RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 IFI6P09912 130 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 IAPPP10997 89 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 RABAC1Q9UI14 185 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 SUPT6HQ7KZ85 1726 aaKnown RBP-1.81□□□□□ -2.7
CMC1-202ENST00000396610 ZNF831Q5JPB2 1677 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 DEPDC5O75140 1603 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 MYO3AQ8NEV4 1616 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 NWD1Q149M9 1564 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 MAGI3Q5TCQ9 1506 aa-1.81□□□□□ -2.7
CMC1-202ENST00000396610 FREM2Q5SZK8 3169 aa-1.82□□□□□ -2.7
CMC1-202ENST00000396610 IFI27P40305 119 aaPredicted RBP-1.82□□□□□ -2.7
CMC1-202ENST00000396610 NESP48681 1621 aa-1.82□□□□□ -2.7
CMC1-202ENST00000396610 LCE6AA0A183 80 aa-1.83□□□□□ -2.7
CMC1-202ENST00000396610 LYNX1G3V0Z9 82 aa-1.83□□□□□ -2.7
CMC1-202ENST00000396610 S100A16Q96FQ6 103 aaKnown RBP-1.83□□□□□ -2.7
CMC1-202ENST00000396610 NCOA2Q15596 1464 aa-1.83□□□□□ -2.7
CMC1-202ENST00000396610 PRUNE2Q8WUY3 3088 aa-1.83□□□□□ -2.7
CMC1-202ENST00000396610 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.84□□□□□ -2.7
CMC1-202ENST00000396610 KRTAP20-1Q3LI63 56 aa-1.84□□□□□ -2.7
CMC1-202ENST00000396610 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.84□□□□□ -2.7
CMC1-202ENST00000396610 TOGARAM1Q9Y4F4 1720 aa-1.85□□□□□ -2.71
CMC1-202ENST00000396610 Q9H521 79 aa-1.85□□□□□ -2.71
CMC1-202ENST00000396610 LTN1O94822 1766 aa-1.85□□□□□ -2.71
CMC1-202ENST00000396610 POLR1AO95602 1720 aaPredicted RBP-1.86□□□□□ -2.71
CMC1-202ENST00000396610 UMAD1C9J7I0 102 aa-1.86□□□□□ -2.71
CMC1-202ENST00000396610 CRYBG3Q68DQ2 2970 aa-1.87□□□□□ -2.71
CMC1-202ENST00000396610 IGLV5-48A0A075B6I7 105 aa-1.87□□□□□ -2.71
CMC1-202ENST00000396610 DOT1LQ8TEK3 1739 aa-1.87□□□□□ -2.71
CMC1-202ENST00000396610 PARP4Q9UKK3 1724 aaKnown RBP-1.87□□□□□ -2.71
CMC1-202ENST00000396610 UBR1Q8IWV7 1749 aa-1.88□□□□□ -2.71
CMC1-202ENST00000396610 CFAP54Q96N23 3096 aa-1.88□□□□□ -2.71
CMC1-202ENST00000396610 ANKRD26Q9UPS8 1709 aa-1.88□□□□□ -2.71
CMC1-202ENST00000396610 PEG3Q9GZU2 1588 aa-1.89□□□□□ -2.71
CMC1-202ENST00000396610 URB2Q14146 1524 aaKnown RBP-1.89□□□□□ -2.71
CMC1-202ENST00000396610 LY75O60449 1722 aa-1.89□□□□□ -2.71
CMC1-202ENST00000396610 ZFHX4Q86UP3 3567 aa-1.89□□□□□ -2.71
CMC1-202ENST00000396610 DDX60LQ5H9U9 1706 aaKnown RBP-1.91□□□□□ -2.71
CMC1-202ENST00000396610 CCNB3Q8WWL7 1395 aa-1.91□□□□□ -2.72
CMC1-202ENST00000396610 NDUFA4O00483 81 aa-1.92□□□□□ -2.72
CMC1-202ENST00000396610 DEFB4AO15263 64 aa-1.92□□□□□ -2.72
CMC1-202ENST00000396610 V9GYS6 101 aa-1.92□□□□□ -2.72
CMC1-202ENST00000396610 WT1-ASQ06250 92 aa-1.93□□□□□ -2.72
CMC1-202ENST00000396610 PVALEFA0A1B0GWK0 134 aa-1.94□□□□□ -2.72
CMC1-202ENST00000396610 DIP2BQ9P265 1576 aa-1.95□□□□□ -2.72
CMC1-202ENST00000396610 AKAP12Q02952 1782 aa-1.95□□□□□ -2.72
CMC1-202ENST00000396610 MYO15AQ9UKN7 3530 aa-1.96□□□□□ -2.72
CMC1-202ENST00000396610 ITSN1Q15811 1721 aa-1.97□□□□□ -2.72
CMC1-202ENST00000396610 TMEM131LA2VDJ0 1609 aa-1.97□□□□□ -2.72
CMC1-202ENST00000396610 LINC01546A6NGU7 62 aa-1.97□□□□□ -2.72
CMC1-202ENST00000396610 ITSN2Q9NZM3 1697 aa-1.97□□□□□ -2.73
CMC1-202ENST00000396610 MAST1Q9Y2H9 1570 aa-1.98□□□□□ -2.73
CMC1-202ENST00000396610 CCDC88BA6NC98 1476 aa-1.98□□□□□ -2.73
CMC1-202ENST00000396610 KANTRA0A1W2PQU2 76 aa-1.98□□□□□ -2.73
CMC1-202ENST00000396610 KIF1AQ12756 1690 aa-1.99□□□□□ -2.73
CMC1-202ENST00000396610 NREPQ16612 68 aa-1.99□□□□□ -2.73
CMC1-202ENST00000396610 NOP10Q9NPE3 64 aaKnown RBP-1.99□□□□□ -2.73
CMC1-202ENST00000396610 ARFGEF2Q9Y6D5 1785 aa-2□□□□□ -2.73
CMC1-202ENST00000396610 PLCH1Q4KWH8 1693 aa-2.01□□□□□ -2.73
CMC1-202ENST00000396610 DEFB131BA0A096LNP1 70 aa-2.01□□□□□ -2.73
CMC1-202ENST00000396610 RPS27P42677 84 aaKnown RBP-2.01□□□□□ -2.73
CMC1-202ENST00000396610 BVES-AS1Q5T3Y7 98 aa-2.01□□□□□ -2.73
CMC1-202ENST00000396610 RPS27LQ71UM5 84 aaKnown RBP-2.01□□□□□ -2.73
CMC1-202ENST00000396610 KIAA0586Q9BVV6 1533 aa-2.01□□□□□ -2.73
CMC1-202ENST00000396610 ZC3H13Q5T200 1668 aaKnown RBP-2.02□□□□□ -2.73
CMC1-202ENST00000396610 A0A1B0GUL6 1792 aa-2.02□□□□□ -2.73
CMC1-202ENST00000396610 PPLO60437 1756 aa-2.02□□□□□ -2.73
CMC1-202ENST00000396610 VPS13CQ709C8 3753 aa-2.02□□□□□ -2.73
CMC1-202ENST00000396610 HMGA1P17096 107 aaKnown RBP-2.02□□□□□ -2.73
CMC1-202ENST00000396610 ATP5EP2Q5VTU8 51 aa-2.02□□□□□ -2.73
CMC1-202ENST00000396610 TJP1Q07157 1748 aa-2.03□□□□□ -2.73
CMC1-202ENST00000396610 H3BUA1 57 aa-2.03□□□□□ -2.73
CMC1-202ENST00000396610 SPART-AS1P0CW21 52 aa-2.03□□□□□ -2.73
CMC1-202ENST00000396610 TDRG1Q3Y452 100 aa-2.03□□□□□ -2.73
CMC1-202ENST00000396610 ABCC3O15438 1527 aa-2.03□□□□□ -2.73
CMC1-202ENST00000396610 DMDP11532 3685 aa-2.04□□□□□ -2.74
CMC1-202ENST00000396610 A0A087WXM4 84 aa-2.04□□□□□ -2.74
CMC1-202ENST00000396610 SMARCA2P51531 1590 aa-2.04□□□□□ -2.74
CMC1-202ENST00000396610 WDFY3Q8IZQ1 3526 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 LRRIQ1Q96JM4 1722 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 A8MTW9 85 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 M0QZ58 72 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 MRPL33O75394 65 aaKnown RBP-2.05□□□□□ -2.74
CMC1-202ENST00000396610 MINOS1Q5TGZ0 78 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 SPEGQ15772 3267 aa-2.05□□□□□ -2.74
CMC1-202ENST00000396610 SFTA3P0C7M3 94 aa-2.06□□□□□ -2.74
CMC1-202ENST00000396610 CRIP1P50238 77 aa-2.06□□□□□ -2.74
CMC1-202ENST00000396610 PIK3C2BO00750 1634 aa-2.06□□□□□ -2.74
CMC1-202ENST00000396610 KIF14Q15058 1648 aa-2.06□□□□□ -2.74
CMC1-202ENST00000396610 THOC2Q8NI27 1593 aaKnown RBP-2.06□□□□□ -2.74
CMC1-202ENST00000396610 NRAPQ86VF7 1730 aa-2.07□□□□□ -2.74
CMC1-202ENST00000396610 M0QY20 66 aa-2.07□□□□□ -2.74
CMC1-202ENST00000396610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.07□□□□□ -2.74
CMC1-202ENST00000396610 KRTAP19-6Q3LI70 58 aa-2.08□□□□□ -2.74
CMC1-202ENST00000396610 SMIM13P0DJ93 91 aa-2.09□□□□□ -2.74
CMC1-202ENST00000396610 NCBP2-AS2Q69YL0 99 aa-2.09□□□□□ -2.74
CMC1-202ENST00000396610 RICTORQ6R327 1708 aa-2.09□□□□□ -2.74
CMC1-202ENST00000396610 FRYLO94915 3013 aa-2.09□□□□□ -2.74
CMC1-202ENST00000396610 FCER1GP30273 86 aa-2.1□□□□□ -2.75
CMC1-202ENST00000396610 DEFB121Q5J5C9 76 aa-2.1□□□□□ -2.75
CMC1-202ENST00000396610 ERVK-7P63135 1459 aa-2.11□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms