RNA–Protein interactions for RNA: ENST00000393561.5

LAMB1-204, Transcript of laminin subunit beta 1, humanhuman

TSL 5 BASIC

Gene LAMB1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-204ENST00000393561 VPS13AQ96RL7 3174 aa6.42□□□□□ -1.38
LAMB1-204ENST00000393561 FRYLO94915 3013 aa6.4□□□□□ -1.39
LAMB1-204ENST00000393561 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
LAMB1-204ENST00000393561 ITPR1Q14643 2758 aa6.38□□□□□ -1.39
LAMB1-204ENST00000393561 KRTAP16-1A8MUX0 517 aa6.37□□□□□ -1.39
LAMB1-204ENST00000393561 FRYQ5TBA9 3013 aa6.37□□□□□ -1.39
LAMB1-204ENST00000393561 TNP1P09430 55 aa6.35□□□□□ -1.39
LAMB1-204ENST00000393561 KRTAP1-4P0C5Y4 121 aa6.29□□□□□ -1.4
LAMB1-204ENST00000393561 ASPMQ8IZT6 3477 aa6.27□□□□□ -1.41
LAMB1-204ENST00000393561 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
LAMB1-204ENST00000393561 XP32Q5T750 250 aa6.26□□□□□ -1.41
LAMB1-204ENST00000393561 FREM2Q5SZK8 3169 aa6.25□□□□□ -1.41
LAMB1-204ENST00000393561 CELSR3Q9NYQ7 3312 aa6.25□□□□□ -1.41
LAMB1-204ENST00000393561 UTP20O75691 2785 aaKnown RBP6.25□□□□□ -1.41
LAMB1-204ENST00000393561 APCP25054 2843 aa6.24□□□□□ -1.41
LAMB1-204ENST00000393561 FLNCQ14315 2725 aa6.23□□□□□ -1.41
LAMB1-204ENST00000393561 KALRNO60229 2985 aa6.22□□□□□ -1.41
LAMB1-204ENST00000393561 PP632Q6XCG6 107 aa6.21□□□□□ -1.41
LAMB1-204ENST00000393561 HIVEP1P15822 2718 aa6.21□□□□□ -1.42
LAMB1-204ENST00000393561 C10orf95Q9H7T3 257 aa6.2□□□□□ -1.42
LAMB1-204ENST00000393561 TACC2O95359 2948 aa6.19□□□□□ -1.42
LAMB1-204ENST00000393561 ATMQ13315 3056 aa6.18□□□□□ -1.42
LAMB1-204ENST00000393561 SPENQ96T58 3664 aaKnown RBP6.18□□□□□ -1.42
LAMB1-204ENST00000393561 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
LAMB1-204ENST00000393561 NIPBLQ6KC79 2804 aaeCLIP6.15□□□□□ -1.42
LAMB1-204ENST00000393561 ZFHX4Q86UP3 3567 aa6.13□□□□□ -1.43
LAMB1-204ENST00000393561 COL12A1Q99715 3063 aa6.13□□□□□ -1.43
LAMB1-204ENST00000393561 LAMA5O15230 3695 aa6.12□□□□□ -1.43
LAMB1-204ENST00000393561 KRTAP10-8P60410 259 aa6.12□□□□□ -1.43
LAMB1-204ENST00000393561 LRBAP50851 2863 aa6.12□□□□□ -1.43
LAMB1-204ENST00000393561 H0YAA0 97 aa6.12□□□□□ -1.43
LAMB1-204ENST00000393561 TENM4Q6N022 2769 aa6.12□□□□□ -1.43
LAMB1-204ENST00000393561 CFAP47Q6ZTR5 3102 aa6.1□□□□□ -1.43
LAMB1-204ENST00000393561 DMXL2Q8TDJ6 3036 aa6.09□□□□□ -1.43
LAMB1-204ENST00000393561 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
LAMB1-204ENST00000393561 ASH1LQ9NR48 2969 aaKnown RBP6.08□□□□□ -1.44
LAMB1-204ENST00000393561 ADGRG4Q8IZF6 3080 aa6.06□□□□□ -1.44
LAMB1-204ENST00000393561 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
LAMB1-204ENST00000393561 KRTAP13-3Q3SY46 172 aa6.04□□□□□ -1.44
LAMB1-204ENST00000393561 DMXL1Q9Y485 3027 aa6.03□□□□□ -1.44
LAMB1-204ENST00000393561 P0C880 135 aa6.03□□□□□ -1.44
LAMB1-204ENST00000393561 NBEAQ8NFP9 2946 aa6.02□□□□□ -1.45
LAMB1-204ENST00000393561 CELSR2Q9HCU4 2923 aa6.01□□□□□ -1.45
LAMB1-204ENST00000393561 CRYBG3Q68DQ2 2970 aa6□□□□□ -1.45
LAMB1-204ENST00000393561 DCHS1Q96JQ0 3298 aa5.99□□□□□ -1.45
LAMB1-204ENST00000393561 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
LAMB1-204ENST00000393561 BOD1L1Q8NFC6 3051 aa5.98□□□□□ -1.45
LAMB1-204ENST00000393561 ZZEF1O43149 2961 aa5.97□□□□□ -1.45
LAMB1-204ENST00000393561 PRO2289Q9P1D8 64 aa5.96□□□□□ -1.45
LAMB1-204ENST00000393561 DCHS2Q6V1P9 2916 aa5.95□□□□□ -1.46
LAMB1-204ENST00000393561 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
LAMB1-204ENST00000393561 ZANQ9Y493 2812 aa5.89□□□□□ -1.47
LAMB1-204ENST00000393561 SMG1Q96Q15 3661 aaKnown RBP5.87□□□□□ -1.47
LAMB1-204ENST00000393561 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
LAMB1-204ENST00000393561 TENM1Q9UKZ4 2725 aa5.81□□□□□ -1.48
LAMB1-204ENST00000393561 TENM3Q9P273 2699 aa5.81□□□□□ -1.48
LAMB1-204ENST00000393561 RELNP78509 3460 aa5.8□□□□□ -1.48
LAMB1-204ENST00000393561 NF1P21359 2839 aa5.79□□□□□ -1.48
LAMB1-204ENST00000393561 TENM2Q9NT68 2774 aa5.77□□□□□ -1.49
LAMB1-204ENST00000393561 TGP01266 2768 aa5.75□□□□□ -1.49
LAMB1-204ENST00000393561 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
LAMB1-204ENST00000393561 FBN2P35556 2912 aa5.75□□□□□ -1.49
LAMB1-204ENST00000393561 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
LAMB1-204ENST00000393561 CELSR1Q9NYQ6 3014 aa5.67□□□□□ -1.5
LAMB1-204ENST00000393561 KRTAP12-1P59990 96 aa5.67□□□□□ -1.5
LAMB1-204ENST00000393561 VPS13CQ709C8 3753 aa5.65□□□□□ -1.5
LAMB1-204ENST00000393561 SVEP1Q4LDE5 3571 aa5.65□□□□□ -1.5
LAMB1-204ENST00000393561 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
LAMB1-204ENST00000393561 KRTAP3-1Q9BYR8 98 aa5.63□□□□□ -1.51
LAMB1-204ENST00000393561 ZFHX3Q15911 3703 aa5.62□□□□□ -1.51
LAMB1-204ENST00000393561 CSMD1Q96PZ7 3565 aa5.57□□□□□ -1.52
LAMB1-204ENST00000393561 CSMD2Q7Z408 3487 aa5.54□□□□□ -1.52
LAMB1-204ENST00000393561 PKD1L1Q8TDX9 2849 aa5.51□□□□□ -1.53
LAMB1-204ENST00000393561 KRTAP10-6P60371 365 aaPredicted RBP5.48□□□□□ -1.53
LAMB1-204ENST00000393561 PDZD2O15018 2839 aa5.47□□□□□ -1.53
LAMB1-204ENST00000393561 KRTAP15-1Q3LI76 137 aa5.45□□□□□ -1.54
LAMB1-204ENST00000393561 VWFP04275 2813 aa5.44□□□□□ -1.54
LAMB1-204ENST00000393561 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
LAMB1-204ENST00000393561 ANK3Q12955 4377 aaKnown RBP5.37□□□□□ -1.55
LAMB1-204ENST00000393561 MT1HL1P0DM35 61 aa5.35□□□□□ -1.55
LAMB1-204ENST00000393561 ZNF469Q96JG9 3925 aaPredicted RBP5.35□□□□□ -1.55
LAMB1-204ENST00000393561 CUBNO60494 3623 aa5.33□□□□□ -1.56
LAMB1-204ENST00000393561 KRTAP3-2Q9BYR7 98 aa5.28□□□□□ -1.56
LAMB1-204ENST00000393561 OTOGQ6ZRI0 2925 aa5.28□□□□□ -1.56
LAMB1-204ENST00000393561 KRTAP3-3Q9BYR6 98 aa5.27□□□□□ -1.57
LAMB1-204ENST00000393561 FBN1P35555 2871 aaKnown RBP5.24□□□□□ -1.57
LAMB1-204ENST00000393561 FBN3Q75N90 2809 aa5.23□□□□□ -1.57
LAMB1-204ENST00000393561 AKAP9Q99996 3911 aa5.22□□□□□ -1.57
LAMB1-204ENST00000393561 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
LAMB1-204ENST00000393561 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
LAMB1-204ENST00000393561 MEGF8Q7Z7M0 2845 aa5.19□□□□□ -1.58
LAMB1-204ENST00000393561 INE1O15225 51 aa5.18□□□□□ -1.58
LAMB1-204ENST00000393561 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.58
LAMB1-204ENST00000393561 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
LAMB1-204ENST00000393561 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
LAMB1-204ENST00000393561 KRTAP12-3P60328 96 aa5.07□□□□□ -1.6
LAMB1-204ENST00000393561 COL7A1Q02388 2944 aa5.05□□□□□ -1.6
LAMB1-204ENST00000393561 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
LAMB1-204ENST00000393561 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
LAMB1-204ENST00000393561 TRRAPQ9Y4A5 3859 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms