RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 UQCR11O14957 56 aa4.26□□□□□ -1.73
NPHP1-203ENST00000393272 FASNP49327 2511 aaKnown RBP4.25□□□□□ -1.73
NPHP1-203ENST00000393272 KRTAP10-11P60412 298 aa4.25□□□□□ -1.73
NPHP1-203ENST00000393272 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
NPHP1-203ENST00000393272 KRTAP1-5Q9BYS1 174 aa4.24□□□□□ -1.73
NPHP1-203ENST00000393272 NOTCH1P46531 2555 aa4.24□□□□□ -1.73
NPHP1-203ENST00000393272 COL6A5A8TX70 2615 aa4.24□□□□□ -1.73
NPHP1-203ENST00000393272 DNAH9Q9NYC9 4486 aa4.23□□□□□ -1.73
NPHP1-203ENST00000393272 ZNF861PO60384 105 aa4.21□□□□□ -1.73
NPHP1-203ENST00000393272 SPINK6Q6UWN8 80 aa4.21□□□□□ -1.73
NPHP1-203ENST00000393272 PANO1I0J062 215 aa4.21□□□□□ -1.74
NPHP1-203ENST00000393272 FRAS1Q86XX4 4008 aa4.21□□□□□ -1.74
NPHP1-203ENST00000393272 WWC2-AS2Q96NR7 200 aa4.2□□□□□ -1.74
NPHP1-203ENST00000393272 LINC00483Q53H64 154 aa4.19□□□□□ -1.74
NPHP1-203ENST00000393272 C1orf134Q5TEV5 83 aa4.19□□□□□ -1.74
NPHP1-203ENST00000393272 ANAPC11Q9NYG5 84 aa4.19□□□□□ -1.74
NPHP1-203ENST00000393272 INAFM1C9JVW0 142 aa4.19□□□□□ -1.74
NPHP1-203ENST00000393272 MEGF8Q7Z7M0 2845 aa4.17□□□□□ -1.74
NPHP1-203ENST00000393272 CMYA5Q8N3K9 4069 aa4.17□□□□□ -1.74
NPHP1-203ENST00000393272 KMT2BQ9UMN6 2715 aaPredicted RBP4.16□□□□□ -1.74
NPHP1-203ENST00000393272 ZNF706Q9Y5V0 76 aaPredicted RBP4.15□□□□□ -1.74
NPHP1-203ENST00000393272 STAB1Q9NY15 2570 aa4.15□□□□□ -1.75
NPHP1-203ENST00000393272 IGLV7-43P04211 117 aa4.15□□□□□ -1.75
NPHP1-203ENST00000393272 IGKV2-30P06310 120 aa4.15□□□□□ -1.75
NPHP1-203ENST00000393272 ROMO1P60602 79 aa4.14□□□□□ -1.75
NPHP1-203ENST00000393272 C14orf177Q52M58 125 aa4.14□□□□□ -1.75
NPHP1-203ENST00000393272 DNAH7Q8WXX0 4024 aa4.14□□□□□ -1.75
NPHP1-203ENST00000393272 DNAH3Q8TD57 4116 aa4.14□□□□□ -1.75
NPHP1-203ENST00000393272 FAM229AH3BQW9 127 aa4.14□□□□□ -1.75
NPHP1-203ENST00000393272 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.13□□□□□ -1.75
NPHP1-203ENST00000393272 STAB2Q8WWQ8 2551 aa4.13□□□□□ -1.75
NPHP1-203ENST00000393272 KRTAP25-1Q3LHN0 102 aa4.13□□□□□ -1.75
NPHP1-203ENST00000393272 DNAH8Q96JB1 4490 aa4.12□□□□□ -1.75
NPHP1-203ENST00000393272 HUWE1Q7Z6Z7 4374 aaKnown RBP4.12□□□□□ -1.75
NPHP1-203ENST00000393272 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
NPHP1-203ENST00000393272 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
NPHP1-203ENST00000393272 A8MUU9 505 aa4.11□□□□□ -1.75
NPHP1-203ENST00000393272 SPACA4Q8TDM5 124 aa4.11□□□□□ -1.75
NPHP1-203ENST00000393272 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
NPHP1-203ENST00000393272 PSORS1C2Q9UIG4 136 aa4.1□□□□□ -1.75
NPHP1-203ENST00000393272 IGKV2D-30A0A075B6S6 120 aa4.1□□□□□ -1.75
NPHP1-203ENST00000393272 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
NPHP1-203ENST00000393272 SPINK1P00995 79 aa4.09□□□□□ -1.75
NPHP1-203ENST00000393272 LCE2BO14633 110 aa4.09□□□□□ -1.75
NPHP1-203ENST00000393272 UBE2DNLQ8IWF7 75 aa4.09□□□□□ -1.75
NPHP1-203ENST00000393272 TGP01266 2768 aa4.09□□□□□ -1.75
NPHP1-203ENST00000393272 H0YAA0 97 aa4.08□□□□□ -1.76
NPHP1-203ENST00000393272 LINC00304Q8N9R0 145 aa4.08□□□□□ -1.76
NPHP1-203ENST00000393272 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
NPHP1-203ENST00000393272 Q6ZSA8 131 aa4.07□□□□□ -1.76
NPHP1-203ENST00000393272 HECTD4Q9Y4D8 3996 aa4.07□□□□□ -1.76
NPHP1-203ENST00000393272 LY6G6CO95867 125 aa4.06□□□□□ -1.76
NPHP1-203ENST00000393272 P0C880 135 aa4.05□□□□□ -1.76
NPHP1-203ENST00000393272 KRTAP16-1A8MUX0 517 aa4.05□□□□□ -1.76
NPHP1-203ENST00000393272 CRIPTQ9P021 101 aa4.04□□□□□ -1.76
NPHP1-203ENST00000393272 DNAH17Q9UFH2 4485 aa4.04□□□□□ -1.76
NPHP1-203ENST00000393272 Q6ZRN7 208 aaPredicted RBP4.03□□□□□ -1.76
NPHP1-203ENST00000393272 Q8N1X5 172 aa4.03□□□□□ -1.76
NPHP1-203ENST00000393272 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
NPHP1-203ENST00000393272 APLNQ9ULZ1 77 aa4.02□□□□□ -1.77
NPHP1-203ENST00000393272 NBDYA0A0U1RRE5 68 aa4.01□□□□□ -1.77
NPHP1-203ENST00000393272 PLECQ15149 4684 aaKnown RBP4□□□□□ -1.77
NPHP1-203ENST00000393272 SSBP3-AS1Q7Z2R9 100 aa3.99□□□□□ -1.77
NPHP1-203ENST00000393272 VPS13DQ5THJ4 4388 aa3.99□□□□□ -1.77
NPHP1-203ENST00000393272 A0A1B0GU33 70 aa3.98□□□□□ -1.77
NPHP1-203ENST00000393272 FBN3Q75N90 2809 aa3.98□□□□□ -1.77
NPHP1-203ENST00000393272 KMT2AQ03164 3969 aa3.98□□□□□ -1.77
NPHP1-203ENST00000393272 MGAM2Q2M2H8 2515 aa3.97□□□□□ -1.77
NPHP1-203ENST00000393272 DYNC2H1Q8NCM8 4307 aaKnown RBP3.97□□□□□ -1.77
NPHP1-203ENST00000393272 KRTAP24-1Q3LI83 254 aa3.97□□□□□ -1.77
NPHP1-203ENST00000393272 A0A087WTM6 91 aa3.97□□□□□ -1.77
NPHP1-203ENST00000393272 H1FX-AS1Q4G0G2 97 aa3.96□□□□□ -1.78
NPHP1-203ENST00000393272 KRTAP13-2Q52LG2 175 aa3.95□□□□□ -1.78
NPHP1-203ENST00000393272 J3QKU1 62 aa3.94□□□□□ -1.78
NPHP1-203ENST00000393272 LCE2CQ5TA81 110 aa3.93□□□□□ -1.78
NPHP1-203ENST00000393272 DNAH6Q9C0G6 4158 aa3.91□□□□□ -1.78
NPHP1-203ENST00000393272 K7ERS5 55 aa3.91□□□□□ -1.78
NPHP1-203ENST00000393272 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
NPHP1-203ENST00000393272 STARD9Q9P2P6 4700 aa3.9□□□□□ -1.78
NPHP1-203ENST00000393272 DNAH2Q9P225 4427 aa3.9□□□□□ -1.78
NPHP1-203ENST00000393272 DNAH11Q96DT5 4516 aa3.9□□□□□ -1.79
NPHP1-203ENST00000393272 NDUFAF8A1L188 74 aa3.89□□□□□ -1.79
NPHP1-203ENST00000393272 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
NPHP1-203ENST00000393272 COX6B2Q6YFQ2 88 aa3.88□□□□□ -1.79
NPHP1-203ENST00000393272 TPRXLQ17RH7 258 aa3.88□□□□□ -1.79
NPHP1-203ENST00000393272 PRKDCP78527 4128 aaKnown RBP3.87□□□□□ -1.79
NPHP1-203ENST00000393272 NUPR2A6NF83 97 aa3.86□□□□□ -1.79
NPHP1-203ENST00000393272 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
NPHP1-203ENST00000393272 KRTAP15-1Q3LI76 137 aa3.84□□□□□ -1.8
NPHP1-203ENST00000393272 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.8
NPHP1-203ENST00000393272 DMBT1Q9UGM3 2413 aaPredicted RBP3.84□□□□□ -1.8
NPHP1-203ENST00000393272 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
NPHP1-203ENST00000393272 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
NPHP1-203ENST00000393272 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
NPHP1-203ENST00000393272 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
NPHP1-203ENST00000393272 VPS13BQ7Z7G8 4022 aa3.81□□□□□ -1.8
NPHP1-203ENST00000393272 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
NPHP1-203ENST00000393272 A0A0D9SG42 100 aa3.8□□□□□ -1.8
NPHP1-203ENST00000393272 KRTAP13-4Q3LI77 160 aa3.8□□□□□ -1.8
NPHP1-203ENST00000393272 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms