RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LAMA5O15230 3695 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 KNL1Q8NG31 2342 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 PLECQ15149 4684 aaKnown RBP0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 SPENQ96T58 3664 aaKnown RBP0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 AHCTF1Q8WYP5 2266 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 LCE6AA0A183 80 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 M0R2T5 61 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 NDUFA4O00483 81 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 UTRNP46939 3433 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 TNXBP22105 4242 aa0.19□□□□□ -2.38
HMGB1P17-201ENST00000403495 PKDREJQ9NTG1 2253 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 TIAM2Q8IVF5 1701 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 USF3Q68DE3 2245 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 PKHD1P08F94 4074 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 SPRR2DP22532 72 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 ARFGEF2Q9Y6D5 1785 aa0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 HRNRQ86YZ3 2850 aaPredicted RBP0.18□□□□□ -2.38
HMGB1P17-201ENST00000403495 CDH23Q9H251 3354 aa0.17□□□□□ -2.38
HMGB1P17-201ENST00000403495 NESP48681 1621 aa0.17□□□□□ -2.38
HMGB1P17-201ENST00000403495 KRTAP19-6Q3LI70 58 aa0.17□□□□□ -2.38
HMGB1P17-201ENST00000403495 XIRP2A4UGR9 3374 aa0.17□□□□□ -2.38
HMGB1P17-201ENST00000403495 CD163L1Q9NR16 1453 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 ANKRD50Q9ULJ7 1429 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 HMGA1P17096 107 aaKnown RBP0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 MT4P47944 62 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 PRO3102Q9H379 93 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 CFAP43Q8NDM7 1665 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 DNAH1Q9P2D7 4330 aa0.16□□□□□ -2.38
HMGB1P17-201ENST00000403495 H3BVH4 76 aa0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 DEFB135Q30KP9 77 aa0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 SMCO4Q9NRQ5 59 aa0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 AKAP9Q99996 3911 aa0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 GOLGB1Q14789 3259 aaKnown RBP0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 DMDP11532 3685 aa0.15□□□□□ -2.39
HMGB1P17-201ENST00000403495 AKAP6Q13023 2319 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 VPS13BQ7Z7G8 4022 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 C3orf79P0CE67 100 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 SPRR2EP22531 72 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 SPRR2BP35325 72 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 SPRR2AP35326 72 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 HSPG2P98160 4391 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 APOBP04114 4563 aaKnown RBP0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 DNAH5Q8TE73 4624 aa0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 GOLGA4Q13439 2230 aaKnown RBP0.14□□□□□ -2.39
HMGB1P17-201ENST00000403495 CMYA5Q8N3K9 4069 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 DNAH9Q9NYC9 4486 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 LMTK2Q8IWU2 1503 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 UGGT2Q9NYU1 1516 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 CICQ96RK0 1608 aaPredicted RBP0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 DNAH3Q8TD57 4116 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 LINC00158P58513 81 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 SPRR2GQ9BYE4 73 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 C4AP0C0L4 1744 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 C4BP0C0L5 1744 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 RICTORQ6R327 1708 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 TRRAPQ9Y4A5 3859 aa0.13□□□□□ -2.39
HMGB1P17-201ENST00000403495 PKHD1L1Q86WI1 4243 aa0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 PDCD5O14737 125 aa0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 DEFA5Q01523 94 aa0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 URB1O60287 2271 aaKnown RBP0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 EIF2AK4Q9P2K8 1649 aaKnown RBP0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 HFM1A2PYH4 1435 aa0.12□□□□□ -2.39
HMGB1P17-201ENST00000403495 DYNC2H1Q8NCM8 4307 aaKnown RBP0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 PLCH1Q4KWH8 1693 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 ADAMTS12P58397 1594 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 RALGAPBQ86X10 1494 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 FAT1Q14517 4588 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 SACSQ9NZJ4 4579 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 LRRIQ1Q96JM4 1722 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 H0YGG7 62 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 IQGAP3Q86VI3 1631 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 DUOX2Q9NRD8 1548 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 DNAH6Q9C0G6 4158 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 MUC17Q685J3 4493 aa0.11□□□□□ -2.39
HMGB1P17-201ENST00000403495 MYO5CQ9NQX4 1742 aa0.1□□□□□ -2.39
HMGB1P17-201ENST00000403495 PLXNC1O60486 1568 aa0.1□□□□□ -2.39
HMGB1P17-201ENST00000403495 FLGP20930 4061 aaPredicted RBP0.1□□□□□ -2.39
HMGB1P17-201ENST00000403495 SCN11AQ9UI33 1791 aa0.09□□□□□ -2.39
HMGB1P17-201ENST00000403495 DNAH10Q8IVF4 4471 aa0.09□□□□□ -2.39
HMGB1P17-201ENST00000403495 MRPL33O75394 65 aaKnown RBP0.09□□□□□ -2.4
HMGB1P17-201ENST00000403495 ENHOQ6UWT2 76 aa0.09□□□□□ -2.4
HMGB1P17-201ENST00000403495 UBL5Q9BZL1 73 aa0.09□□□□□ -2.4
HMGB1P17-201ENST00000403495 DEFB131BA0A096LNP1 70 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 H0YAA0 97 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 ATXN8Q156A1 80 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 HILPDAQ9Y5L2 63 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 DEPDC5O75140 1603 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 WIZO95785 1651 aa0.08□□□□□ -2.4
HMGB1P17-201ENST00000403495 DDX60LQ5H9U9 1706 aaKnown RBP0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 CDC42BPGQ6DT37 1551 aa0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 SMR3BP02814 79 aaPredicted RBP0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 KCNQ1DNQ9H478 68 aa0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 ANK3Q12955 4377 aaKnown RBP0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 DNAH17Q9UFH2 4485 aa0.07□□□□□ -2.4
HMGB1P17-201ENST00000403495 DIP2AQ14689 1571 aa0.06□□□□□ -2.4
HMGB1P17-201ENST00000403495 GNG13Q9P2W3 67 aa0.06□□□□□ -2.4
HMGB1P17-201ENST00000403495 THOC2Q8NI27 1593 aaKnown RBP0.06□□□□□ -2.4
HMGB1P17-201ENST00000403495 DNAH11Q96DT5 4516 aa0.05□□□□□ -2.4
HMGB1P17-201ENST00000403495 LYNX1G3V0Z9 82 aa0.05□□□□□ -2.4
HMGB1P17-201ENST00000403495 SPRR2FQ96RM1 72 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms