RNA–Protein interactions for RNA: ENST00000391310.1

RNU6-1239P-201, Transcript of RNA, U6 small nuclear 1239, pseudogene, humanhuman

BASIC

Gene RNU6-1239P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1239P-201ENST00000391310 RPS27LQ71UM5 84 aaKnown RBP-4□□□□□ -3.05
RNU6-1239P-201ENST00000391310 UQCRHP07919 91 aa-4.01□□□□□ -3.05
RNU6-1239P-201ENST00000391310 HMGA1P17096 107 aaKnown RBP-4.01□□□□□ -3.05
RNU6-1239P-201ENST00000391310 CD163L1Q9NR16 1453 aa-4.01□□□□□ -3.05
RNU6-1239P-201ENST00000391310 MPC2O95563 127 aa-4.02□□□□□ -3.05
RNU6-1239P-201ENST00000391310 ARHGAP5Q13017 1502 aa-4.02□□□□□ -3.05
RNU6-1239P-201ENST00000391310 H3BQ15 152 aa-4.03□□□□□ -3.05
RNU6-1239P-201ENST00000391310 RAPGEF2Q9Y4G8 1499 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 CLASP1Q7Z460 1538 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 IQCF6A8MYZ5 107 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 SELENOWP63302 87 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 LINC00470Q9BZP3 86 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 RGPD1P0DJD0 1748 aa-4.04□□□□□ -3.06
RNU6-1239P-201ENST00000391310 BAZ1AQ9NRL2 1556 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 hADV29S1A0JD25 119 aa-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 DEFB104AQ8WTQ1 72 aa-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 PAIP2BQ9ULR5 123 aaKnown RBP-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 CHD1O14646 1710 aa-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 NRXN1Q9ULB1 1477 aa-4.05□□□□□ -3.06
RNU6-1239P-201ENST00000391310 ETDBQ3ZM63 59 aa-4.07□□□□□ -3.06
RNU6-1239P-201ENST00000391310 A0A1B0GUT8 65 aa-4.08□□□□□ -3.06
RNU6-1239P-201ENST00000391310 GNG7O60262 68 aa-4.08□□□□□ -3.06
RNU6-1239P-201ENST00000391310 FOCADQ5VW36 1801 aa-4.08□□□□□ -3.06
RNU6-1239P-201ENST00000391310 AKAIN1P0CW23 69 aa-4.09□□□□□ -3.06
RNU6-1239P-201ENST00000391310 ABCA3Q99758 1704 aa-4.09□□□□□ -3.06
RNU6-1239P-201ENST00000391310 TRAV21A0A0B4J279 112 aa-4.1□□□□□ -3.07
RNU6-1239P-201ENST00000391310 SFTA3P0C7M3 94 aa-4.1□□□□□ -3.07
RNU6-1239P-201ENST00000391310 PREX2Q70Z35 1606 aa-4.1□□□□□ -3.07
RNU6-1239P-201ENST00000391310 PPLO60437 1756 aa-4.11□□□□□ -3.07
RNU6-1239P-201ENST00000391310 CC2D2AQ9P2K1 1620 aa-4.11□□□□□ -3.07
RNU6-1239P-201ENST00000391310 KIAA0586Q9BVV6 1533 aa-4.11□□□□□ -3.07
RNU6-1239P-201ENST00000391310 TJP1Q07157 1748 aa-4.12□□□□□ -3.07
RNU6-1239P-201ENST00000391310 CD52P31358 61 aa-4.13□□□□□ -3.07
RNU6-1239P-201ENST00000391310 ZNF720Q7Z2F6 126 aa-4.13□□□□□ -3.07
RNU6-1239P-201ENST00000391310 SVBPQ8N300 66 aa-4.13□□□□□ -3.07
RNU6-1239P-201ENST00000391310 NEXMIFQ5QGS0 1516 aa-4.13□□□□□ -3.07
RNU6-1239P-201ENST00000391310 MYH4Q9Y623 1939 aa-4.14□□□□□ -3.07
RNU6-1239P-201ENST00000391310 NCBP2-AS2Q69YL0 99 aa-4.14□□□□□ -3.07
RNU6-1239P-201ENST00000391310 PYDC1Q8WXC3 89 aa-4.14□□□□□ -3.07
RNU6-1239P-201ENST00000391310 ANKRD26Q9UPS8 1709 aa-4.15□□□□□ -3.07
RNU6-1239P-201ENST00000391310 DEFB133Q30KQ1 61 aa-4.15□□□□□ -3.07
RNU6-1239P-201ENST00000391310 KIF14Q15058 1648 aa-4.15□□□□□ -3.07
RNU6-1239P-201ENST00000391310 CCDC58Q4VC31 144 aa-4.16□□□□□ -3.08
RNU6-1239P-201ENST00000391310 MINOS1Q5TGZ0 78 aa-4.16□□□□□ -3.08
RNU6-1239P-201ENST00000391310 IER3IP1Q9Y5U9 82 aa-4.16□□□□□ -3.08
RNU6-1239P-201ENST00000391310 UACAQ9BZF9 1416 aa-4.17□□□□□ -3.08
RNU6-1239P-201ENST00000391310 MAP3K4Q9Y6R4 1608 aa-4.17□□□□□ -3.08
RNU6-1239P-201ENST00000391310 MYOM2P54296 1465 aa-4.18□□□□□ -3.08
RNU6-1239P-201ENST00000391310 CYB5AP00167 134 aa-4.18□□□□□ -3.08
RNU6-1239P-201ENST00000391310 PLGLAQ15195 96 aa-4.18□□□□□ -3.08
RNU6-1239P-201ENST00000391310 ITSN1Q15811 1721 aa-4.18□□□□□ -3.08
RNU6-1239P-201ENST00000391310 FCER1GP30273 86 aa-4.19□□□□□ -3.08
RNU6-1239P-201ENST00000391310 DDX60LQ5H9U9 1706 aaKnown RBP-4.19□□□□□ -3.08
RNU6-1239P-201ENST00000391310 POLR2KP53803 58 aaKnown RBP-4.2□□□□□ -3.08
RNU6-1239P-201ENST00000391310 LTN1O94822 1766 aa-4.21□□□□□ -3.08
RNU6-1239P-201ENST00000391310 SNAPC5O75971 98 aa-4.21□□□□□ -3.08
RNU6-1239P-201ENST00000391310 C6orf48Q9UBA6 75 aa-4.21□□□□□ -3.08
RNU6-1239P-201ENST00000391310 FAM208AQ9UK61 1670 aaKnown RBP-4.22□□□□□ -3.08
RNU6-1239P-201ENST00000391310 CCNB3Q8WWL7 1395 aa-4.22□□□□□ -3.08
RNU6-1239P-201ENST00000391310 NRKQ7Z2Y5 1582 aa-4.23□□□□□ -3.09
RNU6-1239P-201ENST00000391310 RICTORQ6R327 1708 aa-4.23□□□□□ -3.09
RNU6-1239P-201ENST00000391310 DIP2BQ9P265 1576 aa-4.23□□□□□ -3.09
RNU6-1239P-201ENST00000391310 LMO7Q8WWI1 1683 aa-4.24□□□□□ -3.09
RNU6-1239P-201ENST00000391310 GNGT2O14610 69 aa-4.24□□□□□ -3.09
RNU6-1239P-201ENST00000391310 DEFB131BA0A096LNP1 70 aa-4.25□□□□□ -3.09
RNU6-1239P-201ENST00000391310 FAM107BQ9H098 131 aa-4.25□□□□□ -3.09
RNU6-1239P-201ENST00000391310 NDUFB1O75438 58 aa-4.26□□□□□ -3.09
RNU6-1239P-201ENST00000391310 S100A8P05109 93 aa-4.26□□□□□ -3.09
RNU6-1239P-201ENST00000391310 ACBD7Q8N6N7 88 aa-4.26□□□□□ -3.09
RNU6-1239P-201ENST00000391310 NHSQ6T4R5 1651 aa-4.26□□□□□ -3.09
RNU6-1239P-201ENST00000391310 C20orf78Q9BR46 151 aa-4.27□□□□□ -3.09
RNU6-1239P-201ENST00000391310 RPL13AP3Q6NVV1 102 aa-4.28□□□□□ -3.09
RNU6-1239P-201ENST00000391310 VPS8Q8N3P4 1428 aa-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 UQCRHLA0A096LP55 91 aa-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 ATOX1O00244 68 aa-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 IFI27P40305 119 aaPredicted RBP-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 KAAG1Q9UBP8 84 aa-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 ROCK2O75116 1388 aaKnown RBP-4.29□□□□□ -3.1
RNU6-1239P-201ENST00000391310 NDUFA4O00483 81 aa-4.3□□□□□ -3.1
RNU6-1239P-201ENST00000391310 HMGN2P05204 90 aaKnown RBP-4.3□□□□□ -3.1
RNU6-1239P-201ENST00000391310 NRAPQ86VF7 1730 aa-4.31□□□□□ -3.1
RNU6-1239P-201ENST00000391310 CRIP1P50238 77 aa-4.31□□□□□ -3.1
RNU6-1239P-201ENST00000391310 PPP3R1P63098 170 aa-4.31□□□□□ -3.1
RNU6-1239P-201ENST00000391310 PMCHL2Q9BQD1 86 aa-4.31□□□□□ -3.1
RNU6-1239P-201ENST00000391310 GNG4P50150 75 aa-4.32□□□□□ -3.1
RNU6-1239P-201ENST00000391310 CCDC88BA6NC98 1476 aa-4.32□□□□□ -3.1
RNU6-1239P-201ENST00000391310 ARHGAP35Q9NRY4 1499 aa-4.32□□□□□ -3.1
RNU6-1239P-201ENST00000391310 MRPL33O75394 65 aaKnown RBP-4.33□□□□□ -3.1
RNU6-1239P-201ENST00000391310 ABRACLQ9P1F3 81 aa-4.33□□□□□ -3.1
RNU6-1239P-201ENST00000391310 PZPP20742 1482 aa-4.33□□□□□ -3.1
RNU6-1239P-201ENST00000391310 EPRSP07814 1512 aaKnown RBP-4.33□□□□□ -3.1
RNU6-1239P-201ENST00000391310 HTN1P15515 57 aa-4.34□□□□□ -3.1
RNU6-1239P-201ENST00000391310 CLTCQ00610 1675 aaKnown RBP-4.35□□□□□ -3.11
RNU6-1239P-201ENST00000391310 CCDC180Q9P1Z9 1646 aa-4.35□□□□□ -3.11
RNU6-1239P-201ENST00000391310 C3P01024 1663 aa-4.37□□□□□ -3.11
RNU6-1239P-201ENST00000391310 COL5A1-AS1Q5SY13 56 aa-4.37□□□□□ -3.11
RNU6-1239P-201ENST00000391310 SCRIBQ14160 1630 aa-4.37□□□□□ -3.11
RNU6-1239P-201ENST00000391310 FANCAO15360 1455 aa-4.38□□□□□ -3.11
RNU6-1239P-201ENST00000391310 ARFGEF2Q9Y6D5 1785 aa-4.39□□□□□ -3.11
RNU6-1239P-201ENST00000391310 UMAD1C9J7I0 102 aa-4.39□□□□□ -3.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms