RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 A0A087X002 238 aa7.38□□□□□ -1.23
SF1-204ENST00000377390 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
SF1-204ENST00000377390 DMBT1Q9UGM3 2413 aaPredicted RBP7.37□□□□□ -1.23
SF1-204ENST00000377390 A0A1B0GVX0 72 aa7.37□□□□□ -1.23
SF1-204ENST00000377390 SPINK1P00995 79 aa7.37□□□□□ -1.23
SF1-204ENST00000377390 NBDYA0A0U1RRE5 68 aa7.36□□□□□ -1.23
SF1-204ENST00000377390 CSAG1Q6PB30 78 aa7.36□□□□□ -1.23
SF1-204ENST00000377390 ACYP2P14621 99 aa7.33□□□□□ -1.24
SF1-204ENST00000377390 APLNQ9ULZ1 77 aa7.33□□□□□ -1.24
SF1-204ENST00000377390 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.33□□□□□ -1.24
SF1-204ENST00000377390 IGLV5-52A0A0A0MRZ9 124 aa7.32□□□□□ -1.24
SF1-204ENST00000377390 MIR22HGQ0VDD5 57 aa7.31□□□□□ -1.24
SF1-204ENST00000377390 NUPR2A6NF83 97 aa7.3□□□□□ -1.24
SF1-204ENST00000377390 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
SF1-204ENST00000377390 SPRR1BP22528 89 aa7.29□□□□□ -1.24
SF1-204ENST00000377390 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
SF1-204ENST00000377390 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
SF1-204ENST00000377390 Q5W150 140 aa7.28□□□□□ -1.24
SF1-204ENST00000377390 RTL8CO15255 209 aa7.27□□□□□ -1.25
SF1-204ENST00000377390 C1orf134Q5TEV5 83 aa7.27□□□□□ -1.25
SF1-204ENST00000377390 UQCR11O14957 56 aa7.26□□□□□ -1.25
SF1-204ENST00000377390 ZNF706Q9Y5V0 76 aaPredicted RBP7.26□□□□□ -1.25
SF1-204ENST00000377390 HUWE1Q7Z6Z7 4374 aaKnown RBP7.25□□□□□ -1.25
SF1-204ENST00000377390 Q6ZR54 194 aa7.25□□□□□ -1.25
SF1-204ENST00000377390 Q96NJ1 140 aa7.24□□□□□ -1.25
SF1-204ENST00000377390 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
SF1-204ENST00000377390 CRIPTQ9P021 101 aa7.21□□□□□ -1.25
SF1-204ENST00000377390 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.26
SF1-204ENST00000377390 A0A087WTM6 91 aa7.21□□□□□ -1.26
SF1-204ENST00000377390 PLA2G1BP04054 148 aaKnown RBP7.21□□□□□ -1.26
SF1-204ENST00000377390 PLAC8Q9NZF1 115 aa7.2□□□□□ -1.26
SF1-204ENST00000377390 DNAH7Q8WXX0 4024 aa7.19□□□□□ -1.26
SF1-204ENST00000377390 WWC2-AS2Q96NR7 200 aa7.18□□□□□ -1.26
SF1-204ENST00000377390 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
SF1-204ENST00000377390 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
SF1-204ENST00000377390 ZNF861PO60384 105 aa7.16□□□□□ -1.26
SF1-204ENST00000377390 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
SF1-204ENST00000377390 FAM229AH3BQW9 127 aa7.11□□□□□ -1.27
SF1-204ENST00000377390 KMT2AQ03164 3969 aa7.11□□□□□ -1.27
SF1-204ENST00000377390 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
SF1-204ENST00000377390 CMYA5Q8N3K9 4069 aa7.1□□□□□ -1.27
SF1-204ENST00000377390 SPATA8Q6RVD6 105 aa7.1□□□□□ -1.27
SF1-204ENST00000377390 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
SF1-204ENST00000377390 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
SF1-204ENST00000377390 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
SF1-204ENST00000377390 Q8N1X5 172 aa7.09□□□□□ -1.27
SF1-204ENST00000377390 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
SF1-204ENST00000377390 SSBP3-AS1Q7Z2R9 100 aa7.05□□□□□ -1.28
SF1-204ENST00000377390 LINC00483Q53H64 154 aa7.04□□□□□ -1.28
SF1-204ENST00000377390 IGLV7-43P04211 117 aa7.03□□□□□ -1.28
SF1-204ENST00000377390 FRAS1Q86XX4 4008 aa7.02□□□□□ -1.29
SF1-204ENST00000377390 KRTAP10-1P60331 282 aa7□□□□□ -1.29
SF1-204ENST00000377390 Q6ZRN7 208 aaPredicted RBP7□□□□□ -1.29
SF1-204ENST00000377390 SPINT4Q6UDR6 99 aa6.94□□□□□ -1.3
SF1-204ENST00000377390 DNAH11Q96DT5 4516 aa6.93□□□□□ -1.3
SF1-204ENST00000377390 ROMO1P60602 79 aa6.93□□□□□ -1.3
SF1-204ENST00000377390 C9orf92A6NGG3 77 aa6.93□□□□□ -1.3
SF1-204ENST00000377390 KRTAP13-3Q3SY46 172 aa6.92□□□□□ -1.3
SF1-204ENST00000377390 K7ERS5 55 aa6.91□□□□□ -1.3
SF1-204ENST00000377390 KRTAP25-1Q3LHN0 102 aa6.89□□□□□ -1.31
SF1-204ENST00000377390 TYMSOSQ8TAI1 123 aa6.86□□□□□ -1.31
SF1-204ENST00000377390 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
SF1-204ENST00000377390 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
SF1-204ENST00000377390 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
SF1-204ENST00000377390 A0A1B0GU33 70 aa6.84□□□□□ -1.31
SF1-204ENST00000377390 LINC00304Q8N9R0 145 aa6.84□□□□□ -1.31
SF1-204ENST00000377390 A8MUU9 505 aa6.84□□□□□ -1.31
SF1-204ENST00000377390 KRTAP13-2Q52LG2 175 aa6.82□□□□□ -1.32
SF1-204ENST00000377390 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
SF1-204ENST00000377390 A0A0D9SG42 100 aa6.81□□□□□ -1.32
SF1-204ENST00000377390 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
SF1-204ENST00000377390 Q6ZSA8 131 aa6.8□□□□□ -1.32
SF1-204ENST00000377390 H0YAA0 97 aa6.79□□□□□ -1.32
SF1-204ENST00000377390 FAT1Q14517 4588 aa6.79□□□□□ -1.32
SF1-204ENST00000377390 DNAH3Q8TD57 4116 aa6.76□□□□□ -1.33
SF1-204ENST00000377390 DNAH2Q9P225 4427 aa6.74□□□□□ -1.33
SF1-204ENST00000377390 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
SF1-204ENST00000377390 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
SF1-204ENST00000377390 PKHD1P08F94 4074 aa6.71□□□□□ -1.33
SF1-204ENST00000377390 LRP1BQ9NZR2 4599 aa6.71□□□□□ -1.33
SF1-204ENST00000377390 P0C880 135 aa6.7□□□□□ -1.34
SF1-204ENST00000377390 DNAH17Q9UFH2 4485 aa6.68□□□□□ -1.34
SF1-204ENST00000377390 KMT2CQ8NEZ4 4911 aaKnown RBP6.67□□□□□ -1.34
SF1-204ENST00000377390 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
SF1-204ENST00000377390 C10orf95Q9H7T3 257 aa6.65□□□□□ -1.35
SF1-204ENST00000377390 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
SF1-204ENST00000377390 MYCBP2O75592 4640 aa6.64□□□□□ -1.35
SF1-204ENST00000377390 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
SF1-204ENST00000377390 ALMS1Q8TCU4 4167 aa6.61□□□□□ -1.35
SF1-204ENST00000377390 FAT3Q8TDW7 4589 aa6.59□□□□□ -1.35
SF1-204ENST00000377390 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
SF1-204ENST00000377390 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
SF1-204ENST00000377390 KIAA1109Q2LD37 5005 aa6.55□□□□□ -1.36
SF1-204ENST00000377390 FAT2Q9NYQ8 4349 aa6.54□□□□□ -1.36
SF1-204ENST00000377390 VPS13BQ7Z7G8 4022 aa6.54□□□□□ -1.36
SF1-204ENST00000377390 Q5VSD8 79 aa6.53□□□□□ -1.36
SF1-204ENST00000377390 LRP1Q07954 4544 aaKnown RBP6.52□□□□□ -1.37
SF1-204ENST00000377390 RPL37P61927 97 aaKnown RBP6.52□□□□□ -1.37
SF1-204ENST00000377390 C20orf166-AS1Q96NR2 134 aa6.51□□□□□ -1.37
SF1-204ENST00000377390 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms