RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 CDK2AP2O75956 126 aa8.23□□□□□ -1.09
RNF41-202ENST00000394013 LINC00208Q96KT6 92 aa8.23□□□□□ -1.09
RNF41-202ENST00000394013 PRR4Q16378 134 aa8.22□□□□□ -1.09
RNF41-202ENST00000394013 H0Y9P7 68 aa8.21□□□□□ -1.09
RNF41-202ENST00000394013 NDUFS5O43920 106 aa8.21□□□□□ -1.09
RNF41-202ENST00000394013 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.09
RNF41-202ENST00000394013 FAM229BQ4G0N7 80 aa8.21□□□□□ -1.09
RNF41-202ENST00000394013 KRTAP10-4P60372 401 aaPredicted RBP8.21□□□□□ -1.1
RNF41-202ENST00000394013 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
RNF41-202ENST00000394013 CD164Q04900 197 aa8.2□□□□□ -1.1
RNF41-202ENST00000394013 C1orf195Q5TG92 126 aa8.2□□□□□ -1.1
RNF41-202ENST00000394013 TYMSOSQ8TAI1 123 aa8.2□□□□□ -1.1
RNF41-202ENST00000394013 LRP1Q07954 4544 aaKnown RBP8.18□□□□□ -1.1
RNF41-202ENST00000394013 HSPG2P98160 4391 aa8.18□□□□□ -1.1
RNF41-202ENST00000394013 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
RNF41-202ENST00000394013 NDUFC1O43677 76 aa8.17□□□□□ -1.1
RNF41-202ENST00000394013 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
RNF41-202ENST00000394013 MP68P56378 58 aa8.15□□□□□ -1.1
RNF41-202ENST00000394013 C1orf64Q8NEQ6 169 aa8.13□□□□□ -1.11
RNF41-202ENST00000394013 TRAV22A0A0B4J277 110 aa8.13□□□□□ -1.11
RNF41-202ENST00000394013 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
RNF41-202ENST00000394013 Q5W150 140 aa8.12□□□□□ -1.11
RNF41-202ENST00000394013 RETNLBQ9BQ08 111 aa8.12□□□□□ -1.11
RNF41-202ENST00000394013 KRTAP17-1Q9BYP8 105 aa8.12□□□□□ -1.11
RNF41-202ENST00000394013 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
RNF41-202ENST00000394013 PCOTHQ58A44 107 aa8.1□□□□□ -1.11
RNF41-202ENST00000394013 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
RNF41-202ENST00000394013 SERP1Q9Y6X1 66 aa8.09□□□□□ -1.11
RNF41-202ENST00000394013 EPPK1P58107 5090 aaKnown RBP8.09□□□□□ -1.11
RNF41-202ENST00000394013 LINC00304Q8N9R0 145 aa8.08□□□□□ -1.12
RNF41-202ENST00000394013 FLG2Q5D862 2391 aaPredicted RBP8.07□□□□□ -1.12
RNF41-202ENST00000394013 LINC00313P59037 77 aa8.07□□□□□ -1.12
RNF41-202ENST00000394013 Q5XG85 94 aa8.07□□□□□ -1.12
RNF41-202ENST00000394013 RYR1P21817 5038 aa8.07□□□□□ -1.12
RNF41-202ENST00000394013 LIMD2Q9BT23 127 aa8.04□□□□□ -1.12
RNF41-202ENST00000394013 TP53AIP1Q9HCN2 124 aa8.04□□□□□ -1.12
RNF41-202ENST00000394013 SPINK1P00995 79 aa8.04□□□□□ -1.12
RNF41-202ENST00000394013 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
RNF41-202ENST00000394013 TNXBP22105 4242 aa8.02□□□□□ -1.13
RNF41-202ENST00000394013 C4orf26Q17RF5 130 aa8.02□□□□□ -1.13
RNF41-202ENST00000394013 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
RNF41-202ENST00000394013 FP248Q71RG6 208 aaPredicted RBP8.02□□□□□ -1.13
RNF41-202ENST00000394013 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
RNF41-202ENST00000394013 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
RNF41-202ENST00000394013 C8orf87E5RJ46 101 aa8□□□□□ -1.13
RNF41-202ENST00000394013 H3BPC8 53 aa7.98□□□□□ -1.13
RNF41-202ENST00000394013 Q5VSD8 79 aa7.97□□□□□ -1.13
RNF41-202ENST00000394013 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.13
RNF41-202ENST00000394013 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
RNF41-202ENST00000394013 MPLKIPQ8TAP9 179 aa7.95□□□□□ -1.14
RNF41-202ENST00000394013 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
RNF41-202ENST00000394013 FAT3Q8TDW7 4589 aa7.94□□□□□ -1.14
RNF41-202ENST00000394013 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
RNF41-202ENST00000394013 FAM229AH3BQW9 127 aa7.93□□□□□ -1.14
RNF41-202ENST00000394013 Q8N1X5 172 aa7.93□□□□□ -1.14
RNF41-202ENST00000394013 SMIM26A0A096LP01 95 aa7.91□□□□□ -1.14
RNF41-202ENST00000394013 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
RNF41-202ENST00000394013 SPANXA2-OT1Q8N9U9 137 aa7.9□□□□□ -1.15
RNF41-202ENST00000394013 IGLV7-46A0A075B6I9 117 aa7.89□□□□□ -1.15
RNF41-202ENST00000394013 RPS29P62273 56 aaKnown RBP7.87□□□□□ -1.15
RNF41-202ENST00000394013 LOC101927531A0A1B0GV80 90 aa7.86□□□□□ -1.15
RNF41-202ENST00000394013 IGKV2D-30A0A075B6S6 120 aa7.85□□□□□ -1.15
RNF41-202ENST00000394013 IGKV2-30P06310 120 aa7.85□□□□□ -1.15
RNF41-202ENST00000394013 HRES1P13985 223 aa7.83□□□□□ -1.16
RNF41-202ENST00000394013 COA5Q86WW8 74 aa7.83□□□□□ -1.16
RNF41-202ENST00000394013 KRTAP10-8P60410 259 aa7.82□□□□□ -1.16
RNF41-202ENST00000394013 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
RNF41-202ENST00000394013 PSPHP1O15172 72 aa7.76□□□□□ -1.17
RNF41-202ENST00000394013 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
RNF41-202ENST00000394013 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.18
RNF41-202ENST00000394013 A8MUU9 505 aa7.71□□□□□ -1.18
RNF41-202ENST00000394013 C20orf166-AS1Q96NR2 134 aa7.71□□□□□ -1.18
RNF41-202ENST00000394013 A8MUN3 132 aa7.7□□□□□ -1.18
RNF41-202ENST00000394013 Q1T7F1 81 aa7.7□□□□□ -1.18
RNF41-202ENST00000394013 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
RNF41-202ENST00000394013 LPAP08519 4548 aa7.65□□□□□ -1.19
RNF41-202ENST00000394013 C7orf65Q6ZTY9 151 aa7.64□□□□□ -1.19
RNF41-202ENST00000394013 ACYP2P14621 99 aa7.62□□□□□ -1.19
RNF41-202ENST00000394013 PRR15LQ9BU68 103 aa7.62□□□□□ -1.19
RNF41-202ENST00000394013 LRP2P98164 4655 aa7.61□□□□□ -1.19
RNF41-202ENST00000394013 Q5VV11 94 aa7.6□□□□□ -1.19
RNF41-202ENST00000394013 A8MU10 97 aa7.59□□□□□ -1.19
RNF41-202ENST00000394013 SPINK7P58062 85 aa7.59□□□□□ -1.19
RNF41-202ENST00000394013 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
RNF41-202ENST00000394013 CHKB-CPT1BH3BT56 60 aa7.57□□□□□ -1.2
RNF41-202ENST00000394013 Q75L30 129 aa7.57□□□□□ -1.2
RNF41-202ENST00000394013 XP32Q5T750 250 aa7.56□□□□□ -1.2
RNF41-202ENST00000394013 KRTAP3-1Q9BYR8 98 aa7.56□□□□□ -1.2
RNF41-202ENST00000394013 HERC2O95714 4834 aa7.55□□□□□ -1.2
RNF41-202ENST00000394013 V9GYY9 64 aa7.51□□□□□ -1.21
RNF41-202ENST00000394013 LINC01558Q9Y6Z2 57 aa7.51□□□□□ -1.21
RNF41-202ENST00000394013 RPL37P61927 97 aaKnown RBP7.49□□□□□ -1.21
RNF41-202ENST00000394013 ATP11AUNQ6ZP68 121 aa7.49□□□□□ -1.21
RNF41-202ENST00000394013 BIRC6Q9NR09 4857 aa7.46□□□□□ -1.21
RNF41-202ENST00000394013 PRO0628Q9UI54 55 aa7.42□□□□□ -1.22
RNF41-202ENST00000394013 A6NED7 52 aa7.4□□□□□ -1.22
RNF41-202ENST00000394013 SEC61GP60059 68 aa7.4□□□□□ -1.22
RNF41-202ENST00000394013 LCA10Q71F78 164 aa7.39□□□□□ -1.23
RNF41-202ENST00000394013 COX6B2Q6YFQ2 88 aa7.36□□□□□ -1.23
RNF41-202ENST00000394013 A0A1B0GU69 56 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms