RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 KRTAP10-4P60372 401 aaPredicted RBP5.83□□□□□ -1.48
LTN1-203ENST00000389195 NDUFB1O75438 58 aa5.83□□□□□ -1.48
LTN1-203ENST00000389195 RYR1P21817 5038 aa5.83□□□□□ -1.48
LTN1-203ENST00000389195 CDK2AP2O75956 126 aa5.82□□□□□ -1.48
LTN1-203ENST00000389195 SSBP3-AS1Q7Z2R9 100 aa5.82□□□□□ -1.48
LTN1-203ENST00000389195 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
LTN1-203ENST00000389195 A0A1B0GVX0 72 aa5.81□□□□□ -1.48
LTN1-203ENST00000389195 C1orf195Q5TG92 126 aa5.81□□□□□ -1.48
LTN1-203ENST00000389195 LINC00208Q96KT6 92 aa5.81□□□□□ -1.48
LTN1-203ENST00000389195 FAT3Q8TDW7 4589 aa5.8□□□□□ -1.48
LTN1-203ENST00000389195 KLKP1Q107X0 134 aa5.8□□□□□ -1.48
LTN1-203ENST00000389195 A0A0U1RQV1 116 aa5.79□□□□□ -1.48
LTN1-203ENST00000389195 OXTP01178 125 aa5.79□□□□□ -1.48
LTN1-203ENST00000389195 C4orf48Q5BLP8 95 aa5.77□□□□□ -1.49
LTN1-203ENST00000389195 J3KT08 172 aa5.77□□□□□ -1.49
LTN1-203ENST00000389195 H0Y9P7 68 aa5.76□□□□□ -1.49
LTN1-203ENST00000389195 Q5W150 140 aa5.76□□□□□ -1.49
LTN1-203ENST00000389195 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
LTN1-203ENST00000389195 TNXBP22105 4242 aa5.76□□□□□ -1.49
LTN1-203ENST00000389195 PCOTHQ58A44 107 aa5.75□□□□□ -1.49
LTN1-203ENST00000389195 Q5VSD8 79 aa5.75□□□□□ -1.49
LTN1-203ENST00000389195 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
LTN1-203ENST00000389195 TMEM258P61165 79 aa5.74□□□□□ -1.49
LTN1-203ENST00000389195 FAM236DA0A1B0GTK5 79 aa5.73□□□□□ -1.49
LTN1-203ENST00000389195 C9orf92A6NGG3 77 aa5.73□□□□□ -1.49
LTN1-203ENST00000389195 FAM236CP0DP71 79 aa5.73□□□□□ -1.49
LTN1-203ENST00000389195 MRPL34Q9BQ48 92 aaKnown RBP5.73□□□□□ -1.49
LTN1-203ENST00000389195 CD164Q04900 197 aa5.73□□□□□ -1.49
LTN1-203ENST00000389195 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
LTN1-203ENST00000389195 C1orf64Q8NEQ6 169 aa5.72□□□□□ -1.49
LTN1-203ENST00000389195 LINC00313P59037 77 aa5.72□□□□□ -1.49
LTN1-203ENST00000389195 C5orf47Q569G3 176 aa5.72□□□□□ -1.49
LTN1-203ENST00000389195 ASB16-AS1Q495Z4 193 aa5.71□□□□□ -1.5
LTN1-203ENST00000389195 ZCCHC13Q8WW36 166 aaKnown RBP5.71□□□□□ -1.5
LTN1-203ENST00000389195 MP68P56378 58 aa5.7□□□□□ -1.5
LTN1-203ENST00000389195 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
LTN1-203ENST00000389195 Q8N1X5 172 aa5.7□□□□□ -1.5
LTN1-203ENST00000389195 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
LTN1-203ENST00000389195 SPINK1P00995 79 aa5.68□□□□□ -1.5
LTN1-203ENST00000389195 KRTAP4-5Q9BYR2 181 aa5.68□□□□□ -1.5
LTN1-203ENST00000389195 LIMD2Q9BT23 127 aa5.66□□□□□ -1.5
LTN1-203ENST00000389195 Q8N9P0 234 aaPredicted RBP5.65□□□□□ -1.51
LTN1-203ENST00000389195 LPAP08519 4548 aa5.64□□□□□ -1.51
LTN1-203ENST00000389195 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
LTN1-203ENST00000389195 NDUFC1O43677 76 aa5.62□□□□□ -1.51
LTN1-203ENST00000389195 Q5XG85 94 aa5.62□□□□□ -1.51
LTN1-203ENST00000389195 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
LTN1-203ENST00000389195 IGKV2D-30A0A075B6S6 120 aa5.6□□□□□ -1.51
LTN1-203ENST00000389195 IGKV2-30P06310 120 aa5.6□□□□□ -1.51
LTN1-203ENST00000389195 C4orf26Q17RF5 130 aa5.6□□□□□ -1.51
LTN1-203ENST00000389195 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
LTN1-203ENST00000389195 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.51
LTN1-203ENST00000389195 LRP2P98164 4655 aa5.58□□□□□ -1.52
LTN1-203ENST00000389195 C8orf87E5RJ46 101 aa5.58□□□□□ -1.52
LTN1-203ENST00000389195 SERP1Q9Y6X1 66 aa5.57□□□□□ -1.52
LTN1-203ENST00000389195 FP248Q71RG6 208 aaPredicted RBP5.57□□□□□ -1.52
LTN1-203ENST00000389195 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
LTN1-203ENST00000389195 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
LTN1-203ENST00000389195 CYP4F30PQ9H0H9 118 aa5.56□□□□□ -1.52
LTN1-203ENST00000389195 HERC2O95714 4834 aa5.55□□□□□ -1.52
LTN1-203ENST00000389195 RPS28P62857 69 aaKnown RBP5.55□□□□□ -1.52
LTN1-203ENST00000389195 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
LTN1-203ENST00000389195 HRES1P13985 223 aa5.52□□□□□ -1.53
LTN1-203ENST00000389195 H3BPC8 53 aa5.5□□□□□ -1.53
LTN1-203ENST00000389195 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
LTN1-203ENST00000389195 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
LTN1-203ENST00000389195 RPS29P62273 56 aaKnown RBP5.48□□□□□ -1.53
LTN1-203ENST00000389195 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
LTN1-203ENST00000389195 MUC2Q02817 5179 aa5.47□□□□□ -1.53
LTN1-203ENST00000389195 COA5Q86WW8 74 aa5.47□□□□□ -1.53
LTN1-203ENST00000389195 PSPHP1O15172 72 aa5.47□□□□□ -1.53
LTN1-203ENST00000389195 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
LTN1-203ENST00000389195 HERC1Q15751 4861 aa5.46□□□□□ -1.54
LTN1-203ENST00000389195 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
LTN1-203ENST00000389195 SPANXA2-OT1Q8N9U9 137 aa5.45□□□□□ -1.54
LTN1-203ENST00000389195 BIRC6Q9NR09 4857 aa5.42□□□□□ -1.54
LTN1-203ENST00000389195 A8MUU9 505 aa5.41□□□□□ -1.54
LTN1-203ENST00000389195 C20orf166-AS1Q96NR2 134 aa5.41□□□□□ -1.54
LTN1-203ENST00000389195 SPINK7P58062 85 aa5.4□□□□□ -1.55
LTN1-203ENST00000389195 C7orf65Q6ZTY9 151 aa5.39□□□□□ -1.55
LTN1-203ENST00000389195 A8MUN3 132 aa5.39□□□□□ -1.55
LTN1-203ENST00000389195 XP32Q5T750 250 aa5.39□□□□□ -1.55
LTN1-203ENST00000389195 A8MU10 97 aa5.36□□□□□ -1.55
LTN1-203ENST00000389195 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
LTN1-203ENST00000389195 DMAC1Q96GE9 116 aa5.34□□□□□ -1.55
LTN1-203ENST00000389195 CHKB-CPT1BH3BT56 60 aa5.33□□□□□ -1.56
LTN1-203ENST00000389195 ATP11AUNQ6ZP68 121 aa5.33□□□□□ -1.56
LTN1-203ENST00000389195 ACYP2P14621 99 aa5.33□□□□□ -1.56
LTN1-203ENST00000389195 PRR15LQ9BU68 103 aa5.33□□□□□ -1.56
LTN1-203ENST00000389195 Q75L30 129 aa5.32□□□□□ -1.56
LTN1-203ENST00000389195 J3QL48 77 aa5.32□□□□□ -1.56
LTN1-203ENST00000389195 Q1T7F1 81 aa5.3□□□□□ -1.56
LTN1-203ENST00000389195 BRK1Q8WUW1 75 aa5.3□□□□□ -1.56
LTN1-203ENST00000389195 RPL37P61927 97 aaKnown RBP5.29□□□□□ -1.56
LTN1-203ENST00000389195 Q5VV11 94 aa5.28□□□□□ -1.56
LTN1-203ENST00000389195 RNF213Q63HN8 5207 aa5.24□□□□□ -1.57
LTN1-203ENST00000389195 SVIPQ8NHG7 77 aa5.22□□□□□ -1.57
LTN1-203ENST00000389195 LINC01558Q9Y6Z2 57 aa5.19□□□□□ -1.58
LTN1-203ENST00000389195 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
LTN1-203ENST00000389195 A6NED7 52 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 332.5 ms