RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 CIRBP-AS1Q8TBR5 109 aa7.36□□□□□ -1.23
CAPRIN1-202ENST00000389645 IGLV8-61A0A075B6I0 122 aa7.35□□□□□ -1.23
CAPRIN1-202ENST00000389645 DNAH11Q96DT5 4516 aa7.35□□□□□ -1.23
CAPRIN1-202ENST00000389645 SPAG11AQ6PDA7 123 aa7.35□□□□□ -1.23
CAPRIN1-202ENST00000389645 SPACA4Q8TDM5 124 aa7.35□□□□□ -1.23
CAPRIN1-202ENST00000389645 A6NN06 94 aa7.34□□□□□ -1.23
CAPRIN1-202ENST00000389645 FRAS1Q86XX4 4008 aa7.33□□□□□ -1.24
CAPRIN1-202ENST00000389645 ATP11AUNQ6ZP68 121 aa7.33□□□□□ -1.24
CAPRIN1-202ENST00000389645 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
CAPRIN1-202ENST00000389645 DNAH8Q96JB1 4490 aa7.33□□□□□ -1.24
CAPRIN1-202ENST00000389645 FLG2Q5D862 2391 aaPredicted RBP7.32□□□□□ -1.24
CAPRIN1-202ENST00000389645 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
CAPRIN1-202ENST00000389645 C7orf65Q6ZTY9 151 aa7.32□□□□□ -1.24
CAPRIN1-202ENST00000389645 SPRR1BP22528 89 aa7.31□□□□□ -1.24
CAPRIN1-202ENST00000389645 DNAH5Q8TE73 4624 aa7.31□□□□□ -1.24
CAPRIN1-202ENST00000389645 ZCCHC13Q8WW36 166 aaKnown RBP7.31□□□□□ -1.24
CAPRIN1-202ENST00000389645 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
CAPRIN1-202ENST00000389645 SACSQ9NZJ4 4579 aa7.3□□□□□ -1.24
CAPRIN1-202ENST00000389645 FAT2Q9NYQ8 4349 aa7.3□□□□□ -1.24
CAPRIN1-202ENST00000389645 ALMS1Q8TCU4 4167 aa7.3□□□□□ -1.24
CAPRIN1-202ENST00000389645 ZNF861PO60384 105 aa7.28□□□□□ -1.24
CAPRIN1-202ENST00000389645 LIMD2Q9BT23 127 aa7.28□□□□□ -1.24
CAPRIN1-202ENST00000389645 SPINK7P58062 85 aa7.27□□□□□ -1.25
CAPRIN1-202ENST00000389645 LINC00313P59037 77 aa7.27□□□□□ -1.25
CAPRIN1-202ENST00000389645 PKD1P98161 4303 aa7.27□□□□□ -1.25
CAPRIN1-202ENST00000389645 KRTAP29-1A8MX34 341 aaPredicted RBP7.26□□□□□ -1.25
CAPRIN1-202ENST00000389645 CYP4F30PQ9H0H9 118 aa7.26□□□□□ -1.25
CAPRIN1-202ENST00000389645 MMP24-AS1A0A0U1RRL7 71 aa7.26□□□□□ -1.25
CAPRIN1-202ENST00000389645 KRTAP13-1Q8IUC0 172 aa7.25□□□□□ -1.25
CAPRIN1-202ENST00000389645 C8orf17Q9NRJ1 99 aa7.24□□□□□ -1.25
CAPRIN1-202ENST00000389645 LCE6AA0A183 80 aa7.23□□□□□ -1.25
CAPRIN1-202ENST00000389645 COA5Q86WW8 74 aa7.23□□□□□ -1.25
CAPRIN1-202ENST00000389645 PKHD1P08F94 4074 aa7.23□□□□□ -1.25
CAPRIN1-202ENST00000389645 CDC42SE1Q9NRR8 79 aa7.21□□□□□ -1.25
CAPRIN1-202ENST00000389645 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.26
CAPRIN1-202ENST00000389645 A0A087X002 238 aa7.21□□□□□ -1.26
CAPRIN1-202ENST00000389645 NOTCH2NLQ7Z3S9 236 aa7.21□□□□□ -1.26
CAPRIN1-202ENST00000389645 PLAC8Q9NZF1 115 aa7.21□□□□□ -1.26
CAPRIN1-202ENST00000389645 A0A1B0GVX0 72 aa7.21□□□□□ -1.26
CAPRIN1-202ENST00000389645 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
CAPRIN1-202ENST00000389645 LOC101927531A0A1B0GV80 90 aa7.2□□□□□ -1.26
CAPRIN1-202ENST00000389645 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
CAPRIN1-202ENST00000389645 Q75L30 129 aa7.2□□□□□ -1.26
CAPRIN1-202ENST00000389645 IGLV7-43P04211 117 aa7.2□□□□□ -1.26
CAPRIN1-202ENST00000389645 PRR26Q8N8Z3 221 aa7.18□□□□□ -1.26
CAPRIN1-202ENST00000389645 MRPL34Q9BQ48 92 aaKnown RBP7.18□□□□□ -1.26
CAPRIN1-202ENST00000389645 Q96NJ1 140 aa7.17□□□□□ -1.26
CAPRIN1-202ENST00000389645 H3BPC8 53 aa7.15□□□□□ -1.26
CAPRIN1-202ENST00000389645 LINC01554Q52M75 96 aa7.15□□□□□ -1.26
CAPRIN1-202ENST00000389645 TP53AIP1Q9HCN2 124 aa7.15□□□□□ -1.26
CAPRIN1-202ENST00000389645 SPINK1P00995 79 aa7.14□□□□□ -1.27
CAPRIN1-202ENST00000389645 LINC00483Q53H64 154 aa7.14□□□□□ -1.27
CAPRIN1-202ENST00000389645 RYR2Q92736 4967 aa7.1□□□□□ -1.27
CAPRIN1-202ENST00000389645 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
CAPRIN1-202ENST00000389645 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
CAPRIN1-202ENST00000389645 Q6ZSA8 131 aa7.08□□□□□ -1.28
CAPRIN1-202ENST00000389645 DYNC1H1Q14204 4646 aaKnown RBP7.08□□□□□ -1.28
CAPRIN1-202ENST00000389645 IGLV7-46A0A075B6I9 117 aa7.06□□□□□ -1.28
CAPRIN1-202ENST00000389645 Q5W150 140 aa7.06□□□□□ -1.28
CAPRIN1-202ENST00000389645 SSBP3-AS1Q7Z2R9 100 aa7.04□□□□□ -1.28
CAPRIN1-202ENST00000389645 IGKV2D-30A0A075B6S6 120 aa7.03□□□□□ -1.28
CAPRIN1-202ENST00000389645 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
CAPRIN1-202ENST00000389645 IGKV2-30P06310 120 aa7.03□□□□□ -1.28
CAPRIN1-202ENST00000389645 CSAG1Q6PB30 78 aa7.03□□□□□ -1.28
CAPRIN1-202ENST00000389645 FAT1Q14517 4588 aa7.03□□□□□ -1.28
CAPRIN1-202ENST00000389645 SMR3BP02814 79 aaPredicted RBP7.02□□□□□ -1.29
CAPRIN1-202ENST00000389645 LINC01558Q9Y6Z2 57 aa7.01□□□□□ -1.29
CAPRIN1-202ENST00000389645 RYR3Q15413 4870 aa7.01□□□□□ -1.29
CAPRIN1-202ENST00000389645 HRES1P13985 223 aa6.99□□□□□ -1.29
CAPRIN1-202ENST00000389645 TYMSOSQ8TAI1 123 aa6.99□□□□□ -1.29
CAPRIN1-202ENST00000389645 KRTAP13-2Q52LG2 175 aa6.98□□□□□ -1.29
CAPRIN1-202ENST00000389645 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
CAPRIN1-202ENST00000389645 ASB16-AS1Q495Z4 193 aa6.96□□□□□ -1.3
CAPRIN1-202ENST00000389645 APOBP04114 4563 aaKnown RBP6.96□□□□□ -1.3
CAPRIN1-202ENST00000389645 FAM229AH3BQW9 127 aa6.93□□□□□ -1.3
CAPRIN1-202ENST00000389645 ACYP2P14621 99 aa6.92□□□□□ -1.3
CAPRIN1-202ENST00000389645 KRTAP1-4P0C5Y4 121 aa6.89□□□□□ -1.31
CAPRIN1-202ENST00000389645 CRIPTQ9P021 101 aa6.89□□□□□ -1.31
CAPRIN1-202ENST00000389645 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
CAPRIN1-202ENST00000389645 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
CAPRIN1-202ENST00000389645 A0A1B0GU69 56 aa6.84□□□□□ -1.32
CAPRIN1-202ENST00000389645 Q8N1X5 172 aa6.83□□□□□ -1.32
CAPRIN1-202ENST00000389645 MIR22HGQ0VDD5 57 aa6.8□□□□□ -1.32
CAPRIN1-202ENST00000389645 KRTAP10-4P60372 401 aaPredicted RBP6.79□□□□□ -1.32
CAPRIN1-202ENST00000389645 HSPG2P98160 4391 aa6.78□□□□□ -1.32
CAPRIN1-202ENST00000389645 KRTAP13-3Q3SY46 172 aa6.78□□□□□ -1.32
CAPRIN1-202ENST00000389645 KIAA1109Q2LD37 5005 aa6.77□□□□□ -1.33
CAPRIN1-202ENST00000389645 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
CAPRIN1-202ENST00000389645 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
CAPRIN1-202ENST00000389645 LRP1Q07954 4544 aaKnown RBP6.76□□□□□ -1.33
CAPRIN1-202ENST00000389645 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
CAPRIN1-202ENST00000389645 KRTAP17-1Q9BYP8 105 aa6.72□□□□□ -1.33
CAPRIN1-202ENST00000389645 RYR1P21817 5038 aa6.71□□□□□ -1.33
CAPRIN1-202ENST00000389645 PKHD1L1Q86WI1 4243 aa6.71□□□□□ -1.34
CAPRIN1-202ENST00000389645 UQCR11O14957 56 aa6.7□□□□□ -1.34
CAPRIN1-202ENST00000389645 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
CAPRIN1-202ENST00000389645 ROMO1P60602 79 aa6.69□□□□□ -1.34
CAPRIN1-202ENST00000389645 Q5VSD8 79 aa6.68□□□□□ -1.34
CAPRIN1-202ENST00000389645 MYCBP2O75592 4640 aa6.66□□□□□ -1.34
CAPRIN1-202ENST00000389645 P0C880 135 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms