RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 Q5XG85 94 aa11.2□□□□□ -0.62
LMNB1-202ENST00000395354 KRTAP10-8P60410 259 aa11.16□□□□□ -0.62
LMNB1-202ENST00000395354 TYMSOSQ8TAI1 123 aa11.16□□□□□ -0.62
LMNB1-202ENST00000395354 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
LMNB1-202ENST00000395354 MT1HL1P0DM35 61 aa11.13□□□□□ -0.63
LMNB1-202ENST00000395354 FAT3Q8TDW7 4589 aa11.12□□□□□ -0.63
LMNB1-202ENST00000395354 LIMD2Q9BT23 127 aa11.12□□□□□ -0.63
LMNB1-202ENST00000395354 J3QL48 77 aa11.11□□□□□ -0.63
LMNB1-202ENST00000395354 C4orf48Q5BLP8 95 aa11.11□□□□□ -0.63
LMNB1-202ENST00000395354 PCLOQ9Y6V0 5065 aa11.1□□□□□ -0.63
LMNB1-202ENST00000395354 A0A1B0GVX0 72 aa11.1□□□□□ -0.63
LMNB1-202ENST00000395354 CASC2Q6XLA1 102 aa11.1□□□□□ -0.63
LMNB1-202ENST00000395354 SPINK1P00995 79 aa11.09□□□□□ -0.63
LMNB1-202ENST00000395354 WFDC13Q8IUB5 93 aa11.08□□□□□ -0.64
LMNB1-202ENST00000395354 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
LMNB1-202ENST00000395354 MMP24-AS1A0A0U1RRL7 71 aa11.07□□□□□ -0.64
LMNB1-202ENST00000395354 RPS29P62273 56 aaKnown RBP11.07□□□□□ -0.64
LMNB1-202ENST00000395354 SPAG11AQ6PDA7 123 aa11.07□□□□□ -0.64
LMNB1-202ENST00000395354 C8orf17Q9NRJ1 99 aa11.05□□□□□ -0.64
LMNB1-202ENST00000395354 LINC00304Q8N9R0 145 aa11.03□□□□□ -0.64
LMNB1-202ENST00000395354 IGHV6-1A0A0B4J1U7 121 aa11.03□□□□□ -0.64
LMNB1-202ENST00000395354 hDV103S1A0JD37 113 aa11.03□□□□□ -0.64
LMNB1-202ENST00000395354 C1orf195Q5TG92 126 aa11.03□□□□□ -0.64
LMNB1-202ENST00000395354 TNXBP22105 4242 aa11.02□□□□□ -0.65
LMNB1-202ENST00000395354 C20orf197Q8N268 126 aa11.02□□□□□ -0.65
LMNB1-202ENST00000395354 KLKP1Q107X0 134 aa11□□□□□ -0.65
LMNB1-202ENST00000395354 C8orf87E5RJ46 101 aa10.98□□□□□ -0.65
LMNB1-202ENST00000395354 C5orf47Q569G3 176 aa10.97□□□□□ -0.65
LMNB1-202ENST00000395354 TMEM254Q8TBM7 123 aa10.97□□□□□ -0.65
LMNB1-202ENST00000395354 A0A0U1RQV1 116 aa10.93□□□□□ -0.66
LMNB1-202ENST00000395354 MRPL34Q9BQ48 92 aaKnown RBP10.93□□□□□ -0.66
LMNB1-202ENST00000395354 CYSTM1Q9H1C7 97 aa10.93□□□□□ -0.66
LMNB1-202ENST00000395354 TP53AIP1Q9HCN2 124 aa10.92□□□□□ -0.66
LMNB1-202ENST00000395354 NDUFC1O43677 76 aa10.91□□□□□ -0.66
LMNB1-202ENST00000395354 NOTCH2NLQ7Z3S9 236 aa10.9□□□□□ -0.66
LMNB1-202ENST00000395354 SNURFQ9Y675 71 aa10.9□□□□□ -0.67
LMNB1-202ENST00000395354 LINC00313P59037 77 aa10.88□□□□□ -0.67
LMNB1-202ENST00000395354 TMEM258P61165 79 aa10.87□□□□□ -0.67
LMNB1-202ENST00000395354 MP68P56378 58 aa10.86□□□□□ -0.67
LMNB1-202ENST00000395354 H3BPC8 53 aa10.86□□□□□ -0.67
LMNB1-202ENST00000395354 H7BZZ5 65 aa10.85□□□□□ -0.67
LMNB1-202ENST00000395354 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
LMNB1-202ENST00000395354 TRAV22A0A0B4J277 110 aa10.81□□□□□ -0.68
LMNB1-202ENST00000395354 H0Y9P7 68 aa10.81□□□□□ -0.68
LMNB1-202ENST00000395354 NDUFS5O43920 106 aa10.81□□□□□ -0.68
LMNB1-202ENST00000395354 Q8N9P0 234 aaPredicted RBP10.77□□□□□ -0.69
LMNB1-202ENST00000395354 KRTAP16-1A8MUX0 517 aa10.76□□□□□ -0.69
LMNB1-202ENST00000395354 LINC00208Q96KT6 92 aa10.75□□□□□ -0.69
LMNB1-202ENST00000395354 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
LMNB1-202ENST00000395354 HERC1Q15751 4861 aa10.72□□□□□ -0.69
LMNB1-202ENST00000395354 FAM236DA0A1B0GTK5 79 aa10.71□□□□□ -0.69
LMNB1-202ENST00000395354 FAM236CP0DP71 79 aa10.71□□□□□ -0.69
LMNB1-202ENST00000395354 C1orf64Q8NEQ6 169 aa10.71□□□□□ -0.69
LMNB1-202ENST00000395354 ATP5EP56381 51 aaPredicted RBP10.7□□□□□ -0.7
LMNB1-202ENST00000395354 PRR4Q16378 134 aa10.68□□□□□ -0.7
LMNB1-202ENST00000395354 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
LMNB1-202ENST00000395354 FP248Q71RG6 208 aaPredicted RBP10.64□□□□□ -0.71
LMNB1-202ENST00000395354 Q5W150 140 aa10.63□□□□□ -0.71
LMNB1-202ENST00000395354 RPS28P62857 69 aaKnown RBP10.62□□□□□ -0.71
LMNB1-202ENST00000395354 IGLV7-46A0A075B6I9 117 aa10.61□□□□□ -0.71
LMNB1-202ENST00000395354 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
LMNB1-202ENST00000395354 SPANXA2-OT1Q8N9U9 137 aa10.57□□□□□ -0.72
LMNB1-202ENST00000395354 SERP1Q9Y6X1 66 aa10.54□□□□□ -0.72
LMNB1-202ENST00000395354 C20orf166-AS1Q96NR2 134 aa10.53□□□□□ -0.72
LMNB1-202ENST00000395354 C9orf92A6NGG3 77 aa10.52□□□□□ -0.73
LMNB1-202ENST00000395354 A8MUU9 505 aa10.52□□□□□ -0.73
LMNB1-202ENST00000395354 CYP4F30PQ9H0H9 118 aa10.52□□□□□ -0.73
LMNB1-202ENST00000395354 IGKV2-30P06310 120 aa10.48□□□□□ -0.73
LMNB1-202ENST00000395354 TPRXLQ17RH7 258 aa10.48□□□□□ -0.73
LMNB1-202ENST00000395354 HMCN2Q8NDA2 5059 aa10.47□□□□□ -0.73
LMNB1-202ENST00000395354 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
LMNB1-202ENST00000395354 Q75L30 129 aa10.42□□□□□ -0.74
LMNB1-202ENST00000395354 LPAP08519 4548 aa10.39□□□□□ -0.75
LMNB1-202ENST00000395354 IGKV2D-30A0A075B6S6 120 aa10.34□□□□□ -0.75
LMNB1-202ENST00000395354 C7orf65Q6ZTY9 151 aa10.34□□□□□ -0.75
LMNB1-202ENST00000395354 HRES1P13985 223 aa10.32□□□□□ -0.76
LMNB1-202ENST00000395354 LRP2P98164 4655 aa10.32□□□□□ -0.76
LMNB1-202ENST00000395354 XP32Q5T750 250 aa10.32□□□□□ -0.76
LMNB1-202ENST00000395354 SMIM26A0A096LP01 95 aa10.29□□□□□ -0.76
LMNB1-202ENST00000395354 RPL37P61927 97 aaKnown RBP10.27□□□□□ -0.76
LMNB1-202ENST00000395354 ATP11AUNQ6ZP68 121 aa10.24□□□□□ -0.77
LMNB1-202ENST00000395354 DMAC1Q96GE9 116 aa10.22□□□□□ -0.77
LMNB1-202ENST00000395354 COA5Q86WW8 74 aa10.21□□□□□ -0.78
LMNB1-202ENST00000395354 ACYP2P14621 99 aa10.2□□□□□ -0.78
LMNB1-202ENST00000395354 SPINK7P58062 85 aa10.18□□□□□ -0.78
LMNB1-202ENST00000395354 SEC61BP60468 96 aaKnown RBP10.15□□□□□ -0.78
LMNB1-202ENST00000395354 UBR4Q5T4S7 5183 aa10.11□□□□□ -0.79
LMNB1-202ENST00000395354 A8MUN3 132 aa10.11□□□□□ -0.79
LMNB1-202ENST00000395354 C4orf26Q17RF5 130 aa10.05□□□□□ -0.8
LMNB1-202ENST00000395354 Q1T7F1 81 aa10.05□□□□□ -0.8
LMNB1-202ENST00000395354 V9GYY9 64 aa10.04□□□□□ -0.8
LMNB1-202ENST00000395354 MPLKIPQ8TAP9 179 aa10.02□□□□□ -0.81
LMNB1-202ENST00000395354 MUC17Q685J3 4493 aa10.02□□□□□ -0.81
LMNB1-202ENST00000395354 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
LMNB1-202ENST00000395354 COX6B2Q6YFQ2 88 aa9.97□□□□□ -0.81
LMNB1-202ENST00000395354 KRTAP4-1Q9BYQ7 146 aa9.95□□□□□ -0.82
LMNB1-202ENST00000395354 KRTAP3-1Q9BYR8 98 aa9.94□□□□□ -0.82
LMNB1-202ENST00000395354 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
LMNB1-202ENST00000395354 LINC01558Q9Y6Z2 57 aa9.88□□□□□ -0.83
LMNB1-202ENST00000395354 MUC2Q02817 5179 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms