RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 IGKV4-1P06312 121 aa5.41□□□□□ -1.54
UBR4-201ENST00000375218 LINC00959A0A1B0GUT2 108 aa5.41□□□□□ -1.54
UBR4-201ENST00000375218 TRBV6-4A0A1B0GX49 114 aa5.41□□□□□ -1.54
UBR4-201ENST00000375218 FAM168BA1KXE4 195 aa5.4□□□□□ -1.54
UBR4-201ENST00000375218 A0A096LPF7 62 aa5.4□□□□□ -1.55
UBR4-201ENST00000375218 ETDCA0A1B0GVM5 59 aa5.4□□□□□ -1.55
UBR4-201ENST00000375218 M0QY20 66 aa5.4□□□□□ -1.55
UBR4-201ENST00000375218 Q8N9L7 120 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 IGLV4-60A0A075B6I1 120 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 SPRR4Q96PI1 79 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 SSBP3-AS1Q7Z2R9 100 aa5.39□□□□□ -1.55
UBR4-201ENST00000375218 EPPK1P58107 5090 aaKnown RBP5.38□□□□□ -1.55
UBR4-201ENST00000375218 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
UBR4-201ENST00000375218 POLR2KP53803 58 aaKnown RBP5.38□□□□□ -1.55
UBR4-201ENST00000375218 CLPSL2Q6UWE3 100 aa5.38□□□□□ -1.55
UBR4-201ENST00000375218 R4GN34 69 aa5.38□□□□□ -1.55
UBR4-201ENST00000375218 KRTAP15-1Q3LI76 137 aa5.37□□□□□ -1.55
UBR4-201ENST00000375218 A0A087WTM6 91 aa5.36□□□□□ -1.55
UBR4-201ENST00000375218 LCE6AA0A183 80 aa5.35□□□□□ -1.55
UBR4-201ENST00000375218 LINC00612Q8N6U2 182 aa5.35□□□□□ -1.55
UBR4-201ENST00000375218 NBDYA0A0U1RRE5 68 aa5.35□□□□□ -1.55
UBR4-201ENST00000375218 COX7BP24311 80 aa5.35□□□□□ -1.55
UBR4-201ENST00000375218 APOBP04114 4563 aaKnown RBP5.35□□□□□ -1.55
UBR4-201ENST00000375218 CDKN2A-AS1Q9UH64 79 aa5.35□□□□□ -1.55
UBR4-201ENST00000375218 RPL37AP61513 92 aaKnown RBP5.34□□□□□ -1.55
UBR4-201ENST00000375218 Q6ZQY7 126 aa5.33□□□□□ -1.56
UBR4-201ENST00000375218 ST20-AS1Q8NBB2 130 aa5.33□□□□□ -1.56
UBR4-201ENST00000375218 A0A0G2JQZ4 141 aa5.33□□□□□ -1.56
UBR4-201ENST00000375218 DEFB4AO15263 64 aa5.33□□□□□ -1.56
UBR4-201ENST00000375218 LINC00308Q8TCZ7 52 aa5.32□□□□□ -1.56
UBR4-201ENST00000375218 FLG2Q5D862 2391 aaPredicted RBP5.32□□□□□ -1.56
UBR4-201ENST00000375218 LCE2BO14633 110 aa5.32□□□□□ -1.56
UBR4-201ENST00000375218 ACYP2P14621 99 aa5.32□□□□□ -1.56
UBR4-201ENST00000375218 LINC00472Q9H8W2 130 aa5.31□□□□□ -1.56
UBR4-201ENST00000375218 ANGP03950 147 aaKnown RBP5.31□□□□□ -1.56
UBR4-201ENST00000375218 Q96NJ1 140 aa5.3□□□□□ -1.56
UBR4-201ENST00000375218 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
UBR4-201ENST00000375218 DEFB135Q30KP9 77 aa5.29□□□□□ -1.56
UBR4-201ENST00000375218 LOC110117498A0A087WWA1 95 aa5.27□□□□□ -1.57
UBR4-201ENST00000375218 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
UBR4-201ENST00000375218 FAT1Q14517 4588 aa5.26□□□□□ -1.57
UBR4-201ENST00000375218 SMIM11BQ8TCY0 68 aa5.26□□□□□ -1.57
UBR4-201ENST00000375218 DYNC1H1Q14204 4646 aaKnown RBP5.26□□□□□ -1.57
UBR4-201ENST00000375218 A0A1B0GUV1 79 aa5.26□□□□□ -1.57
UBR4-201ENST00000375218 M0R2N4 97 aa5.26□□□□□ -1.57
UBR4-201ENST00000375218 HSPG2P98160 4391 aa5.25□□□□□ -1.57
UBR4-201ENST00000375218 COX6A2Q02221 97 aa5.25□□□□□ -1.57
UBR4-201ENST00000375218 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
UBR4-201ENST00000375218 NDUFA1O15239 70 aa5.23□□□□□ -1.57
UBR4-201ENST00000375218 PRO0255Q9UI72 69 aa5.23□□□□□ -1.57
UBR4-201ENST00000375218 KCNQ1DNQ9H478 68 aa5.22□□□□□ -1.57
UBR4-201ENST00000375218 A0A0J9YWU9 116 aa5.22□□□□□ -1.57
UBR4-201ENST00000375218 MYCBP2O75592 4640 aa5.22□□□□□ -1.57
UBR4-201ENST00000375218 A0A1W2PNN7 141 aa5.21□□□□□ -1.58
UBR4-201ENST00000375218 TNXBP22105 4242 aa5.21□□□□□ -1.58
UBR4-201ENST00000375218 SPART-AS1P0CW21 52 aa5.2□□□□□ -1.58
UBR4-201ENST00000375218 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
UBR4-201ENST00000375218 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
UBR4-201ENST00000375218 LRP1Q07954 4544 aaKnown RBP5.19□□□□□ -1.58
UBR4-201ENST00000375218 K7EIL1 84 aa5.18□□□□□ -1.58
UBR4-201ENST00000375218 C14orf177Q52M58 125 aa5.18□□□□□ -1.58
UBR4-201ENST00000375218 IGKV2D-24A0A075B6R9 120 aa5.17□□□□□ -1.58
UBR4-201ENST00000375218 COX17Q14061 63 aa5.17□□□□□ -1.58
UBR4-201ENST00000375218 HRES1P13985 223 aa5.16□□□□□ -1.58
UBR4-201ENST00000375218 SPACA4Q8TDM5 124 aa5.16□□□□□ -1.58
UBR4-201ENST00000375218 LPAP08519 4548 aa5.16□□□□□ -1.58
UBR4-201ENST00000375218 KRTAP1-5Q9BYS1 174 aa5.14□□□□□ -1.59
UBR4-201ENST00000375218 IGLV6-57P01721 117 aa5.14□□□□□ -1.59
UBR4-201ENST00000375218 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
UBR4-201ENST00000375218 KRTAP7-1Q8IUC3 87 aa5.13□□□□□ -1.59
UBR4-201ENST00000375218 DEFB105AQ8NG35 78 aa5.12□□□□□ -1.59
UBR4-201ENST00000375218 RYR1P21817 5038 aa5.11□□□□□ -1.59
UBR4-201ENST00000375218 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
UBR4-201ENST00000375218 UBE2DNLQ8IWF7 75 aa5.1□□□□□ -1.59
UBR4-201ENST00000375218 UNQ6190/PRO20217Q6UXQ8 127 aa5.09□□□□□ -1.59
UBR4-201ENST00000375218 KRTAP17-1Q9BYP8 105 aa5.09□□□□□ -1.59
UBR4-201ENST00000375218 IGKV2-28A0A075B6P5 120 aa5.09□□□□□ -1.59
UBR4-201ENST00000375218 IGKV2D-28P01615 120 aa5.09□□□□□ -1.59
UBR4-201ENST00000375218 Q8IZM0 81 aa5.09□□□□□ -1.6
UBR4-201ENST00000375218 LINC00575Q6W349 94 aa5.07□□□□□ -1.6
UBR4-201ENST00000375218 LELP1Q5T871 98 aa5.07□□□□□ -1.6
UBR4-201ENST00000375218 DEFB131BA0A096LNP1 70 aa5.07□□□□□ -1.6
UBR4-201ENST00000375218 KIAA1109Q2LD37 5005 aa5.05□□□□□ -1.6
UBR4-201ENST00000375218 KRTAP11-1Q8IUC1 163 aa5.05□□□□□ -1.6
UBR4-201ENST00000375218 PSORS1C2Q9UIG4 136 aa5.05□□□□□ -1.6
UBR4-201ENST00000375218 WFDC13Q8IUB5 93 aa5.04□□□□□ -1.6
UBR4-201ENST00000375218 LORP23490 312 aaPredicted RBP5.04□□□□□ -1.6
UBR4-201ENST00000375218 WFDC10BQ8IUB3 73 aa5.03□□□□□ -1.6
UBR4-201ENST00000375218 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
UBR4-201ENST00000375218 IGKV2-24A0A0C4DH68 120 aa5.01□□□□□ -1.61
UBR4-201ENST00000375218 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
UBR4-201ENST00000375218 Q6ZRX8 168 aa5□□□□□ -1.61
UBR4-201ENST00000375218 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
UBR4-201ENST00000375218 IGKV2D-30A0A075B6S6 120 aa4.94□□□□□ -1.62
UBR4-201ENST00000375218 K7EQZ3 153 aa4.94□□□□□ -1.62
UBR4-201ENST00000375218 C6orf48Q9UBA6 75 aa4.94□□□□□ -1.62
UBR4-201ENST00000375218 A0A096LNI7 61 aa4.94□□□□□ -1.62
UBR4-201ENST00000375218 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms