RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 NISCHQ9Y2I1 1504 aa13.16□□□□□ -0.3
NPHP1-203ENST00000393272 HRCP23327 699 aa12.26□□□□□ -0.45
NPHP1-203ENST00000393272 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
NPHP1-203ENST00000393272 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.48
NPHP1-203ENST00000393272 PCGF6Q9BYE7 350 aa11.93□□□□□ -0.5
NPHP1-203ENST00000393272 MYO15BQ96JP2 1530 aa11.85□□□□□ -0.51
NPHP1-203ENST00000393272 SHROOM4Q9ULL8 1493 aa11.79□□□□□ -0.52
NPHP1-203ENST00000393272 SUPT5HO00267 1087 aaKnown RBP11.79□□□□□ -0.52
NPHP1-203ENST00000393272 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.53
NPHP1-203ENST00000393272 CHIC1Q5VXU3 224 aa11.66□□□□□ -0.54
NPHP1-203ENST00000393272 DCAF1Q9Y4B6 1507 aa11.6□□□□□ -0.55
NPHP1-203ENST00000393272 MYT1Q01538 1121 aa11.59□□□□□ -0.55
NPHP1-203ENST00000393272 CCDC180Q9P1Z9 1646 aa11.52□□□□□ -0.57
NPHP1-203ENST00000393272 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
NPHP1-203ENST00000393272 ZEB1P37275 1124 aaPredicted RBP11.42□□□□□ -0.58
NPHP1-203ENST00000393272 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
NPHP1-203ENST00000393272 ACIN1Q9UKV3 1341 aaKnown RBP11.34□□□□□ -0.59
NPHP1-203ENST00000393272 NEUROD1Q13562 356 aa11.33□□□□□ -0.6
NPHP1-203ENST00000393272 GTF3C3Q9Y5Q9 886 aa11.27□□□□□ -0.61
NPHP1-203ENST00000393272 ZCCHC6Q5VYS8 1495 aaKnown RBP11.24□□□□□ -0.61
NPHP1-203ENST00000393272 CENPBP07199 599 aaPredicted RBP11.16□□□□□ -0.62
NPHP1-203ENST00000393272 DIEXFQ68CQ4 756 aaKnown RBP11.06□□□□□ -0.64
NPHP1-203ENST00000393272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11□□□□□ -0.65
NPHP1-203ENST00000393272 CCER1Q8TC90 406 aaPredicted RBP10.97□□□□□ -0.65
NPHP1-203ENST00000393272 AEBP2Q6ZN18 517 aaPredicted RBP10.94□□□□□ -0.66
NPHP1-203ENST00000393272 TTBK1Q5TCY1 1321 aaPredicted RBP10.92□□□□□ -0.66
NPHP1-203ENST00000393272 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
NPHP1-203ENST00000393272 FAM9AQ8IZU1 332 aaPredicted RBP10.9□□□□□ -0.66
NPHP1-203ENST00000393272 BCL11AQ9H165 835 aa10.89□□□□□ -0.67
NPHP1-203ENST00000393272 DCAF8L2P0C7V8 631 aa10.89□□□□□ -0.67
NPHP1-203ENST00000393272 TRIM41Q8WV44 630 aa10.89□□□□□ -0.67
NPHP1-203ENST00000393272 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
NPHP1-203ENST00000393272 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
NPHP1-203ENST00000393272 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
NPHP1-203ENST00000393272 MIER1Q8N108 512 aa10.77□□□□□ -0.69
NPHP1-203ENST00000393272 ABCC9O60706 1549 aa10.74□□□□□ -0.69
NPHP1-203ENST00000393272 RB1CC1Q8TDY2 1594 aa10.7□□□□□ -0.7
NPHP1-203ENST00000393272 TSHZ2Q9NRE2 1034 aa10.69□□□□□ -0.7
NPHP1-203ENST00000393272 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
NPHP1-203ENST00000393272 CSRNP3Q8WYN3 585 aa10.69□□□□□ -0.7
NPHP1-203ENST00000393272 RSF1Q96T23 1441 aaPredicted RBP10.65□□□□□ -0.7
NPHP1-203ENST00000393272 CLSPNQ9HAW4 1339 aa10.63□□□□□ -0.71
NPHP1-203ENST00000393272 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
NPHP1-203ENST00000393272 PRKCSHP14314 528 aaPredicted RBP10.56□□□□□ -0.72
NPHP1-203ENST00000393272 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
NPHP1-203ENST00000393272 BCANQ96GW7 911 aa10.44□□□□□ -0.74
NPHP1-203ENST00000393272 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
NPHP1-203ENST00000393272 SCRIBQ14160 1630 aa10.43□□□□□ -0.74
NPHP1-203ENST00000393272 RBM19Q9Y4C8 960 aaKnown RBP10.42□□□□□ -0.74
NPHP1-203ENST00000393272 EIF4G1Q04637 1599 aaKnown RBP10.37□□□□□ -0.75
NPHP1-203ENST00000393272 TNIKQ9UKE5 1360 aa10.37□□□□□ -0.75
NPHP1-203ENST00000393272 FKBP8Q14318 412 aa10.36□□□□□ -0.75
NPHP1-203ENST00000393272 MSH5O43196 834 aa10.36□□□□□ -0.75
NPHP1-203ENST00000393272 KCNH8Q96L42 1107 aa10.34□□□□□ -0.75
NPHP1-203ENST00000393272 ABCC8Q09428 1581 aa10.34□□□□□ -0.75
NPHP1-203ENST00000393272 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
NPHP1-203ENST00000393272 WIZO95785 1651 aa10.31□□□□□ -0.76
NPHP1-203ENST00000393272 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
NPHP1-203ENST00000393272 CECR2Q9BXF3 1484 aa10.31□□□□□ -0.76
NPHP1-203ENST00000393272 SOGA1O94964 1423 aa10.29□□□□□ -0.76
NPHP1-203ENST00000393272 UBTFP17480 764 aaKnown RBP10.29□□□□□ -0.76
NPHP1-203ENST00000393272 ITGAEP38570 1179 aa10.29□□□□□ -0.76
NPHP1-203ENST00000393272 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.76
NPHP1-203ENST00000393272 DHX57Q6P158 1386 aaKnown RBP10.26□□□□□ -0.77
NPHP1-203ENST00000393272 NEFLP07196 543 aa10.25□□□□□ -0.77
NPHP1-203ENST00000393272 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
NPHP1-203ENST00000393272 BAZ1AQ9NRL2 1556 aaPredicted RBP10.23□□□□□ -0.77
NPHP1-203ENST00000393272 GOLGA3Q08378 1498 aa10.23□□□□□ -0.77
NPHP1-203ENST00000393272 FANCIQ9NVI1 1328 aa10.23□□□□□ -0.77
NPHP1-203ENST00000393272 EEA1Q15075 1411 aa10.21□□□□□ -0.78
NPHP1-203ENST00000393272 DEKP35659 375 aaKnown RBP10.2□□□□□ -0.78
NPHP1-203ENST00000393272 ANO8Q9HCE9 1232 aaPredicted RBP10.2□□□□□ -0.78
NPHP1-203ENST00000393272 NACADO15069 1562 aa10.19□□□□□ -0.78
NPHP1-203ENST00000393272 CLIP1P30622 1438 aa10.17□□□□□ -0.78
NPHP1-203ENST00000393272 VPS8Q8N3P4 1428 aa10.17□□□□□ -0.78
NPHP1-203ENST00000393272 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
NPHP1-203ENST00000393272 APLP2Q06481 763 aa10.17□□□□□ -0.78
NPHP1-203ENST00000393272 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
NPHP1-203ENST00000393272 CDK11AQ9UQ88 783 aaPredicted RBP10.12□□□□□ -0.79
NPHP1-203ENST00000393272 DDX10Q13206 875 aaKnown RBP10.11□□□□□ -0.79
NPHP1-203ENST00000393272 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
NPHP1-203ENST00000393272 SALL2Q9Y467 1007 aaPredicted RBP10.1□□□□□ -0.79
NPHP1-203ENST00000393272 KIF21BO75037 1637 aa10.09□□□□□ -0.79
NPHP1-203ENST00000393272 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
NPHP1-203ENST00000393272 TOP2AP11388 1531 aaKnown RBP10.07□□□□□ -0.8
NPHP1-203ENST00000393272 IRX6P78412 446 aaPredicted RBP10.07□□□□□ -0.8
NPHP1-203ENST00000393272 NBR1Q14596 966 aa10.06□□□□□ -0.8
NPHP1-203ENST00000393272 PPP1R15AO75807 674 aaPredicted RBP10.05□□□□□ -0.8
NPHP1-203ENST00000393272 CCER2I3L3R5 266 aa10.04□□□□□ -0.8
NPHP1-203ENST00000393272 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
NPHP1-203ENST00000393272 ERICH6BQ5W0A0 696 aa10.04□□□□□ -0.8
NPHP1-203ENST00000393272 CCDC136Q96JN2 1154 aa10.04□□□□□ -0.8
NPHP1-203ENST00000393272 CUX2O14529 1486 aa10.04□□□□□ -0.8
NPHP1-203ENST00000393272 WDR97A6NE52 1622 aa10.04□□□□□ -0.8
NPHP1-203ENST00000393272 MAPKBP1O60336 1514 aa10.03□□□□□ -0.8
NPHP1-203ENST00000393272 BAZ1BQ9UIG0 1483 aaKnown RBP10.02□□□□□ -0.81
NPHP1-203ENST00000393272 RAPGEF2Q9Y4G8 1499 aa10.01□□□□□ -0.81
NPHP1-203ENST00000393272 NOP58Q9Y2X3 529 aaKnown RBP10.01□□□□□ -0.81
NPHP1-203ENST00000393272 RRBP1Q9P2E9 1410 aaKnown RBP10.01□□□□□ -0.81
NPHP1-203ENST00000393272 ANP32CO43423 234 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms