RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 NISCHQ9Y2I1 1504 aa28.59■■■□□ 2.17
SSH2-203ENST00000394848 CCDC180Q9P1Z9 1646 aa25.15■■□□□ 1.62
SSH2-203ENST00000394848 ABCC9O60706 1549 aa24.26■■□□□ 1.47
SSH2-203ENST00000394848 ZCCHC6Q5VYS8 1495 aaKnown RBP23.9■■□□□ 1.42
SSH2-203ENST00000394848 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
SSH2-203ENST00000394848 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
SSH2-203ENST00000394848 MYO15BQ96JP2 1530 aa23.64■■□□□ 1.38
SSH2-203ENST00000394848 NACADO15069 1562 aa23.6■■□□□ 1.37
SSH2-203ENST00000394848 RB1CC1Q8TDY2 1594 aa23.5■■□□□ 1.35
SSH2-203ENST00000394848 SHROOM4Q9ULL8 1493 aa23.09■■□□□ 1.29
SSH2-203ENST00000394848 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
SSH2-203ENST00000394848 UNC13AQ9UPW8 1703 aa22.89■■□□□ 1.25
SSH2-203ENST00000394848 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
SSH2-203ENST00000394848 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
SSH2-203ENST00000394848 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
SSH2-203ENST00000394848 CECR2Q9BXF3 1484 aa22.23■■□□□ 1.15
SSH2-203ENST00000394848 EIF4G1Q04637 1599 aaKnown RBP22.15■■□□□ 1.14
SSH2-203ENST00000394848 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
SSH2-203ENST00000394848 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
SSH2-203ENST00000394848 MROH2BQ7Z745 1585 aa22.04■■□□□ 1.12
SSH2-203ENST00000394848 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
SSH2-203ENST00000394848 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
SSH2-203ENST00000394848 CC2D2AQ9P2K1 1620 aa21.94■■□□□ 1.1
SSH2-203ENST00000394848 ATAD2BQ9ULI0 1458 aa21.88■■□□□ 1.09
SSH2-203ENST00000394848 PEG3Q9GZU2 1588 aa21.86■■□□□ 1.09
SSH2-203ENST00000394848 SMARCA2P51531 1590 aa21.84■■□□□ 1.09
SSH2-203ENST00000394848 NCAPD3P42695 1498 aa21.83■■□□□ 1.08
SSH2-203ENST00000394848 WIZO95785 1651 aa21.77■■□□□ 1.08
SSH2-203ENST00000394848 HMGXB3Q12766 1538 aa21.7■■□□□ 1.07
SSH2-203ENST00000394848 BAZ1BQ9UIG0 1483 aaKnown RBP21.7■■□□□ 1.06
SSH2-203ENST00000394848 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
SSH2-203ENST00000394848 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
SSH2-203ENST00000394848 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
SSH2-203ENST00000394848 CADPSQ9ULU8 1353 aa21.21■□□□□ 0.99
SSH2-203ENST00000394848 CFTRP13569 1480 aa21.17■□□□□ 0.98
SSH2-203ENST00000394848 NESP48681 1621 aa21.12■□□□□ 0.97
SSH2-203ENST00000394848 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
SSH2-203ENST00000394848 PDS5BQ9NTI5 1447 aa21.01■□□□□ 0.95
SSH2-203ENST00000394848 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
SSH2-203ENST00000394848 FANCD2Q9BXW9 1451 aa20.93■□□□□ 0.94
SSH2-203ENST00000394848 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
SSH2-203ENST00000394848 ERCC6Q03468 1493 aa20.87■□□□□ 0.93
SSH2-203ENST00000394848 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
SSH2-203ENST00000394848 KIF21AQ7Z4S6 1674 aa20.8■□□□□ 0.92
SSH2-203ENST00000394848 MRC2Q9UBG0 1479 aa20.74■□□□□ 0.91
SSH2-203ENST00000394848 WRNQ14191 1432 aaPredicted RBP eCLIP20.69■□□□□ 0.9
SSH2-203ENST00000394848 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
SSH2-203ENST00000394848 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
SSH2-203ENST00000394848 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
SSH2-203ENST00000394848 WDR62O43379 1518 aa20.65■□□□□ 0.9
SSH2-203ENST00000394848 CUX1P39880 1505 aa20.64■□□□□ 0.89
SSH2-203ENST00000394848 TOPBP1Q92547 1522 aa20.64■□□□□ 0.89
SSH2-203ENST00000394848 DNMBPQ6XZF7 1577 aa20.63■□□□□ 0.89
SSH2-203ENST00000394848 LOC105371045A0A1W2PR82 267 aa20.62■□□□□ 0.89
SSH2-203ENST00000394848 FAM9AQ8IZU1 332 aaPredicted RBP20.6■□□□□ 0.89
SSH2-203ENST00000394848 SYNJ1O43426 1573 aa20.57■□□□□ 0.88
SSH2-203ENST00000394848 TOP2BQ02880 1626 aa20.57■□□□□ 0.88
SSH2-203ENST00000394848 BIVM-ERCC5R4GMW8 1640 aa20.53■□□□□ 0.88
SSH2-203ENST00000394848 CUX2O14529 1486 aa20.51■□□□□ 0.87
SSH2-203ENST00000394848 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
SSH2-203ENST00000394848 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
SSH2-203ENST00000394848 SOGA1O94964 1423 aa20.44■□□□□ 0.86
SSH2-203ENST00000394848 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
SSH2-203ENST00000394848 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
SSH2-203ENST00000394848 TARBP1Q13395 1621 aaKnown RBP20.36■□□□□ 0.85
SSH2-203ENST00000394848 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
SSH2-203ENST00000394848 EEA1Q15075 1411 aa20.33■□□□□ 0.84
SSH2-203ENST00000394848 EHMT2Q96KQ7 1210 aa20.33■□□□□ 0.84
SSH2-203ENST00000394848 CSRNP3Q8WYN3 585 aa20.3■□□□□ 0.84
SSH2-203ENST00000394848 TDRD9Q8NDG6 1382 aaKnown RBP20.29■□□□□ 0.84
SSH2-203ENST00000394848 RUSC2Q8N2Y8 1516 aa20.29■□□□□ 0.84
SSH2-203ENST00000394848 ZNF608Q9ULD9 1512 aaPredicted RBP20.29■□□□□ 0.84
SSH2-203ENST00000394848 AEBP2Q6ZN18 517 aaPredicted RBP20.29■□□□□ 0.84
SSH2-203ENST00000394848 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
SSH2-203ENST00000394848 AQRO60306 1485 aaKnown RBP eCLIP20.24■□□□□ 0.83
SSH2-203ENST00000394848 KIF27Q86VH2 1401 aa20.23■□□□□ 0.83
SSH2-203ENST00000394848 GAPVD1Q14C86 1478 aa20.2■□□□□ 0.82
SSH2-203ENST00000394848 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
SSH2-203ENST00000394848 EIF4G3O43432 1585 aaKnown RBP20.17■□□□□ 0.82
SSH2-203ENST00000394848 GRIN2BQ13224 1484 aa20.14■□□□□ 0.81
SSH2-203ENST00000394848 IGF1RP08069 1367 aa20.13■□□□□ 0.81
SSH2-203ENST00000394848 ERICH3Q5RHP9 1530 aa20.09■□□□□ 0.81
SSH2-203ENST00000394848 UBTFP17480 764 aaKnown RBP20.07■□□□□ 0.8
SSH2-203ENST00000394848 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
SSH2-203ENST00000394848 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
SSH2-203ENST00000394848 MAGI1Q96QZ7 1491 aaPredicted RBP20.04■□□□□ 0.8
SSH2-203ENST00000394848 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
SSH2-203ENST00000394848 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
SSH2-203ENST00000394848 CARMIL1Q5VZK9 1371 aa20■□□□□ 0.79
SSH2-203ENST00000394848 FHAD1B1AJZ9 1412 aa19.99■□□□□ 0.79
SSH2-203ENST00000394848 KIF21BO75037 1637 aa19.99■□□□□ 0.79
SSH2-203ENST00000394848 SYNJ2O15056 1496 aa19.96■□□□□ 0.79
SSH2-203ENST00000394848 PRXQ9BXM0 1461 aa19.96■□□□□ 0.79
SSH2-203ENST00000394848 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
SSH2-203ENST00000394848 CHMP7Q8WUX9 453 aaPredicted RBP19.95■□□□□ 0.78
SSH2-203ENST00000394848 CUL7Q14999 1698 aa19.95■□□□□ 0.78
SSH2-203ENST00000394848 RAPGEF2Q9Y4G8 1499 aa19.94■□□□□ 0.78
SSH2-203ENST00000394848 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
SSH2-203ENST00000394848 FBLN2P98095 1184 aa19.92■□□□□ 0.78
SSH2-203ENST00000394848 GRIN2AQ12879 1464 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms