RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
SSH2-203ENST00000394848 SMIM20Q8N5G0 67 aa7.33□□□□□ -1.24
SSH2-203ENST00000394848 UQCRQO14949 82 aa7.32□□□□□ -1.24
SSH2-203ENST00000394848 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
SSH2-203ENST00000394848 NDUFB1O75438 58 aa7.31□□□□□ -1.24
SSH2-203ENST00000394848 HCG22E2RYF7 251 aa7.31□□□□□ -1.24
SSH2-203ENST00000394848 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
SSH2-203ENST00000394848 PRR26Q8N8Z3 221 aa7.29□□□□□ -1.24
SSH2-203ENST00000394848 ASB16-AS1Q495Z4 193 aa7.28□□□□□ -1.24
SSH2-203ENST00000394848 Q5XG85 94 aa7.27□□□□□ -1.25
SSH2-203ENST00000394848 WFDC13Q8IUB5 93 aa7.26□□□□□ -1.25
SSH2-203ENST00000394848 ABCA13Q86UQ4 5058 aa7.26□□□□□ -1.25
SSH2-203ENST00000394848 OCR1Q9BZK8 76 aa7.25□□□□□ -1.25
SSH2-203ENST00000394848 FLG2Q5D862 2391 aaPredicted RBP7.25□□□□□ -1.25
SSH2-203ENST00000394848 CASC2Q6XLA1 102 aa7.25□□□□□ -1.25
SSH2-203ENST00000394848 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
SSH2-203ENST00000394848 A0A1B0GVX0 72 aa7.24□□□□□ -1.25
SSH2-203ENST00000394848 KRTAP29-1A8MX34 341 aaPredicted RBP7.24□□□□□ -1.25
SSH2-203ENST00000394848 SPINK1P00995 79 aa7.24□□□□□ -1.25
SSH2-203ENST00000394848 LIMD2Q9BT23 127 aa7.24□□□□□ -1.25
SSH2-203ENST00000394848 MYCBP2O75592 4640 aa7.24□□□□□ -1.25
SSH2-203ENST00000394848 IGHV6-1A0A0B4J1U7 121 aa7.23□□□□□ -1.25
SSH2-203ENST00000394848 MMP24-AS1A0A0U1RRL7 71 aa7.22□□□□□ -1.25
SSH2-203ENST00000394848 C1orf195Q5TG92 126 aa7.22□□□□□ -1.25
SSH2-203ENST00000394848 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
SSH2-203ENST00000394848 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.25
SSH2-203ENST00000394848 C8orf17Q9NRJ1 99 aa7.21□□□□□ -1.25
SSH2-203ENST00000394848 LRP1Q07954 4544 aaKnown RBP7.21□□□□□ -1.26
SSH2-203ENST00000394848 hDV103S1A0JD37 113 aa7.2□□□□□ -1.26
SSH2-203ENST00000394848 C20orf197Q8N268 126 aa7.2□□□□□ -1.26
SSH2-203ENST00000394848 OXTP01178 125 aa7.18□□□□□ -1.26
SSH2-203ENST00000394848 PCLOQ9Y6V0 5065 aa7.17□□□□□ -1.26
SSH2-203ENST00000394848 RPS29P62273 56 aaKnown RBP7.17□□□□□ -1.26
SSH2-203ENST00000394848 NOTCH2NLQ7Z3S9 236 aa7.17□□□□□ -1.26
SSH2-203ENST00000394848 FAT3Q8TDW7 4589 aa7.16□□□□□ -1.26
SSH2-203ENST00000394848 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
SSH2-203ENST00000394848 CYSTM1Q9H1C7 97 aa7.15□□□□□ -1.26
SSH2-203ENST00000394848 LCE3BQ5TA77 95 aa7.15□□□□□ -1.27
SSH2-203ENST00000394848 TMEM254Q8TBM7 123 aa7.15□□□□□ -1.27
SSH2-203ENST00000394848 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
SSH2-203ENST00000394848 C5orf47Q569G3 176 aa7.14□□□□□ -1.27
SSH2-203ENST00000394848 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SSH2-203ENST00000394848 C8orf87E5RJ46 101 aa7.13□□□□□ -1.27
SSH2-203ENST00000394848 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
SSH2-203ENST00000394848 MRPL34Q9BQ48 92 aaKnown RBP7.13□□□□□ -1.27
SSH2-203ENST00000394848 LINC00313P59037 77 aa7.12□□□□□ -1.27
SSH2-203ENST00000394848 KRTAP4-8A0A0G2JLE6 195 aa7.11□□□□□ -1.27
SSH2-203ENST00000394848 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
SSH2-203ENST00000394848 A0A0U1RQV1 116 aa7.1□□□□□ -1.27
SSH2-203ENST00000394848 NDUFS5O43920 106 aa7.1□□□□□ -1.27
SSH2-203ENST00000394848 TP53AIP1Q9HCN2 124 aa7.1□□□□□ -1.27
SSH2-203ENST00000394848 TNXBP22105 4242 aa7.09□□□□□ -1.27
SSH2-203ENST00000394848 MP68P56378 58 aa7.08□□□□□ -1.28
SSH2-203ENST00000394848 KRTAP9-9Q9BYP9 154 aa7.07□□□□□ -1.28
SSH2-203ENST00000394848 KRTAP9-4Q9BYQ2 154 aa7.07□□□□□ -1.28
SSH2-203ENST00000394848 H7BZZ5 65 aa7.06□□□□□ -1.28
SSH2-203ENST00000394848 J3QL48 77 aa7.06□□□□□ -1.28
SSH2-203ENST00000394848 NDUFC1O43677 76 aa7.06□□□□□ -1.28
SSH2-203ENST00000394848 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
SSH2-203ENST00000394848 DMBT1Q9UGM3 2413 aaPredicted RBP7.06□□□□□ -1.28
SSH2-203ENST00000394848 H0Y9P7 68 aa7.05□□□□□ -1.28
SSH2-203ENST00000394848 TMEM258P61165 79 aa7.05□□□□□ -1.28
SSH2-203ENST00000394848 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
SSH2-203ENST00000394848 LINC00208Q96KT6 92 aa7.04□□□□□ -1.28
SSH2-203ENST00000394848 ZCCHC13Q8WW36 166 aaKnown RBP7.03□□□□□ -1.28
SSH2-203ENST00000394848 H3BPC8 53 aa7.03□□□□□ -1.28
SSH2-203ENST00000394848 KRTAP16-1A8MUX0 517 aa7.01□□□□□ -1.29
SSH2-203ENST00000394848 Q8N9P0 234 aaPredicted RBP7.01□□□□□ -1.29
SSH2-203ENST00000394848 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
SSH2-203ENST00000394848 RETNLBQ9BQ08 111 aa7□□□□□ -1.29
SSH2-203ENST00000394848 Q5W150 140 aa6.97□□□□□ -1.29
SSH2-203ENST00000394848 FAM236DA0A1B0GTK5 79 aa6.96□□□□□ -1.3
SSH2-203ENST00000394848 FAM236CP0DP71 79 aa6.96□□□□□ -1.3
SSH2-203ENST00000394848 KRTAP4-12Q9BQ66 201 aa6.96□□□□□ -1.3
SSH2-203ENST00000394848 HERC1Q15751 4861 aa6.93□□□□□ -1.3
SSH2-203ENST00000394848 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
SSH2-203ENST00000394848 KRTAP13-3Q3SY46 172 aa6.93□□□□□ -1.3
SSH2-203ENST00000394848 SEC61GP60059 68 aa6.92□□□□□ -1.3
SSH2-203ENST00000394848 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
SSH2-203ENST00000394848 ATP5EP56381 51 aaPredicted RBP6.9□□□□□ -1.3
SSH2-203ENST00000394848 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.31
SSH2-203ENST00000394848 FP248Q71RG6 208 aaPredicted RBP6.88□□□□□ -1.31
SSH2-203ENST00000394848 RPS28P62857 69 aaKnown RBP6.87□□□□□ -1.31
SSH2-203ENST00000394848 PCOTHQ58A44 107 aa6.87□□□□□ -1.31
SSH2-203ENST00000394848 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
SSH2-203ENST00000394848 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
SSH2-203ENST00000394848 A8MUU9 505 aa6.85□□□□□ -1.31
SSH2-203ENST00000394848 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
SSH2-203ENST00000394848 IGLV7-46A0A075B6I9 117 aa6.84□□□□□ -1.31
SSH2-203ENST00000394848 PRR4Q16378 134 aa6.84□□□□□ -1.31
SSH2-203ENST00000394848 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
SSH2-203ENST00000394848 IGKV2-30P06310 120 aa6.82□□□□□ -1.32
SSH2-203ENST00000394848 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
SSH2-203ENST00000394848 Q75L30 129 aa6.79□□□□□ -1.32
SSH2-203ENST00000394848 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
SSH2-203ENST00000394848 HRES1P13985 223 aa6.75□□□□□ -1.33
SSH2-203ENST00000394848 C7orf65Q6ZTY9 151 aa6.73□□□□□ -1.33
SSH2-203ENST00000394848 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
SSH2-203ENST00000394848 ATP11AUNQ6ZP68 121 aa6.72□□□□□ -1.33
SSH2-203ENST00000394848 RPL37P61927 97 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms