RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 H3BUA1 57 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 WT1-ASQ06250 92 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 DEFB136Q30KP8 78 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 USMG5Q96IX5 58 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 ITPR2Q14571 2701 aa2.05□□□□□ -2.08
GABPB1-204ENST00000396464 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.04□□□□□ -2.087e-11■■■■■ 55.5
GABPB1-204ENST00000396464 ZANQ9Y493 2812 aa2.03□□□□□ -2.08
GABPB1-204ENST00000396464 SVEP1Q4LDE5 3571 aa2.03□□□□□ -2.09
GABPB1-204ENST00000396464 WNK2Q9Y3S1 2297 aa2.03□□□□□ -2.09
GABPB1-204ENST00000396464 CUBNO60494 3623 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 FLG2Q5D862 2391 aaPredicted RBP2.02□□□□□ -2.09
GABPB1-204ENST00000396464 I3L2K1 104 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 NDUFA4O00483 81 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 ZNF469Q96JG9 3925 aaPredicted RBP2.02□□□□□ -2.09
GABPB1-204ENST00000396464 CCDC168Q8NDH2 2452 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 HIVEP2P31629 2446 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 MYO9AB2RTY4 2548 aa2.02□□□□□ -2.09
GABPB1-204ENST00000396464 K7EIM0 57 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 SERF2P84101 59 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 RHPN1-AS1Q9BWJ2 59 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 CREBBPQ92793 2442 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 SPG11Q96JI7 2443 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 MXRA5Q9NR99 2828 aa2.01□□□□□ -2.09
GABPB1-204ENST00000396464 ARL14EPLP0DKL9 152 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 COX7BP24311 80 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 UBE2DNLQ8IWF7 75 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 TMEM167BQ9NRX6 74 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 HIVEP1P15822 2718 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 K7EIL1 84 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 ENHOQ6UWT2 76 aa2□□□□□ -2.09
GABPB1-204ENST00000396464 NSD1Q96L73 2696 aaPredicted RBP1.99□□□□□ -2.09
GABPB1-204ENST00000396464 FLNBO75369 2602 aaKnown RBP1.99□□□□□ -2.09
GABPB1-204ENST00000396464 NAV3Q8IVL0 2385 aa1.99□□□□□ -2.09
GABPB1-204ENST00000396464 HTN1P15515 57 aa1.99□□□□□ -2.09
GABPB1-204ENST00000396464 DEFB131AP59861 70 aa1.99□□□□□ -2.09
GABPB1-204ENST00000396464 TIMM8BQ9Y5J9 83 aaPredicted RBP1.99□□□□□ -2.09
GABPB1-204ENST00000396464 NIPBLQ6KC79 2804 aaeCLIP1.98□□□□□ -2.09
GABPB1-204ENST00000396464 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
GABPB1-204ENST00000396464 F8P00451 2351 aa1.97□□□□□ -2.09
GABPB1-204ENST00000396464 NF1P21359 2839 aa1.97□□□□□ -2.09
GABPB1-204ENST00000396464 DEFB114Q30KQ6 69 aa1.97□□□□□ -2.09
GABPB1-204ENST00000396464 SONP18583 2426 aaKnown RBP1.97□□□□□ -2.09
GABPB1-204ENST00000396464 ANK3Q12955 4377 aaKnown RBP1.96□□□□□ -2.1
GABPB1-204ENST00000396464 ACANP16112 2415 aa1.96□□□□□ -2.1
GABPB1-204ENST00000396464 TLN2Q9Y4G6 2542 aa1.96□□□□□ -2.1
GABPB1-204ENST00000396464 MAST4O15021 2626 aa1.96□□□□□ -2.1
GABPB1-204ENST00000396464 KRTAP13-1Q8IUC0 172 aa1.96□□□□□ -2.1
GABPB1-204ENST00000396464 FBN1P35555 2871 aaKnown RBP1.95□□□□□ -2.1
GABPB1-204ENST00000396464 DEFB1P60022 68 aa1.95□□□□□ -2.1
GABPB1-204ENST00000396464 KLK9Q2XQG4 91 aa1.95□□□□□ -2.1
GABPB1-204ENST00000396464 DEFB135Q30KP9 77 aa1.95□□□□□ -2.1
GABPB1-204ENST00000396464 CSPG4Q6UVK1 2322 aa1.94□□□□□ -2.1
GABPB1-204ENST00000396464 TEP1Q99973 2627 aaKnown RBP1.94□□□□□ -2.1
GABPB1-204ENST00000396464 HTN3P15516 51 aa1.94□□□□□ -2.1
GABPB1-204ENST00000396464 MTORP42345 2549 aa1.94□□□□□ -2.1
GABPB1-204ENST00000396464 TNCP24821 2201 aa1.94□□□□□ -2.1
GABPB1-204ENST00000396464 SPINK4O60575 86 aa1.93□□□□□ -2.1
GABPB1-204ENST00000396464 KRTAP21-3Q3LHN1 58 aa1.93□□□□□ -2.1
GABPB1-204ENST00000396464 UBL5Q9BZL1 73 aa1.93□□□□□ -2.1
GABPB1-204ENST00000396464 TENM1Q9UKZ4 2725 aa1.93□□□□□ -2.1
GABPB1-204ENST00000396464 DEFB4AO15263 64 aa1.92□□□□□ -2.1
GABPB1-204ENST00000396464 DEFB130BP0DP73 79 aa1.92□□□□□ -2.1
GABPB1-204ENST00000396464 DEFB130AP0DP74 79 aa1.92□□□□□ -2.1
GABPB1-204ENST00000396464 FCER1GP30273 86 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 KRTAP12-4P60329 112 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 NOP10Q9NPE3 64 aaKnown RBP1.91□□□□□ -2.1
GABPB1-204ENST00000396464 SETD2Q9BYW2 2564 aaPredicted RBP1.91□□□□□ -2.1
GABPB1-204ENST00000396464 WNK1Q9H4A3 2382 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 ATRQ13535 2644 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 C2CD3Q4AC94 2353 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 SPART-AS1P0CW21 52 aa1.91□□□□□ -2.1
GABPB1-204ENST00000396464 JMJD1CQ15652 2540 aa1.9□□□□□ -2.1
GABPB1-204ENST00000396464 ANK2Q01484 3957 aa1.9□□□□□ -2.11
GABPB1-204ENST00000396464 CRIPTQ9P021 101 aa1.9□□□□□ -2.11
GABPB1-204ENST00000396464 DEFB131BA0A096LNP1 70 aa1.89□□□□□ -2.11
GABPB1-204ENST00000396464 A0A096LPF7 62 aa1.89□□□□□ -2.11
GABPB1-204ENST00000396464 VWFP04275 2813 aa1.89□□□□□ -2.11
GABPB1-204ENST00000396464 SMIM27A0A1W2PRY6 76 aa1.88□□□□□ -2.11
GABPB1-204ENST00000396464 K7EMI3 77 aa1.88□□□□□ -2.11
GABPB1-204ENST00000396464 CRIP1P50238 77 aa1.88□□□□□ -2.11
GABPB1-204ENST00000396464 STAB1Q9NY15 2570 aa1.88□□□□□ -2.11
GABPB1-204ENST00000396464 PKD1L1Q8TDX9 2849 aa1.87□□□□□ -2.11
GABPB1-204ENST00000396464 A8MTW9 85 aa1.87□□□□□ -2.11
GABPB1-204ENST00000396464 ANGP03950 147 aaKnown RBP1.87□□□□□ -2.11
GABPB1-204ENST00000396464 DEFB104AQ8WTQ1 72 aa1.87□□□□□ -2.11
GABPB1-204ENST00000396464 PRO0255Q9UI72 69 aa1.87□□□□□ -2.11
GABPB1-204ENST00000396464 COL6A5A8TX70 2615 aa1.86□□□□□ -2.11
GABPB1-204ENST00000396464 RPL39LQ96EH5 51 aaKnown RBP1.86□□□□□ -2.11
GABPB1-204ENST00000396464 TP53AIP1Q9HCN2 124 aa1.86□□□□□ -2.11
GABPB1-204ENST00000396464 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 I3L3M4 83 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 CLPSL2Q6UWE3 100 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 Q6ZSA8 131 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 SORL1Q92673 2214 aa1.85□□□□□ -2.11
GABPB1-204ENST00000396464 SMIM2Q9BVW6 85 aa1.84□□□□□ -2.11
GABPB1-204ENST00000396464 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
GABPB1-204ENST00000396464 DNHD1Q96M86 4753 aa1.84□□□□□ -2.11
GABPB1-204ENST00000396464 TRRAPQ9Y4A5 3859 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms