-203ENST00000404989 MPLKIPQ8TAP9 179 aa8.73□□□□□ -1.01
PARVB-203ENST00000404989 C4orf26Q17RF5 130 aa8.71□□□□□ -1.02
PARVB-203ENST00000404989 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
PARVB-203ENST00000404989 A8MUN3 132 aa8.67□□□□□ -1.02
PARVB-203ENST00000404989 HERC2O95714 4834 aa8.67□□□□□ -1.02
PARVB-203ENST00000404989 RPL37P61927 97 aaKnown RBP8.67□□□□□ -1.02
PARVB-203ENST00000404989 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
PARVB-203ENST00000404989 XP32Q5T750 250 aa8.65□□□□□ -1.03
PARVB-203ENST00000404989 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
PARVB-203ENST00000404989 SPINK7P58062 85 aa8.64□□□□□ -1.03
PARVB-203ENST00000404989 TPRXLQ17RH7 258 aa8.6□□□□□ -1.03
PARVB-203ENST00000404989 LINC01558Q9Y6Z2 57 aa8.56□□□□□ -1.04
PARVB-203ENST00000404989 J3QL48 77 aa8.54□□□□□ -1.04
PARVB-203ENST00000404989 PSPHP1O15172 72 aa8.51□□□□□ -1.05
PARVB-203ENST00000404989 PRR15LQ9BU68 103 aa8.49□□□□□ -1.05
PARVB-203ENST00000404989 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
PARVB-203ENST00000404989 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
PARVB-203ENST00000404989 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
PARVB-203ENST00000404989 Q5VV11 94 aa8.44□□□□□ -1.06
PARVB-203ENST00000404989 LPAP08519 4548 aa8.44□□□□□ -1.06
PARVB-203ENST00000404989 LRP2P98164 4655 aa8.42□□□□□ -1.06
PARVB-203ENST00000404989 BRK1Q8WUW1 75 aa8.36□□□□□ -1.07
PARVB-203ENST00000404989 A0A1B0GU69 56 aa8.35□□□□□ -1.07
PARVB-203ENST00000404989 PCLOQ9Y6V0 5065 aa8.34□□□□□ -1.07
PARVB-203ENST00000404989 SEC61BP60468 96 aaKnown RBP8.34□□□□□ -1.07
PARVB-203ENST00000404989 PRO0628Q9UI54 55 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms