RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 SPINK1P00995 79 aa12.77□□□□□ -0.37
HMGA2-203ENST00000393578 C1orf195Q5TG92 126 aa12.75□□□□□ -0.37
HMGA2-203ENST00000393578 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
HMGA2-203ENST00000393578 C5orf47Q569G3 176 aa12.74□□□□□ -0.37
HMGA2-203ENST00000393578 A0A0U1RQV1 116 aa12.73□□□□□ -0.37
HMGA2-203ENST00000393578 TMEM258P61165 79 aa12.72□□□□□ -0.37
HMGA2-203ENST00000393578 LINC00304Q8N9R0 145 aa12.71□□□□□ -0.37
HMGA2-203ENST00000393578 SPAG11AQ6PDA7 123 aa12.7□□□□□ -0.38
HMGA2-203ENST00000393578 H7BZZ5 65 aa12.69□□□□□ -0.38
HMGA2-203ENST00000393578 NDUFC1O43677 76 aa12.69□□□□□ -0.38
HMGA2-203ENST00000393578 NOTCH2NLQ7Z3S9 236 aa12.69□□□□□ -0.38
HMGA2-203ENST00000393578 RPS29P62273 56 aaKnown RBP12.69□□□□□ -0.38
HMGA2-203ENST00000393578 C8orf87E5RJ46 101 aa12.65□□□□□ -0.38
HMGA2-203ENST00000393578 MRPL34Q9BQ48 92 aaKnown RBP12.65□□□□□ -0.38
HMGA2-203ENST00000393578 TP53AIP1Q9HCN2 124 aa12.64□□□□□ -0.39
HMGA2-203ENST00000393578 HSPG2P98160 4391 aa12.64□□□□□ -0.39
HMGA2-203ENST00000393578 MP68P56378 58 aa12.63□□□□□ -0.39
HMGA2-203ENST00000393578 PKHD1L1Q86WI1 4243 aa12.62□□□□□ -0.39
HMGA2-203ENST00000393578 Q5VSD8 79 aa12.62□□□□□ -0.39
HMGA2-203ENST00000393578 ZCCHC13Q8WW36 166 aaKnown RBP12.6□□□□□ -0.39
HMGA2-203ENST00000393578 H0Y9P7 68 aa12.58□□□□□ -0.4
HMGA2-203ENST00000393578 LINC00313P59037 77 aa12.58□□□□□ -0.4
HMGA2-203ENST00000393578 NDUFS5O43920 106 aa12.58□□□□□ -0.4
HMGA2-203ENST00000393578 RYR1P21817 5038 aa12.57□□□□□ -0.4
HMGA2-203ENST00000393578 TRAV22A0A0B4J277 110 aa12.56□□□□□ -0.4
HMGA2-203ENST00000393578 H3BPC8 53 aa12.56□□□□□ -0.4
HMGA2-203ENST00000393578 LINC00208Q96KT6 92 aa12.53□□□□□ -0.4
HMGA2-203ENST00000393578 FAM236DA0A1B0GTK5 79 aa12.52□□□□□ -0.4
HMGA2-203ENST00000393578 FAM236CP0DP71 79 aa12.52□□□□□ -0.4
HMGA2-203ENST00000393578 KRTAP17-1Q9BYP8 105 aa12.49□□□□□ -0.41
HMGA2-203ENST00000393578 C1orf64Q8NEQ6 169 aa12.47□□□□□ -0.41
HMGA2-203ENST00000393578 ATP5EP56381 51 aaPredicted RBP12.45□□□□□ -0.42
HMGA2-203ENST00000393578 EPPK1P58107 5090 aaKnown RBP12.45□□□□□ -0.42
HMGA2-203ENST00000393578 Q8N9P0 234 aaPredicted RBP12.45□□□□□ -0.42
HMGA2-203ENST00000393578 KRTAP16-1A8MUX0 517 aa12.44□□□□□ -0.42
HMGA2-203ENST00000393578 KRTAP10-8P60410 259 aa12.42□□□□□ -0.42
HMGA2-203ENST00000393578 RPS28P62857 69 aaKnown RBP12.41□□□□□ -0.42
HMGA2-203ENST00000393578 KIAA1109Q2LD37 5005 aa12.41□□□□□ -0.42
HMGA2-203ENST00000393578 Q8N1X5 172 aa12.41□□□□□ -0.42
HMGA2-203ENST00000393578 KRTAP13-3Q3SY46 172 aa12.36□□□□□ -0.43
HMGA2-203ENST00000393578 Q5W150 140 aa12.36□□□□□ -0.43
HMGA2-203ENST00000393578 LRP1Q07954 4544 aaKnown RBP12.33□□□□□ -0.44
HMGA2-203ENST00000393578 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
HMGA2-203ENST00000393578 TNXBP22105 4242 aa12.31□□□□□ -0.44
HMGA2-203ENST00000393578 FLG2Q5D862 2391 aaPredicted RBP12.31□□□□□ -0.44
HMGA2-203ENST00000393578 LOC101927531A0A1B0GV80 90 aa12.29□□□□□ -0.44
HMGA2-203ENST00000393578 RETNLBQ9BQ08 111 aa12.29□□□□□ -0.44
HMGA2-203ENST00000393578 SPANXA2-OT1Q8N9U9 137 aa12.27□□□□□ -0.44
HMGA2-203ENST00000393578 FAT3Q8TDW7 4589 aa12.27□□□□□ -0.44
HMGA2-203ENST00000393578 OXTP01178 125 aa12.24□□□□□ -0.45
HMGA2-203ENST00000393578 CYP4F30PQ9H0H9 118 aa12.23□□□□□ -0.45
HMGA2-203ENST00000393578 PCOTHQ58A44 107 aa12.22□□□□□ -0.45
HMGA2-203ENST00000393578 C9orf92A6NGG3 77 aa12.19□□□□□ -0.46
HMGA2-203ENST00000393578 PRR4Q16378 134 aa12.19□□□□□ -0.46
HMGA2-203ENST00000393578 MT1HL1P0DM35 61 aa12.18□□□□□ -0.46
HMGA2-203ENST00000393578 IGLV7-46A0A075B6I9 117 aa12.17□□□□□ -0.46
HMGA2-203ENST00000393578 C20orf166-AS1Q96NR2 134 aa12.14□□□□□ -0.47
HMGA2-203ENST00000393578 IGKV2-30P06310 120 aa12.13□□□□□ -0.47
HMGA2-203ENST00000393578 FP248Q71RG6 208 aaPredicted RBP12.13□□□□□ -0.47
HMGA2-203ENST00000393578 A8MUU9 505 aa12.12□□□□□ -0.47
HMGA2-203ENST00000393578 MYCBP2O75592 4640 aa12.11□□□□□ -0.47
HMGA2-203ENST00000393578 DMBT1Q9UGM3 2413 aaPredicted RBP12.1□□□□□ -0.47
HMGA2-203ENST00000393578 KRTAP4-5Q9BYR2 181 aa12.09□□□□□ -0.47
HMGA2-203ENST00000393578 SMIM26A0A096LP01 95 aa12.03□□□□□ -0.48
HMGA2-203ENST00000393578 IGKV2D-30A0A075B6S6 120 aa12.02□□□□□ -0.49
HMGA2-203ENST00000393578 HRES1P13985 223 aa11.99□□□□□ -0.49
HMGA2-203ENST00000393578 Q75L30 129 aa11.99□□□□□ -0.49
HMGA2-203ENST00000393578 C7orf65Q6ZTY9 151 aa11.95□□□□□ -0.5
HMGA2-203ENST00000393578 BIRC6Q9NR09 4857 aa11.92□□□□□ -0.5
HMGA2-203ENST00000393578 COA5Q86WW8 74 aa11.91□□□□□ -0.5
HMGA2-203ENST00000393578 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
HMGA2-203ENST00000393578 ACYP2P14621 99 aa11.84□□□□□ -0.51
HMGA2-203ENST00000393578 XP32Q5T750 250 aa11.84□□□□□ -0.51
HMGA2-203ENST00000393578 HERC2O95714 4834 aa11.83□□□□□ -0.52
HMGA2-203ENST00000393578 RPL37P61927 97 aaKnown RBP11.82□□□□□ -0.52
HMGA2-203ENST00000393578 ATP11AUNQ6ZP68 121 aa11.81□□□□□ -0.52
HMGA2-203ENST00000393578 ABCA13Q86UQ4 5058 aa11.8□□□□□ -0.52
HMGA2-203ENST00000393578 MPLKIPQ8TAP9 179 aa11.79□□□□□ -0.52
HMGA2-203ENST00000393578 SPINK7P58062 85 aa11.78□□□□□ -0.52
HMGA2-203ENST00000393578 C4orf26Q17RF5 130 aa11.77□□□□□ -0.53
HMGA2-203ENST00000393578 Q1T7F1 81 aa11.75□□□□□ -0.53
HMGA2-203ENST00000393578 TPRXLQ17RH7 258 aa11.74□□□□□ -0.53
HMGA2-203ENST00000393578 J3QL48 77 aa11.7□□□□□ -0.54
HMGA2-203ENST00000393578 A8MUN3 132 aa11.68□□□□□ -0.54
HMGA2-203ENST00000393578 V9GYY9 64 aa11.68□□□□□ -0.54
HMGA2-203ENST00000393578 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.55
HMGA2-203ENST00000393578 KRTAP3-1Q9BYR8 98 aa11.54□□□□□ -0.56
HMGA2-203ENST00000393578 PSPHP1O15172 72 aa11.52□□□□□ -0.56
HMGA2-203ENST00000393578 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
HMGA2-203ENST00000393578 LINC01558Q9Y6Z2 57 aa11.51□□□□□ -0.57
HMGA2-203ENST00000393578 LPAP08519 4548 aa11.46□□□□□ -0.57
HMGA2-203ENST00000393578 PRR15LQ9BU68 103 aa11.46□□□□□ -0.58
HMGA2-203ENST00000393578 LRP2P98164 4655 aa11.44□□□□□ -0.58
HMGA2-203ENST00000393578 Q5VV11 94 aa11.41□□□□□ -0.58
HMGA2-203ENST00000393578 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
HMGA2-203ENST00000393578 SEC61BP60468 96 aaKnown RBP11.33□□□□□ -0.6
HMGA2-203ENST00000393578 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
HMGA2-203ENST00000393578 A0A1B0GU69 56 aa11.26□□□□□ -0.61
HMGA2-203ENST00000393578 BRK1Q8WUW1 75 aa11.24□□□□□ -0.61
HMGA2-203ENST00000393578 RBM12B-AS1Q9P1G2 102 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms