RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SPANXA2-OT1Q8N9U9 137 aa11.07□□□□□ -0.64
CHRFAM7A-202ENST00000397827 LOC101927531A0A1B0GV80 90 aa11.07□□□□□ -0.64
CHRFAM7A-202ENST00000397827 MOBPQ13875 183 aa11.06□□□□□ -0.64
CHRFAM7A-202ENST00000397827 PLAC8Q9NZF1 115 aa11.05□□□□□ -0.64
CHRFAM7A-202ENST00000397827 LINC00483Q53H64 154 aa11.05□□□□□ -0.64
CHRFAM7A-202ENST00000397827 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
CHRFAM7A-202ENST00000397827 LY6G6CO95867 125 aa11.03□□□□□ -0.64
CHRFAM7A-202ENST00000397827 DNAH6Q9C0G6 4158 aa11.03□□□□□ -0.64
CHRFAM7A-202ENST00000397827 H0Y9P7 68 aa11.03□□□□□ -0.64
CHRFAM7A-202ENST00000397827 WWC2-AS2Q96NR7 200 aa11.03□□□□□ -0.64
CHRFAM7A-202ENST00000397827 ZNF861PO60384 105 aa11.01□□□□□ -0.65
CHRFAM7A-202ENST00000397827 COA5Q86WW8 74 aa11.01□□□□□ -0.65
CHRFAM7A-202ENST00000397827 Q96NJ1 140 aa11.01□□□□□ -0.65
CHRFAM7A-202ENST00000397827 ZNF706Q9Y5V0 76 aaPredicted RBP11□□□□□ -0.65
CHRFAM7A-202ENST00000397827 MMP24-AS1A0A0U1RRL7 71 aa10.98□□□□□ -0.65
CHRFAM7A-202ENST00000397827 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
CHRFAM7A-202ENST00000397827 H3BS24 57 aa10.94□□□□□ -0.66
CHRFAM7A-202ENST00000397827 DNAH11Q96DT5 4516 aa10.94□□□□□ -0.66
CHRFAM7A-202ENST00000397827 DNAH5Q8TE73 4624 aa10.94□□□□□ -0.66
CHRFAM7A-202ENST00000397827 H3BPC8 53 aa10.92□□□□□ -0.66
CHRFAM7A-202ENST00000397827 SPINK7P58062 85 aa10.92□□□□□ -0.66
CHRFAM7A-202ENST00000397827 ALMS1Q8TCU4 4167 aa10.91□□□□□ -0.66
CHRFAM7A-202ENST00000397827 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
CHRFAM7A-202ENST00000397827 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
CHRFAM7A-202ENST00000397827 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
CHRFAM7A-202ENST00000397827 IGHV6-1A0A0B4J1U7 121 aa10.89□□□□□ -0.67
CHRFAM7A-202ENST00000397827 LINC01558Q9Y6Z2 57 aa10.88□□□□□ -0.67
CHRFAM7A-202ENST00000397827 LINC00313P59037 77 aa10.88□□□□□ -0.67
CHRFAM7A-202ENST00000397827 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
CHRFAM7A-202ENST00000397827 C8orf17Q9NRJ1 99 aa10.87□□□□□ -0.67
CHRFAM7A-202ENST00000397827 IGLV7-46A0A075B6I9 117 aa10.86□□□□□ -0.67
CHRFAM7A-202ENST00000397827 HYDINQ4G0P3 5121 aa10.85□□□□□ -0.67
CHRFAM7A-202ENST00000397827 A0A1B0GVX0 72 aa10.84□□□□□ -0.67
CHRFAM7A-202ENST00000397827 ASB16-AS1Q495Z4 193 aa10.84□□□□□ -0.67
CHRFAM7A-202ENST00000397827 PCOTHQ58A44 107 aa10.83□□□□□ -0.68
CHRFAM7A-202ENST00000397827 A0A087X002 238 aa10.82□□□□□ -0.68
CHRFAM7A-202ENST00000397827 CDK2AP2O75956 126 aa10.82□□□□□ -0.68
CHRFAM7A-202ENST00000397827 NOTCH2NLQ7Z3S9 236 aa10.82□□□□□ -0.68
CHRFAM7A-202ENST00000397827 SPINK6Q6UWN8 80 aa10.82□□□□□ -0.68
CHRFAM7A-202ENST00000397827 ADM2Q7Z4H4 148 aa10.8□□□□□ -0.68
CHRFAM7A-202ENST00000397827 LRP1BQ9NZR2 4599 aa10.8□□□□□ -0.68
CHRFAM7A-202ENST00000397827 PKD1P98161 4303 aa10.78□□□□□ -0.68
CHRFAM7A-202ENST00000397827 FAT2Q9NYQ8 4349 aa10.77□□□□□ -0.69
CHRFAM7A-202ENST00000397827 LINC01554Q52M75 96 aa10.77□□□□□ -0.69
CHRFAM7A-202ENST00000397827 TP53AIP1Q9HCN2 124 aa10.76□□□□□ -0.69
CHRFAM7A-202ENST00000397827 MRPL34Q9BQ48 92 aaKnown RBP10.75□□□□□ -0.69
CHRFAM7A-202ENST00000397827 KRTAP10-1P60331 282 aa10.74□□□□□ -0.69
CHRFAM7A-202ENST00000397827 SSBP3-AS1Q7Z2R9 100 aa10.69□□□□□ -0.7
CHRFAM7A-202ENST00000397827 HRES1P13985 223 aa10.68□□□□□ -0.7
CHRFAM7A-202ENST00000397827 Q6ZSA8 131 aa10.68□□□□□ -0.7
CHRFAM7A-202ENST00000397827 KRTAP13-2Q52LG2 175 aa10.65□□□□□ -0.7
CHRFAM7A-202ENST00000397827 VPS13BQ7Z7G8 4022 aa10.65□□□□□ -0.7
CHRFAM7A-202ENST00000397827 PLA2G1BP04054 148 aaKnown RBP10.65□□□□□ -0.7
CHRFAM7A-202ENST00000397827 Q5W150 140 aa10.61□□□□□ -0.71
CHRFAM7A-202ENST00000397827 PRR26Q8N8Z3 221 aa10.6□□□□□ -0.71
CHRFAM7A-202ENST00000397827 PKHD1P08F94 4074 aa10.58□□□□□ -0.72
CHRFAM7A-202ENST00000397827 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
CHRFAM7A-202ENST00000397827 KRTAP13-3Q3SY46 172 aa10.53□□□□□ -0.72
CHRFAM7A-202ENST00000397827 SACSQ9NZJ4 4579 aa10.5□□□□□ -0.73
CHRFAM7A-202ENST00000397827 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
CHRFAM7A-202ENST00000397827 CSAG1Q6PB30 78 aa10.44□□□□□ -0.74
CHRFAM7A-202ENST00000397827 TYMSOSQ8TAI1 123 aa10.42□□□□□ -0.74
CHRFAM7A-202ENST00000397827 KRTAP21-3Q3LHN1 58 aa10.39□□□□□ -0.75
CHRFAM7A-202ENST00000397827 KRTAP16-1A8MUX0 517 aa10.38□□□□□ -0.75
CHRFAM7A-202ENST00000397827 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
CHRFAM7A-202ENST00000397827 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
CHRFAM7A-202ENST00000397827 A0A1B0GU69 56 aa10.37□□□□□ -0.75
CHRFAM7A-202ENST00000397827 DYNC1H1Q14204 4646 aaKnown RBP10.36□□□□□ -0.75
CHRFAM7A-202ENST00000397827 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
CHRFAM7A-202ENST00000397827 ACYP2P14621 99 aa10.33□□□□□ -0.76
CHRFAM7A-202ENST00000397827 MIR22HGQ0VDD5 57 aa10.33□□□□□ -0.76
CHRFAM7A-202ENST00000397827 FAT1Q14517 4588 aa10.32□□□□□ -0.76
CHRFAM7A-202ENST00000397827 SPINK1P00995 79 aa10.31□□□□□ -0.76
CHRFAM7A-202ENST00000397827 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
CHRFAM7A-202ENST00000397827 UQCR11O14957 56 aa10.26□□□□□ -0.77
CHRFAM7A-202ENST00000397827 LINC00304Q8N9R0 145 aa10.26□□□□□ -0.77
CHRFAM7A-202ENST00000397827 IGKV2D-30A0A075B6S6 120 aa10.25□□□□□ -0.77
CHRFAM7A-202ENST00000397827 DMAC1Q96GE9 116 aa10.24□□□□□ -0.77
CHRFAM7A-202ENST00000397827 APOBP04114 4563 aaKnown RBP10.23□□□□□ -0.77
CHRFAM7A-202ENST00000397827 A0A1B0GVY2 172 aa10.19□□□□□ -0.78
CHRFAM7A-202ENST00000397827 KMT2CQ8NEZ4 4911 aaKnown RBP10.14□□□□□ -0.79
CHRFAM7A-202ENST00000397827 RYR2Q92736 4967 aa10.13□□□□□ -0.79
CHRFAM7A-202ENST00000397827 KRTAP10-4P60372 401 aaPredicted RBP10.13□□□□□ -0.79
CHRFAM7A-202ENST00000397827 RPS29P62273 56 aaKnown RBP10.13□□□□□ -0.79
CHRFAM7A-202ENST00000397827 PKHD1L1Q86WI1 4243 aa10.11□□□□□ -0.79
CHRFAM7A-202ENST00000397827 C9orf92A6NGG3 77 aa10.09□□□□□ -0.79
CHRFAM7A-202ENST00000397827 ROMO1P60602 79 aa10.07□□□□□ -0.8
CHRFAM7A-202ENST00000397827 Q8N1X5 172 aa10□□□□□ -0.81
CHRFAM7A-202ENST00000397827 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
CHRFAM7A-202ENST00000397827 C20orf166-AS1Q96NR2 134 aa9.94□□□□□ -0.82
CHRFAM7A-202ENST00000397827 LRP1Q07954 4544 aaKnown RBP9.93□□□□□ -0.82
CHRFAM7A-202ENST00000397827 A8MUU9 505 aa9.93□□□□□ -0.82
CHRFAM7A-202ENST00000397827 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
CHRFAM7A-202ENST00000397827 TNXBP22105 4242 aa9.83□□□□□ -0.84
CHRFAM7A-202ENST00000397827 HSPG2P98160 4391 aa9.83□□□□□ -0.84
CHRFAM7A-202ENST00000397827 P0C880 135 aa9.83□□□□□ -0.84
CHRFAM7A-202ENST00000397827 FAT3Q8TDW7 4589 aa9.82□□□□□ -0.84
CHRFAM7A-202ENST00000397827 RYR3Q15413 4870 aa9.8□□□□□ -0.84
CHRFAM7A-202ENST00000397827 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
CHRFAM7A-202ENST00000397827 KRTAP3-1Q9BYR8 98 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms