RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 DNAH9Q9NYC9 4486 aa8.68□□□□□ -1.02
SREBF1-205ENST00000395757 CDC42SE1Q9NRR8 79 aa8.67□□□□□ -1.02
SREBF1-205ENST00000395757 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
SREBF1-205ENST00000395757 MMP24-AS1A0A0U1RRL7 71 aa8.65□□□□□ -1.03
SREBF1-205ENST00000395757 WWC2-AS2Q96NR7 200 aa8.65□□□□□ -1.03
SREBF1-205ENST00000395757 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
SREBF1-205ENST00000395757 CYP4F30PQ9H0H9 118 aa8.63□□□□□ -1.03
SREBF1-205ENST00000395757 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
SREBF1-205ENST00000395757 SPRR1BP22528 89 aa8.62□□□□□ -1.03
SREBF1-205ENST00000395757 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
SREBF1-205ENST00000395757 MRPL34Q9BQ48 92 aaKnown RBP8.6□□□□□ -1.03
SREBF1-205ENST00000395757 DMBT1Q9UGM3 2413 aaPredicted RBP8.6□□□□□ -1.03
SREBF1-205ENST00000395757 IGKV2D-30A0A075B6S6 120 aa8.6□□□□□ -1.03
SREBF1-205ENST00000395757 IGKV2-30P06310 120 aa8.6□□□□□ -1.03
SREBF1-205ENST00000395757 DNAH7Q8WXX0 4024 aa8.59□□□□□ -1.03
SREBF1-205ENST00000395757 Q6ZR54 194 aa8.59□□□□□ -1.03
SREBF1-205ENST00000395757 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
SREBF1-205ENST00000395757 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
SREBF1-205ENST00000395757 FLG2Q5D862 2391 aaPredicted RBP8.58□□□□□ -1.04
SREBF1-205ENST00000395757 DNHD1Q96M86 4753 aa8.57□□□□□ -1.04
SREBF1-205ENST00000395757 KRTAP10-1P60331 282 aa8.57□□□□□ -1.04
SREBF1-205ENST00000395757 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
SREBF1-205ENST00000395757 SPINK7P58062 85 aa8.57□□□□□ -1.04
SREBF1-205ENST00000395757 KRTAP13-1Q8IUC0 172 aa8.57□□□□□ -1.04
SREBF1-205ENST00000395757 PRKDCP78527 4128 aaKnown RBP8.56□□□□□ -1.04
SREBF1-205ENST00000395757 Q75L30 129 aa8.56□□□□□ -1.04
SREBF1-205ENST00000395757 COA5Q86WW8 74 aa8.55□□□□□ -1.04
SREBF1-205ENST00000395757 STARD9Q9P2P6 4700 aa8.54□□□□□ -1.04
SREBF1-205ENST00000395757 SPINK1P00995 79 aa8.54□□□□□ -1.04
SREBF1-205ENST00000395757 ZCCHC13Q8WW36 166 aaKnown RBP8.52□□□□□ -1.04
SREBF1-205ENST00000395757 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
SREBF1-205ENST00000395757 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
SREBF1-205ENST00000395757 Q96NJ1 140 aa8.49□□□□□ -1.05
SREBF1-205ENST00000395757 TP53AIP1Q9HCN2 124 aa8.49□□□□□ -1.05
SREBF1-205ENST00000395757 KMT2AQ03164 3969 aa8.49□□□□□ -1.05
SREBF1-205ENST00000395757 Q5W150 140 aa8.46□□□□□ -1.06
SREBF1-205ENST00000395757 DNAH3Q8TD57 4116 aa8.45□□□□□ -1.06
SREBF1-205ENST00000395757 DNAH1Q9P2D7 4330 aa8.45□□□□□ -1.06
SREBF1-205ENST00000395757 C9orf92A6NGG3 77 aa8.45□□□□□ -1.06
SREBF1-205ENST00000395757 LINC00483Q53H64 154 aa8.44□□□□□ -1.06
SREBF1-205ENST00000395757 H3BPC8 53 aa8.43□□□□□ -1.06
SREBF1-205ENST00000395757 SSBP3-AS1Q7Z2R9 100 aa8.42□□□□□ -1.06
SREBF1-205ENST00000395757 LCE6AA0A183 80 aa8.42□□□□□ -1.06
SREBF1-205ENST00000395757 DNAH11Q96DT5 4516 aa8.39□□□□□ -1.07
SREBF1-205ENST00000395757 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
SREBF1-205ENST00000395757 FRAS1Q86XX4 4008 aa8.37□□□□□ -1.07
SREBF1-205ENST00000395757 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
SREBF1-205ENST00000395757 HRES1P13985 223 aa8.34□□□□□ -1.07
SREBF1-205ENST00000395757 Q8N1X5 172 aa8.34□□□□□ -1.07
SREBF1-205ENST00000395757 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
SREBF1-205ENST00000395757 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
SREBF1-205ENST00000395757 LINC00304Q8N9R0 145 aa8.3□□□□□ -1.08
SREBF1-205ENST00000395757 ACYP2P14621 99 aa8.29□□□□□ -1.08
SREBF1-205ENST00000395757 VPS13DQ5THJ4 4388 aa8.28□□□□□ -1.08
SREBF1-205ENST00000395757 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
SREBF1-205ENST00000395757 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
SREBF1-205ENST00000395757 DNAH8Q96JB1 4490 aa8.24□□□□□ -1.09
SREBF1-205ENST00000395757 DNAH2Q9P225 4427 aa8.23□□□□□ -1.09
SREBF1-205ENST00000395757 DNAH17Q9UFH2 4485 aa8.23□□□□□ -1.09
SREBF1-205ENST00000395757 DNAH6Q9C0G6 4158 aa8.23□□□□□ -1.09
SREBF1-205ENST00000395757 A0A1B0GU69 56 aa8.22□□□□□ -1.09
SREBF1-205ENST00000395757 ROMO1P60602 79 aa8.21□□□□□ -1.1
SREBF1-205ENST00000395757 LRP1BQ9NZR2 4599 aa8.18□□□□□ -1.1
SREBF1-205ENST00000395757 KRTAP1-4P0C5Y4 121 aa8.16□□□□□ -1.1
SREBF1-205ENST00000395757 CRIPTQ9P021 101 aa8.16□□□□□ -1.1
SREBF1-205ENST00000395757 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
SREBF1-205ENST00000395757 Q6ZSA8 131 aa8.11□□□□□ -1.11
SREBF1-205ENST00000395757 HECTD4Q9Y4D8 3996 aa8.11□□□□□ -1.11
SREBF1-205ENST00000395757 HYDINQ4G0P3 5121 aa8.11□□□□□ -1.11
SREBF1-205ENST00000395757 FAT1Q14517 4588 aa8.1□□□□□ -1.11
SREBF1-205ENST00000395757 SPINT4Q6UDR6 99 aa8.07□□□□□ -1.12
SREBF1-205ENST00000395757 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
SREBF1-205ENST00000395757 NDUFAF8A1L188 74 aa8.04□□□□□ -1.12
SREBF1-205ENST00000395757 DYNC2H1Q8NCM8 4307 aaKnown RBP8.02□□□□□ -1.12
SREBF1-205ENST00000395757 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
SREBF1-205ENST00000395757 UQCR11O14957 56 aa8.01□□□□□ -1.13
SREBF1-205ENST00000395757 DMAC1Q96GE9 116 aa8.01□□□□□ -1.13
SREBF1-205ENST00000395757 PKHD1P08F94 4074 aa7.96□□□□□ -1.13
SREBF1-205ENST00000395757 VPS13BQ7Z7G8 4022 aa7.96□□□□□ -1.14
SREBF1-205ENST00000395757 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.14
SREBF1-205ENST00000395757 P0C880 135 aa7.95□□□□□ -1.14
SREBF1-205ENST00000395757 KRTAP25-1Q3LHN0 102 aa7.91□□□□□ -1.14
SREBF1-205ENST00000395757 Q5VSD8 79 aa7.9□□□□□ -1.14
SREBF1-205ENST00000395757 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
SREBF1-205ENST00000395757 DYNC1H1Q14204 4646 aaKnown RBP7.87□□□□□ -1.15
SREBF1-205ENST00000395757 A8MUU9 505 aa7.86□□□□□ -1.15
SREBF1-205ENST00000395757 LUZP6Q538Z0 58 aa7.85□□□□□ -1.15
SREBF1-205ENST00000395757 MYCBP2O75592 4640 aa7.83□□□□□ -1.16
SREBF1-205ENST00000395757 ALMS1Q8TCU4 4167 aa7.82□□□□□ -1.16
SREBF1-205ENST00000395757 A0A0D9SG42 100 aa7.81□□□□□ -1.16
SREBF1-205ENST00000395757 FAT2Q9NYQ8 4349 aa7.8□□□□□ -1.16
SREBF1-205ENST00000395757 C20orf166-AS1Q96NR2 134 aa7.79□□□□□ -1.16
SREBF1-205ENST00000395757 SACSQ9NZJ4 4579 aa7.76□□□□□ -1.17
SREBF1-205ENST00000395757 LRP1Q07954 4544 aaKnown RBP7.74□□□□□ -1.17
SREBF1-205ENST00000395757 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
SREBF1-205ENST00000395757 K7ERS5 55 aa7.72□□□□□ -1.17
SREBF1-205ENST00000395757 A0A1B0GU33 70 aa7.72□□□□□ -1.17
SREBF1-205ENST00000395757 KMT2CQ8NEZ4 4911 aaKnown RBP7.71□□□□□ -1.18
SREBF1-205ENST00000395757 PKD1P98161 4303 aa7.67□□□□□ -1.18
SREBF1-205ENST00000395757 KRTAP21-3Q3LHN1 58 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms