RNA–Protein interactions for RNA: ENST00000394744.6

RAB11FIP4-201, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2 BASIC

Gene RAB11FIP4, Length 1,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-201ENST00000394744 MP68P56378 58 aa11.55□□□□□ -0.56
RAB11FIP4-201ENST00000394744 NOTCH2NLQ7Z3S9 236 aa11.54□□□□□ -0.56
RAB11FIP4-201ENST00000394744 H0Y9P7 68 aa11.53□□□□□ -0.56
RAB11FIP4-201ENST00000394744 EPPK1P58107 5090 aaKnown RBP11.53□□□□□ -0.56
RAB11FIP4-201ENST00000394744 APOBP04114 4563 aaKnown RBP11.53□□□□□ -0.56
RAB11FIP4-201ENST00000394744 ATP5EP56381 51 aaPredicted RBP11.52□□□□□ -0.56
RAB11FIP4-201ENST00000394744 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
RAB11FIP4-201ENST00000394744 LINC00208Q96KT6 92 aa11.51□□□□□ -0.57
RAB11FIP4-201ENST00000394744 SMR3BP02814 79 aaPredicted RBP11.5□□□□□ -0.57
RAB11FIP4-201ENST00000394744 SERP1Q9Y6X1 66 aa11.5□□□□□ -0.57
RAB11FIP4-201ENST00000394744 MRPL34Q9BQ48 92 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP4-201ENST00000394744 Q5XG85 94 aa11.47□□□□□ -0.57
RAB11FIP4-201ENST00000394744 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
RAB11FIP4-201ENST00000394744 H3BPC8 53 aa11.45□□□□□ -0.58
RAB11FIP4-201ENST00000394744 TP53AIP1Q9HCN2 124 aa11.45□□□□□ -0.58
RAB11FIP4-201ENST00000394744 NDUFS5O43920 106 aa11.45□□□□□ -0.58
RAB11FIP4-201ENST00000394744 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
RAB11FIP4-201ENST00000394744 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
RAB11FIP4-201ENST00000394744 C1orf64Q8NEQ6 169 aa11.41□□□□□ -0.58
RAB11FIP4-201ENST00000394744 LIMD2Q9BT23 127 aa11.4□□□□□ -0.58
RAB11FIP4-201ENST00000394744 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
RAB11FIP4-201ENST00000394744 C8orf87E5RJ46 101 aa11.37□□□□□ -0.59
RAB11FIP4-201ENST00000394744 PRR26Q8N8Z3 221 aa11.37□□□□□ -0.59
RAB11FIP4-201ENST00000394744 FAT1Q14517 4588 aa11.37□□□□□ -0.59
RAB11FIP4-201ENST00000394744 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
RAB11FIP4-201ENST00000394744 HSPG2P98160 4391 aa11.34□□□□□ -0.59
RAB11FIP4-201ENST00000394744 PRR4Q16378 134 aa11.34□□□□□ -0.59
RAB11FIP4-201ENST00000394744 SPINK1P00995 79 aa11.33□□□□□ -0.6
RAB11FIP4-201ENST00000394744 LINC00313P59037 77 aa11.32□□□□□ -0.6
RAB11FIP4-201ENST00000394744 KIAA1109Q2LD37 5005 aa11.32□□□□□ -0.6
RAB11FIP4-201ENST00000394744 RYR1P21817 5038 aa11.31□□□□□ -0.6
RAB11FIP4-201ENST00000394744 LINC00304Q8N9R0 145 aa11.29□□□□□ -0.6
RAB11FIP4-201ENST00000394744 CYP4F30PQ9H0H9 118 aa11.29□□□□□ -0.6
RAB11FIP4-201ENST00000394744 SMIM26A0A096LP01 95 aa11.26□□□□□ -0.61
RAB11FIP4-201ENST00000394744 Q5W150 140 aa11.26□□□□□ -0.61
RAB11FIP4-201ENST00000394744 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
RAB11FIP4-201ENST00000394744 PCOTHQ58A44 107 aa11.24□□□□□ -0.61
RAB11FIP4-201ENST00000394744 KRTAP13-3Q3SY46 172 aa11.23□□□□□ -0.61
RAB11FIP4-201ENST00000394744 KRTAP17-1Q9BYP8 105 aa11.23□□□□□ -0.61
RAB11FIP4-201ENST00000394744 RPS29P62273 56 aaKnown RBP11.22□□□□□ -0.61
RAB11FIP4-201ENST00000394744 SPAG11AQ6PDA7 123 aa11.22□□□□□ -0.61
RAB11FIP4-201ENST00000394744 FP248Q71RG6 208 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP4-201ENST00000394744 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
RAB11FIP4-201ENST00000394744 KRTAP16-1A8MUX0 517 aa11.21□□□□□ -0.61
RAB11FIP4-201ENST00000394744 C4orf26Q17RF5 130 aa11.18□□□□□ -0.62
RAB11FIP4-201ENST00000394744 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
RAB11FIP4-201ENST00000394744 IGLV7-46A0A075B6I9 117 aa11.16□□□□□ -0.62
RAB11FIP4-201ENST00000394744 LOC101927531A0A1B0GV80 90 aa11.16□□□□□ -0.62
RAB11FIP4-201ENST00000394744 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
RAB11FIP4-201ENST00000394744 FAM229AH3BQW9 127 aa11.13□□□□□ -0.63
RAB11FIP4-201ENST00000394744 Q5VSD8 79 aa11.12□□□□□ -0.63
RAB11FIP4-201ENST00000394744 BIRC6Q9NR09 4857 aa11.11□□□□□ -0.63
RAB11FIP4-201ENST00000394744 MPLKIPQ8TAP9 179 aa11.08□□□□□ -0.64
RAB11FIP4-201ENST00000394744 Q8N1X5 172 aa11.05□□□□□ -0.64
RAB11FIP4-201ENST00000394744 IGKV2-30P06310 120 aa11□□□□□ -0.65
RAB11FIP4-201ENST00000394744 COA5Q86WW8 74 aa11□□□□□ -0.65
RAB11FIP4-201ENST00000394744 KRTAP4-5Q9BYR2 181 aa10.96□□□□□ -0.66
RAB11FIP4-201ENST00000394744 C9orf92A6NGG3 77 aa10.95□□□□□ -0.66
RAB11FIP4-201ENST00000394744 HRES1P13985 223 aa10.95□□□□□ -0.66
RAB11FIP4-201ENST00000394744 Q1T7F1 81 aa10.94□□□□□ -0.66
RAB11FIP4-201ENST00000394744 HERC2O95714 4834 aa10.93□□□□□ -0.66
RAB11FIP4-201ENST00000394744 LRP1Q07954 4544 aaKnown RBP10.93□□□□□ -0.66
RAB11FIP4-201ENST00000394744 IGKV2D-30A0A075B6S6 120 aa10.92□□□□□ -0.66
RAB11FIP4-201ENST00000394744 KRTAP10-8P60410 259 aa10.9□□□□□ -0.66
RAB11FIP4-201ENST00000394744 TNXBP22105 4242 aa10.89□□□□□ -0.67
RAB11FIP4-201ENST00000394744 FLG2Q5D862 2391 aaPredicted RBP10.89□□□□□ -0.67
RAB11FIP4-201ENST00000394744 MYCBP2O75592 4640 aa10.88□□□□□ -0.67
RAB11FIP4-201ENST00000394744 ABCA13Q86UQ4 5058 aa10.85□□□□□ -0.67
RAB11FIP4-201ENST00000394744 C20orf166-AS1Q96NR2 134 aa10.85□□□□□ -0.67
RAB11FIP4-201ENST00000394744 FAT3Q8TDW7 4589 aa10.84□□□□□ -0.67
RAB11FIP4-201ENST00000394744 A8MUU9 505 aa10.84□□□□□ -0.67
RAB11FIP4-201ENST00000394744 DMAC1Q96GE9 116 aa10.83□□□□□ -0.68
RAB11FIP4-201ENST00000394744 V9GYY9 64 aa10.82□□□□□ -0.68
RAB11FIP4-201ENST00000394744 PSPHP1O15172 72 aa10.81□□□□□ -0.68
RAB11FIP4-201ENST00000394744 ACYP2P14621 99 aa10.81□□□□□ -0.68
RAB11FIP4-201ENST00000394744 C7orf65Q6ZTY9 151 aa10.77□□□□□ -0.68
RAB11FIP4-201ENST00000394744 A8MUN3 132 aa10.76□□□□□ -0.69
RAB11FIP4-201ENST00000394744 MT1HL1P0DM35 61 aa10.69□□□□□ -0.7
RAB11FIP4-201ENST00000394744 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
RAB11FIP4-201ENST00000394744 CHKB-CPT1BH3BT56 60 aa10.68□□□□□ -0.7
RAB11FIP4-201ENST00000394744 Q5VV11 94 aa10.68□□□□□ -0.7
RAB11FIP4-201ENST00000394744 Q75L30 129 aa10.67□□□□□ -0.7
RAB11FIP4-201ENST00000394744 SVIPQ8NHG7 77 aa10.66□□□□□ -0.7
RAB11FIP4-201ENST00000394744 BRK1Q8WUW1 75 aa10.66□□□□□ -0.7
RAB11FIP4-201ENST00000394744 LINC01558Q9Y6Z2 57 aa10.66□□□□□ -0.7
RAB11FIP4-201ENST00000394744 DMBT1Q9UGM3 2413 aaPredicted RBP10.63□□□□□ -0.71
RAB11FIP4-201ENST00000394744 PCLOQ9Y6V0 5065 aa10.63□□□□□ -0.71
RAB11FIP4-201ENST00000394744 SPINK7P58062 85 aa10.58□□□□□ -0.72
RAB11FIP4-201ENST00000394744 PRO0628Q9UI54 55 aa10.58□□□□□ -0.72
RAB11FIP4-201ENST00000394744 XP32Q5T750 250 aa10.52□□□□□ -0.73
RAB11FIP4-201ENST00000394744 ATP11AUNQ6ZP68 121 aa10.51□□□□□ -0.73
RAB11FIP4-201ENST00000394744 RPL37P61927 97 aaKnown RBP10.5□□□□□ -0.73
RAB11FIP4-201ENST00000394744 KRTAP3-1Q9BYR8 98 aa10.46□□□□□ -0.73
RAB11FIP4-201ENST00000394744 J3QL48 77 aa10.45□□□□□ -0.74
RAB11FIP4-201ENST00000394744 A6NED7 52 aa10.43□□□□□ -0.74
RAB11FIP4-201ENST00000394744 A8MU10 97 aa10.41□□□□□ -0.74
RAB11FIP4-201ENST00000394744 A0A1B0GU69 56 aa10.37□□□□□ -0.75
RAB11FIP4-201ENST00000394744 COX6B2Q6YFQ2 88 aa10.37□□□□□ -0.75
RAB11FIP4-201ENST00000394744 LCA10Q71F78 164 aa10.34□□□□□ -0.75
RAB11FIP4-201ENST00000394744 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms