RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 NOTCH2NLQ7Z3S9 236 aa8.62□□□□□ -1.03
PSME4-201ENST00000389993 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
PSME4-201ENST00000389993 ZCCHC13Q8WW36 166 aaKnown RBP8.6□□□□□ -1.03
PSME4-201ENST00000389993 M0R2T5 61 aa8.6□□□□□ -1.03
PSME4-201ENST00000389993 SPANXA2-OT1Q8N9U9 137 aa8.6□□□□□ -1.03
PSME4-201ENST00000389993 VPS13CQ709C8 3753 aa8.58□□□□□ -1.04
PSME4-201ENST00000389993 SPRR1BP22528 89 aa8.57□□□□□ -1.04
PSME4-201ENST00000389993 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
PSME4-201ENST00000389993 SPINK7P58062 85 aa8.55□□□□□ -1.04
PSME4-201ENST00000389993 LINC00483Q53H64 154 aa8.5□□□□□ -1.05
PSME4-201ENST00000389993 OXTP01178 125 aa8.48□□□□□ -1.05
PSME4-201ENST00000389993 FP248Q71RG6 208 aaPredicted RBP8.48□□□□□ -1.05
PSME4-201ENST00000389993 S4R3F8 94 aa8.47□□□□□ -1.05
PSME4-201ENST00000389993 CRIPTQ9P021 101 aa8.46□□□□□ -1.06
PSME4-201ENST00000389993 Q5XG85 94 aa8.45□□□□□ -1.06
PSME4-201ENST00000389993 A0A1B0GU33 70 aa8.44□□□□□ -1.06
PSME4-201ENST00000389993 Q1T7F1 81 aa8.43□□□□□ -1.06
PSME4-201ENST00000389993 CDC42SE1Q9NRR8 79 aa8.42□□□□□ -1.06
PSME4-201ENST00000389993 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
PSME4-201ENST00000389993 FBN1P35555 2871 aaKnown RBP8.37□□□□□ -1.07
PSME4-201ENST00000389993 DMBT1Q9UGM3 2413 aaPredicted RBP8.37□□□□□ -1.07
PSME4-201ENST00000389993 PDZD2O15018 2839 aa8.37□□□□□ -1.07
PSME4-201ENST00000389993 PRAC1Q96KF2 57 aa8.35□□□□□ -1.07
PSME4-201ENST00000389993 Q5VV11 94 aa8.34□□□□□ -1.07
PSME4-201ENST00000389993 CAMK2N1Q7Z7J9 78 aa8.34□□□□□ -1.07
PSME4-201ENST00000389993 PKD1L1Q8TDX9 2849 aa8.34□□□□□ -1.07
PSME4-201ENST00000389993 TRRAPQ9Y4A5 3859 aa8.34□□□□□ -1.08
PSME4-201ENST00000389993 KRTAP29-1A8MX34 341 aaPredicted RBP8.33□□□□□ -1.08
PSME4-201ENST00000389993 KTN1-AS1Q86SY8 53 aa8.33□□□□□ -1.08
PSME4-201ENST00000389993 FLG2Q5D862 2391 aaPredicted RBP8.32□□□□□ -1.08
PSME4-201ENST00000389993 TENM1Q9UKZ4 2725 aa8.32□□□□□ -1.08
PSME4-201ENST00000389993 CSAG1Q6PB30 78 aa8.31□□□□□ -1.08
PSME4-201ENST00000389993 Q75L30 129 aa8.3□□□□□ -1.08
PSME4-201ENST00000389993 SPATA8Q6RVD6 105 aa8.3□□□□□ -1.08
PSME4-201ENST00000389993 ANK3Q12955 4377 aaKnown RBP8.3□□□□□ -1.08
PSME4-201ENST00000389993 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
PSME4-201ENST00000389993 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
PSME4-201ENST00000389993 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
PSME4-201ENST00000389993 KRTAP13-1Q8IUC0 172 aa8.26□□□□□ -1.09
PSME4-201ENST00000389993 VWFP04275 2813 aa8.25□□□□□ -1.09
PSME4-201ENST00000389993 OTOGQ6ZRI0 2925 aa8.24□□□□□ -1.09
PSME4-201ENST00000389993 SEC61BP60468 96 aaKnown RBP8.23□□□□□ -1.09
PSME4-201ENST00000389993 R4GN34 69 aa8.23□□□□□ -1.09
PSME4-201ENST00000389993 ADM2Q7Z4H4 148 aa8.21□□□□□ -1.1
PSME4-201ENST00000389993 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
PSME4-201ENST00000389993 LCA10Q71F78 164 aa8.18□□□□□ -1.1
PSME4-201ENST00000389993 M0QZ58 72 aa8.17□□□□□ -1.1
PSME4-201ENST00000389993 ZNF469Q96JG9 3925 aaPredicted RBP8.15□□□□□ -1.1
PSME4-201ENST00000389993 A8MU10 97 aa8.1□□□□□ -1.11
PSME4-201ENST00000389993 H1FX-AS1Q4G0G2 97 aa8.09□□□□□ -1.11
PSME4-201ENST00000389993 TGP01266 2768 aa8□□□□□ -1.13
PSME4-201ENST00000389993 ASB16-AS1Q495Z4 193 aa8□□□□□ -1.13
PSME4-201ENST00000389993 KRTAP1-4P0C5Y4 121 aa7.99□□□□□ -1.13
PSME4-201ENST00000389993 RPL37P61927 97 aaKnown RBP7.99□□□□□ -1.13
PSME4-201ENST00000389993 CSMD3Q7Z407 3707 aa7.98□□□□□ -1.13
PSME4-201ENST00000389993 KRTAP21-3Q3LHN1 58 aa7.95□□□□□ -1.14
PSME4-201ENST00000389993 AKAP9Q99996 3911 aa7.93□□□□□ -1.14
PSME4-201ENST00000389993 A0A1B0GVY2 172 aa7.9□□□□□ -1.15
PSME4-201ENST00000389993 A8MUU9 505 aa7.9□□□□□ -1.15
PSME4-201ENST00000389993 ROMO1P60602 79 aa7.89□□□□□ -1.15
PSME4-201ENST00000389993 RPS29P62273 56 aaKnown RBP7.89□□□□□ -1.15
PSME4-201ENST00000389993 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
PSME4-201ENST00000389993 LUZP6Q538Z0 58 aa7.84□□□□□ -1.15
PSME4-201ENST00000389993 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
PSME4-201ENST00000389993 XP32Q5T750 250 aa7.81□□□□□ -1.16
PSME4-201ENST00000389993 HUWE1Q7Z6Z7 4374 aaKnown RBP7.75□□□□□ -1.17
PSME4-201ENST00000389993 FBN3Q75N90 2809 aa7.69□□□□□ -1.18
PSME4-201ENST00000389993 SRRM2Q9UQ35 2752 aaKnown RBP7.69□□□□□ -1.18
PSME4-201ENST00000389993 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
PSME4-201ENST00000389993 A6NN06 94 aa7.64□□□□□ -1.19
PSME4-201ENST00000389993 COL7A1Q02388 2944 aa7.63□□□□□ -1.19
PSME4-201ENST00000389993 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
PSME4-201ENST00000389993 H3BS24 57 aa7.54□□□□□ -1.2
PSME4-201ENST00000389993 KRTAP13-3Q3SY46 172 aa7.54□□□□□ -1.2
PSME4-201ENST00000389993 KRTAP25-1Q3LHN0 102 aa7.53□□□□□ -1.2
PSME4-201ENST00000389993 MEGF8Q7Z7M0 2845 aa7.5□□□□□ -1.21
PSME4-201ENST00000389993 H0YAA0 97 aa7.5□□□□□ -1.21
PSME4-201ENST00000389993 P0C880 135 aa7.49□□□□□ -1.21
PSME4-201ENST00000389993 TPRXLQ17RH7 258 aa7.47□□□□□ -1.21
PSME4-201ENST00000389993 KRTAP10-8P60410 259 aa7.46□□□□□ -1.22
PSME4-201ENST00000389993 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
PSME4-201ENST00000389993 DNAH9Q9NYC9 4486 aa7.34□□□□□ -1.23
PSME4-201ENST00000389993 TNP1P09430 55 aa7.34□□□□□ -1.24
PSME4-201ENST00000389993 DNAH10Q8IVF4 4471 aa7.32□□□□□ -1.24
PSME4-201ENST00000389993 NDUFAF8A1L188 74 aa7.29□□□□□ -1.24
PSME4-201ENST00000389993 KRTAP4-5Q9BYR2 181 aa7.25□□□□□ -1.25
PSME4-201ENST00000389993 A0A0A0MQY5 61 aa7.23□□□□□ -1.25
PSME4-201ENST00000389993 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
PSME4-201ENST00000389993 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
PSME4-201ENST00000389993 DNAH1Q9P2D7 4330 aa7.17□□□□□ -1.26
PSME4-201ENST00000389993 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
PSME4-201ENST00000389993 LYSTQ99698 3801 aa7.09□□□□□ -1.27
PSME4-201ENST00000389993 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
PSME4-201ENST00000389993 KMT2AQ03164 3969 aa7.06□□□□□ -1.28
PSME4-201ENST00000389993 ANK2Q01484 3957 aa7.05□□□□□ -1.28
PSME4-201ENST00000389993 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
PSME4-201ENST00000389993 CMYA5Q8N3K9 4069 aa7.03□□□□□ -1.28
PSME4-201ENST00000389993 PRKDCP78527 4128 aaKnown RBP6.99□□□□□ -1.29
PSME4-201ENST00000389993 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
PSME4-201ENST00000389993 STARD9Q9P2P6 4700 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms