RNA–Protein interactions for RNA: ENST00000399132.5

COL25A1-203, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL25A1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-203ENST00000399132 PKHD1P08F94 4074 aa9.1□□□□□ -0.95
COL25A1-203ENST00000399132 ALMS1Q8TCU4 4167 aa9.1□□□□□ -0.95
COL25A1-203ENST00000399132 LIMD2Q9BT23 127 aa9.09□□□□□ -0.95
COL25A1-203ENST00000399132 SPRR1BP22528 89 aa9.09□□□□□ -0.95
COL25A1-203ENST00000399132 KRTAP21-3Q3LHN1 58 aa9.09□□□□□ -0.95
COL25A1-203ENST00000399132 KRTAP10-1P60331 282 aa9.08□□□□□ -0.96
COL25A1-203ENST00000399132 IGLV8-61A0A075B6I0 122 aa9.08□□□□□ -0.96
COL25A1-203ENST00000399132 MOBPQ13875 183 aa9.08□□□□□ -0.96
COL25A1-203ENST00000399132 SACSQ9NZJ4 4579 aa9.07□□□□□ -0.96
COL25A1-203ENST00000399132 ZNF861PO60384 105 aa9.07□□□□□ -0.96
COL25A1-203ENST00000399132 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
COL25A1-203ENST00000399132 A6NED7 52 aa9.05□□□□□ -0.96
COL25A1-203ENST00000399132 NDUFB1O75438 58 aa9.05□□□□□ -0.96
COL25A1-203ENST00000399132 WFDC13Q8IUB5 93 aa9.05□□□□□ -0.96
COL25A1-203ENST00000399132 Q75L30 129 aa9.04□□□□□ -0.96
COL25A1-203ENST00000399132 A0A1B0GW54 56 aa9.03□□□□□ -0.96
COL25A1-203ENST00000399132 LINC00208Q96KT6 92 aa9.03□□□□□ -0.96
COL25A1-203ENST00000399132 IGLV7-43P04211 117 aa9.02□□□□□ -0.97
COL25A1-203ENST00000399132 CDC42SE1Q9NRR8 79 aa9□□□□□ -0.97
COL25A1-203ENST00000399132 VPS13BQ7Z7G8 4022 aa8.99□□□□□ -0.97
COL25A1-203ENST00000399132 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
COL25A1-203ENST00000399132 ZNF706Q9Y5V0 76 aaPredicted RBP8.98□□□□□ -0.97
COL25A1-203ENST00000399132 LINC00483Q53H64 154 aa8.96□□□□□ -0.97
COL25A1-203ENST00000399132 KMT2CQ8NEZ4 4911 aaKnown RBP8.96□□□□□ -0.98
COL25A1-203ENST00000399132 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
COL25A1-203ENST00000399132 MP68P56378 58 aa8.94□□□□□ -0.98
COL25A1-203ENST00000399132 SPANXA2-OT1Q8N9U9 137 aa8.94□□□□□ -0.98
COL25A1-203ENST00000399132 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
COL25A1-203ENST00000399132 Q6ZSA8 131 aa8.9□□□□□ -0.98
COL25A1-203ENST00000399132 A0A087X002 238 aa8.89□□□□□ -0.99
COL25A1-203ENST00000399132 SMR3BP02814 79 aaPredicted RBP8.89□□□□□ -0.99
COL25A1-203ENST00000399132 LINC00313P59037 77 aa8.89□□□□□ -0.99
COL25A1-203ENST00000399132 A8MWP4 228 aa8.88□□□□□ -0.99
COL25A1-203ENST00000399132 CASC2Q6XLA1 102 aa8.88□□□□□ -0.99
COL25A1-203ENST00000399132 Q96NJ1 140 aa8.88□□□□□ -0.99
COL25A1-203ENST00000399132 COA5Q86WW8 74 aa8.87□□□□□ -0.99
COL25A1-203ENST00000399132 IGHV6-1A0A0B4J1U7 121 aa8.86□□□□□ -0.99
COL25A1-203ENST00000399132 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
COL25A1-203ENST00000399132 FAT1Q14517 4588 aa8.85□□□□□ -0.99
COL25A1-203ENST00000399132 PRAC1Q96KF2 57 aa8.85□□□□□ -0.99
COL25A1-203ENST00000399132 H0Y9P7 68 aa8.84□□□□□ -0.99
COL25A1-203ENST00000399132 SPINK7P58062 85 aa8.82□□□□□ -1
COL25A1-203ENST00000399132 NOTCH2NLQ7Z3S9 236 aa8.82□□□□□ -1
COL25A1-203ENST00000399132 RYR2Q92736 4967 aa8.81□□□□□ -1
COL25A1-203ENST00000399132 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
COL25A1-203ENST00000399132 KRTAP29-1A8MX34 341 aaPredicted RBP8.81□□□□□ -1
COL25A1-203ENST00000399132 LINC01558Q9Y6Z2 57 aa8.81□□□□□ -1
COL25A1-203ENST00000399132 MMP24-AS1A0A0U1RRL7 71 aa8.8□□□□□ -1
COL25A1-203ENST00000399132 CDK2AP2O75956 126 aa8.8□□□□□ -1
COL25A1-203ENST00000399132 H3BPC8 53 aa8.79□□□□□ -1
COL25A1-203ENST00000399132 SPAG11AQ6PDA7 123 aa8.79□□□□□ -1
COL25A1-203ENST00000399132 LINC01554Q52M75 96 aa8.78□□□□□ -1
COL25A1-203ENST00000399132 PLA2G1BP04054 148 aaKnown RBP8.76□□□□□ -1.01
COL25A1-203ENST00000399132 ADM2Q7Z4H4 148 aa8.76□□□□□ -1.01
COL25A1-203ENST00000399132 C8orf17Q9NRJ1 99 aa8.74□□□□□ -1.01
COL25A1-203ENST00000399132 IGLV7-46A0A075B6I9 117 aa8.74□□□□□ -1.01
COL25A1-203ENST00000399132 A0A1B0GVX0 72 aa8.74□□□□□ -1.01
COL25A1-203ENST00000399132 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
COL25A1-203ENST00000399132 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
COL25A1-203ENST00000399132 APOBP04114 4563 aaKnown RBP8.71□□□□□ -1.01
COL25A1-203ENST00000399132 RYR3Q15413 4870 aa8.69□□□□□ -1.02
COL25A1-203ENST00000399132 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
COL25A1-203ENST00000399132 TYMSOSQ8TAI1 123 aa8.67□□□□□ -1.02
COL25A1-203ENST00000399132 PCOTHQ58A44 107 aa8.66□□□□□ -1.02
COL25A1-203ENST00000399132 RETNLBQ9BQ08 111 aa8.65□□□□□ -1.03
COL25A1-203ENST00000399132 MRPL34Q9BQ48 92 aaKnown RBP8.63□□□□□ -1.03
COL25A1-203ENST00000399132 HRES1P13985 223 aa8.6□□□□□ -1.03
COL25A1-203ENST00000399132 ASB16-AS1Q495Z4 193 aa8.59□□□□□ -1.03
COL25A1-203ENST00000399132 Q5W150 140 aa8.56□□□□□ -1.04
COL25A1-203ENST00000399132 LRP1Q07954 4544 aaKnown RBP8.53□□□□□ -1.04
COL25A1-203ENST00000399132 TP53AIP1Q9HCN2 124 aa8.52□□□□□ -1.04
COL25A1-203ENST00000399132 LINC00304Q8N9R0 145 aa8.52□□□□□ -1.05
COL25A1-203ENST00000399132 KRTAP10-4P60372 401 aaPredicted RBP8.5□□□□□ -1.05
COL25A1-203ENST00000399132 J3QL48 77 aa8.5□□□□□ -1.05
COL25A1-203ENST00000399132 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
COL25A1-203ENST00000399132 SPINK1P00995 79 aa8.48□□□□□ -1.05
COL25A1-203ENST00000399132 CSAG1Q6PB30 78 aa8.46□□□□□ -1.05
COL25A1-203ENST00000399132 HSPG2P98160 4391 aa8.46□□□□□ -1.05
COL25A1-203ENST00000399132 PKHD1L1Q86WI1 4243 aa8.45□□□□□ -1.06
COL25A1-203ENST00000399132 KIAA1109Q2LD37 5005 aa8.44□□□□□ -1.06
COL25A1-203ENST00000399132 C9orf92A6NGG3 77 aa8.43□□□□□ -1.06
COL25A1-203ENST00000399132 SPATA8Q6RVD6 105 aa8.4□□□□□ -1.06
COL25A1-203ENST00000399132 EPPK1P58107 5090 aaKnown RBP8.4□□□□□ -1.06
COL25A1-203ENST00000399132 KRTAP16-1A8MUX0 517 aa8.4□□□□□ -1.06
COL25A1-203ENST00000399132 DMBT1Q9UGM3 2413 aaPredicted RBP8.39□□□□□ -1.07
COL25A1-203ENST00000399132 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
COL25A1-203ENST00000399132 FAM229AH3BQW9 127 aa8.38□□□□□ -1.07
COL25A1-203ENST00000399132 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
COL25A1-203ENST00000399132 Q5VSD8 79 aa8.38□□□□□ -1.07
COL25A1-203ENST00000399132 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
COL25A1-203ENST00000399132 IGKV2D-30A0A075B6S6 120 aa8.36□□□□□ -1.07
COL25A1-203ENST00000399132 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
COL25A1-203ENST00000399132 RYR1P21817 5038 aa8.35□□□□□ -1.07
COL25A1-203ENST00000399132 A0A1B0GU69 56 aa8.32□□□□□ -1.08
COL25A1-203ENST00000399132 MIR22HGQ0VDD5 57 aa8.31□□□□□ -1.08
COL25A1-203ENST00000399132 Q8N1X5 172 aa8.31□□□□□ -1.08
COL25A1-203ENST00000399132 TNXBP22105 4242 aa8.29□□□□□ -1.08
COL25A1-203ENST00000399132 ACYP2P14621 99 aa8.27□□□□□ -1.09
COL25A1-203ENST00000399132 UQCR11O14957 56 aa8.26□□□□□ -1.09
COL25A1-203ENST00000399132 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms